Pseudomonas izuensis: LAB08_R49440
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Entry
LAB08_R49440 CDS
T08555
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
piz
Pseudomonas izuensis
Pathway
piz01501
beta-Lactam resistance
piz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LAB08_R49440
01503 Cationic antimicrobial peptide (CAMP) resistance
LAB08_R49440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
piz03036
]
LAB08_R49440
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
piz02000
]
LAB08_R49440
01504 Antimicrobial resistance genes [BR:
piz01504
]
LAB08_R49440
Chromosome and associated proteins [BR:
piz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LAB08_R49440
Transporters [BR:
piz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LAB08_R49440
Antimicrobial resistance genes [BR:
piz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LAB08_R49440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
Beta-barrel_RND
HH_MFP_RND
BSH_CzcB
YknX_C
Biotin_lipoyl
RND-MFP_C
BSH_YhbJ
BSH_YknX
CzcB_C
BSH_LcnD
RnfC_N
BSH_CusB
Beta-barrel_YknX
HH_EMRA
Beta-barrel_AprE
PTS_EIIA_1
SPATA6
PASTA
Motif
Other DBs
NCBI-ProteinID:
BCX70277
UniProt:
A0ABM7S0E0
LinkDB
All DBs
Position
5542249..5543397
Genome browser
AA seq
382 aa
AA seq
DB search
MLRRRMLIMLGVVLLIVLVLAGYKAFSIYTMIQGFSKPKPPISVAVATATEQPWQARLPT
VGTLKALQGVDLSLETDGTVVDVQFESGQKVKAGQPIVRLDSAVESALLETALADLGLAQ
VDYTRGSQLVGSQAISKGEFDRLSAVLKKSKATVNQLKAALGKKSILAPFSGTIGIRQVD
VGDYVATGTMIATLQDLSSLYVDFFVPEQSVPKIAVGQPVQIIVAAFPTEEFPGTISAIN
PKVENSTRNVQVRATLANPDGKLLPGMFASLQVILPDPQRRIVVPESAITYTLYGNSVYV
AVQKKAEDGSVEKDDKGQPVLIAERRFVETGERRTGVVMITKGLQNGETVVTAGQIKLDN
GAHIAISDDKTLSEKNSRPRAD
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtcgccgcatgctgatcatgttgggggtagttctgctgatcgtgctggtgctg
gccgggtacaaagccttctccatctacacgatgatccaaggcttctccaagccgaaacca
ccgatcagtgtcgccgtggccacggccaccgaacagccgtggcaggcgcgcctgcctacg
gttggcaccctcaaggcactgcaaggtgtggatctgagcctggagaccgatggcaccgtc
gtcgatgtgcagttcgagtcgggacagaaggtcaaggccggccaacccatcgtccggctc
gacagcgccgtggaaagtgccctgctcgaaaccgccctcgccgacctcgggctggcccag
gtggactacacccgcggcagtcaactggtgggcagccaggccatttccaaaggcgagttc
gaccgactctcggcggtattgaaaaagagcaaggccaccgtcaaccagctcaaggctgcg
cttggcaaaaaaagcatcctcgcgcccttcagcgggaccatcggcattcgccaggtcgat
gtcggcgactacgtggccaccggcaccatgatcgctaccctgcaagacctcagcagcctc
tacgtcgattttttcgtgcccgagcaatcggtgccgaagatcgccgttggccagccggtg
cagatcatcgtcgcggcgtttccgacggaggaattccccggcaccatcagtgcaatcaac
ccgaaagtcgagaacagcacgcgcaacgtgcaggtccgcgcaaccctggccaaccccgat
ggcaaattactccccgggatgttcgccagcctgcaggtgattttgcccgacccgcagcgg
cgcatcgtcgtgcctgaaagcgcgatcacctacacgctctacggcaactcggtctatgtc
gccgtccaaaagaaagccgaagacggtagcgtggaaaaagacgacaagggccaacctgtc
ctgatcgccgagcggcgtttcgtcgaaaccggcgagcgccgcacgggcgtggtgatgatc
accaaaggcctgcagaacggcgaaacggtagtgactgccggccagatcaaactggacaac
ggtgcgcacatcgccatcagcgacgacaagacgctgtccgaaaagaacagccggccacgc
gctgactga
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