Penaeus japonicus (kuruma prawn): 122259149
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Entry
122259149 CDS
T07703
Name
(RefSeq) TNF receptor-associated factor 6-A-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja04120
Ubiquitin mediated proteolysis
pja04140
Autophagy - animal
pja04144
Endocytosis
pja04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122259149
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122259149
04140 Autophagy - animal
122259149
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
122259149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pja04131
]
122259149
04121 Ubiquitin system [BR:
pja04121
]
122259149
Enzymes [BR:
pja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122259149
Membrane trafficking [BR:
pja04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
122259149
Ubiquitin system [BR:
pja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
122259149
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
TRAF3_RING
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-TRAF_2
zf-RING_5
Sina_ZnF
RING_XB3-XBAT31
zf-RING_6
DUF5740
zf-Nse
Motif
Other DBs
NCBI-GeneID:
122259149
NCBI-ProteinID:
XP_042881661
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MESVEESITILSRREGFDYEFVPPLDPKYECAICLLGLRSPIQTTCGHRFCKDCIFNCMS
ESSSRCPVDNTPLTEADLFPDSCAEREILQLSVKCPNHGLGCRRTVDLMYIEHHTQACSF
QPVMCPNECSATVLRKEVEQHLSSECVLRVKKCALCEQPFTFNQEQLHLLSCVRVTVPCE
MCGAMMPRGEVAGHMTETCPKVVVACTFAEHGCHHKMTRADLSQHMSQATQLHLQLLSSA
YKKINTFVSDLSRTVGLIQSPFGNFSRQPSLRSQISATSPIPENHTSPSLPERTLEKSLG
ATGGALGCNEKSGVFSSPQSGDKGGADSGIEVNKLHLQLNQMGIEGISKSPSSKSLSTVT
HQEIILRDLCEKSVDLNQRMLEETIKLSNLAKRIEEVDALVEAQLMEMSGKYCNGDYVWR
IKNFSQFCAELQSKPGRVCHSPSFYTSQFGYKFCLRTNITWKSEQYFLTLFIHGMQSEND
DFLDWPFNGRITLSVLDCDTLLPKNHITETMVTKPGLQAFKRPEVARNPKGFGFTEFVPL
AKILQPNVGTFLKNDTLCIRATVCPTAWNCENNQSTEKLGIYKDKLHIEKQSCM
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgttgaagagtccatcacaattttgtctcgacgagagggatttgattacgaa
tttgtccctccgcttgaccctaagtatgagtgtgccatatgtctactgggcttgcgctct
cccatacaaactacatgtggtcatcgcttttgtaaagattgcatctttaattgtatgagt
gagagcagcagtcgttgtccagttgacaatactcccctcacagaagctgatttattcccc
gactcgtgtgctgaacgtgagatcctgcagcttagtgtgaagtgtccaaatcatggcttg
ggctgtaggagaacagttgacttgatgtatatagagcatcatactcaggcttgttcattt
cagccagtcatgtgccccaacgaatgctcagcaacagtgttacggaaagaagttgaacag
cacctgagctcagaatgtgtcctgcgggtaaagaaatgcgctctttgcgaacagcctttt
actttcaatcaggagcaactgcatttactgagctgtgtgcgtgtgaccgtcccatgtgaa
atgtgtggagctatgatgccacgtggggaggttgcagggcacatgacagagacatgccca
aaggtggtggtggcttgcacttttgctgaacacggctgccatcacaagatgactcgagct
gatttgagccagcacatgtcacaagccacgcagctacatctgcagcttttatcttcagca
tacaagaagatcaatacttttgtgtcagatcttagtcgtacagtaggtcttattcagtct
ccatttggaaacttcagtcgacagccaagtttacgcagccaaatatcagcaacatctccc
atcccagagaatcacactagtccatcacttccggaaagaaccctagaaaagtctttgggt
gcgactggaggagcattaggctgtaatgagaaatcaggtgtcttttcctctcctcagtct
ggggacaaaggaggtgctgactcagggattgaagtgaacaaacttcacctacagctaaac
cagatgggtatagaaggaataagcaagagtccttcttctaaatctttgtccactgtgact
catcaggaaattattttaagagatctgtgtgagaagagtgtagatttgaatcaaaggatg
cttgaagaaaccatcaaattaagtaatttagcaaaaagaattgaagaagttgatgccctt
gttgaagctcagctgatggaaatgagtgggaaatattgtaatggtgattatgtgtggaga
attaaaaatttctcccagttttgtgctgaattacaaagtaaaccaggaagggtatgtcac
agcccatcattctacacatctcagtttgggtacaagttttgccttcgaacaaatatcaca
tggaagtctgaacagtatttcttaactctatttattcatggaatgcaaagcgagaatgac
gattttcttgactggcctttcaatggacgcataacgctttctgtactagactgtgatacg
ttattaccaaaaaatcacatcacagagaccatggtaactaaaccaggtcttcaggctttc
aaacgccccgaagttgctcgcaatccgaaaggatttggattcacagaatttgtgccactt
gcaaaaatacttcaacccaatgtgggaactttcctcaaaaatgatactctgtgcattaga
gcaactgtgtgccctaccgcctggaactgcgagaataatcaaagcacggaaaagttagga
atttataaggacaagcttcatattgagaaacaaagctgcatgtaa
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integrated database retrieval system
