Paenibacillus sp. JDR-2: Pjdr2_1885
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Entry
Pjdr2_1885 CDS
T00977
Name
(GenBank) major facilitator superfamily MFS_1
KO
K08168
MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
Organism
pjd
Paenibacillus sp. JDR-2
Module
pjd_M00704
Tetracycline resistance, efflux pump Tet38
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pjd02000
]
Pjdr2_1885
01504 Antimicrobial resistance genes [BR:
pjd01504
]
Pjdr2_1885
Transporters [BR:
pjd02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-2 (14 spanner) (DHA2) family [TC:
2.A.1.3
]
Pjdr2_1885
Antimicrobial resistance genes [BR:
pjd01504
]
Gene variants
Tetracycline resistance genes
Transporters
Pjdr2_1885
Gene sets
Vancomycin resistance modules
Tetracycline resistance, efflux pump Tet38 [MD:
M00704
]
Pjdr2_1885
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MFS_1
OATP
Mim2
Motif
Other DBs
NCBI-ProteinID:
ACT00542
LinkDB
All DBs
Position
2228709..2230049
Genome browser
AA seq
446 aa
AA seq
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MNDRIVMPVWMLGLFVVVMNTTMFNVSVPSIINDLGITSDLGSWIVSSYSIGYALSTVIY
SRLSDIAPIRRLVAVGLLILGLSSVLGIFAHNFALLLTARILQSAGAGTMAGLGLVLASR
YIPVERRGRAISMIAAGSAMAFGLGPIVGGVISEYFGWNGLFVVTCLVLVILPVLLKLLP
KENPQPASFDYWGAAWTVINATSLLIAVTQQSVIWLLASVITIVIHVLHIRKAQGNGTFV
NPEVFRQPGYIRLLVVGFCLLIINLGNLFLMPLVLANLFHKSEMLIGFLIAPGAILSAVL
TPFVGRWLDRYGNVRFLFIGTAVLTVVMALFMTALGSSPFVIMCGYLLFSPAFSATLASL
NNQTSSILPRHLIGSGMGMMQLIQFFGGSLSVAICGVLLHKMSSITLEHAYNHVYQLLFI
CPIIAIAMLGWYYSSYRKNVQAQKLV
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
ttgaatgacagaatcgtaatgcccgtgtggatgctgggcttgtttgtcgtggtcatgaat
acgaccatgtttaacgtctcggtaccaagtattattaatgatctcggaatcacttcggat
cttggctcatggatcgtatccagctattcgattggatatgccctatcaacggtgatttac
agccgcttatcggacatcgctccaatacgcaggctggtagcggtagggctgctaatatta
ggactttcttcggtgcttggaatctttgctcataattttgctcttctgctaacggcgcgg
attcttcaatcggcaggagcaggtacgatggccggacttggacttgttctggcaagccgt
tatatcccggttgaacgaagaggccgggcgatctcgatgattgcggccggcagcgcaatg
gcgtttggtcttgggccgattgtaggcggcgtcatcagcgaatattttggatggaacggc
ttgtttgtggtcacttgcctggtgctggttattttaccggtcttgctgaagctgctgccg
aaggaaaatccgcagccggccagctttgactattggggggccgcctggaccgttattaat
gcgacttctttactgattgcggtaacgcagcagtccgtcatctggcttctagccagcgtg
attacgattgtgatacatgtgctccatatccggaaggcgcagggcaacggaactttcgtg
aatccggaagtattccgccagcccggctatatccggctgcttgtggtaggcttctgcctg
cttatcattaacctgggcaacctgttcctgatgccgcttgtcctggcgaatctattccat
aaatcggagatgctgattggcttcctgattgctccgggtgcgattctatcggcggtgctc
acgccgtttgtcggacgctggctggaccggtacggcaatgtccggttcctgtttatcggg
acagctgtcttaacggttgtaatggcattgtttatgacggctcttggcagctcgcctttt
gttatcatgtgcgggtatttgctgttctcgccggcattctcggcaacgctggcttcgctt
aacaaccagacctccagcattctgccgaggcatttgattggctccggcatggggatgatg
cagcttattcagttttttggaggttccttgtcggtagcgatttgcggagttttgctccat
aagatgagcagtatcacgctggagcatgcttataaccatgtctatcaactgctgttcatt
tgcccaatcatagcgattgcaatgctaggctggtattactcgtcttatcggaaaaatgtt
caagcacaaaagcttgtttaa
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