Paenibacillus sp. JDR-2: Pjdr2_3290
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Entry
Pjdr2_3290 CDS
T00977
Name
(GenBank) major facilitator superfamily MFS_1
KO
K08168
MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
Organism
pjd
Paenibacillus sp. JDR-2
Module
pjd_M00704
Tetracycline resistance, efflux pump Tet38
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pjd02000
]
Pjdr2_3290
01504 Antimicrobial resistance genes [BR:
pjd01504
]
Pjdr2_3290
Transporters [BR:
pjd02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-2 (14 spanner) (DHA2) family [TC:
2.A.1.3
]
Pjdr2_3290
Antimicrobial resistance genes [BR:
pjd01504
]
Gene variants
Tetracycline resistance genes
Transporters
Pjdr2_3290
Gene sets
Vancomycin resistance modules
Tetracycline resistance, efflux pump Tet38 [MD:
M00704
]
Pjdr2_3290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
Motif
Other DBs
NCBI-ProteinID:
ACT01926
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All DBs
Position
complement(3766460..3767863)
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AA seq
467 aa
AA seq
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MPAEQPDVRPPAIGNVLIKLLAFTLVLSSMSATMFNIVLPEIRADFELTVAQVSWVSTAY
LLIYAVGSVIYGKLLDRYQAKNLITFGLLVFASGSLLGLLAGSFPFVLMARILQAVGASV
IPALAMLIPVRYFPPERRGHALGISVTGLALGNAIGPIVSSLLVSVVHWRWLFAIPLLIL
ITLPFYRKHLSSDIKEGGTIDWLGGGLLTGTVALLLLAITQGNLWLGAGSALMLIGFLWR
IRAAADPFISRALMRDRIYLMGLMIAAIVMSISYALPFLTPQLLSDINRLEPGIIGFVMV
PGACLSAYLGRKVGKLADSKGNSFVYHTASLLLFSCFLLLSLFVGSPAVLIGLIFTLGNV
GQMFMQIVLSNTISRSIPRDQIGVGMGLLTLCNFLSGAVSTGIYGKVMDHGARSSWIPWH
SNAASYVFSNLYLILALIHIVLLLLYRSVYVSRKKTNTTGQMLSNQR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagaacaacctgatgtcagaccaccggctataggaaacgtgcttataaagctt
cttgcgttcaccctggttttatcttccatgagcgcaacgatgtttaatattgttcttccc
gagatccgggccgactttgaactgaccgttgctcaagtcagttgggtgtcgactgcctat
ttacttatctacgcagttggttccgttatttacggcaagctgcttgatcgttatcaggcc
aaaaatctgattacctttggactcctcgtatttgcttcaggttctttgctaggtctgctt
gcggggtcgtttccttttgtactaatggcaagaattctgcaagcggttggcgcatccgtt
ataccggcactagccatgttaataccagtccgctattttccaccggaaagaagagggcat
gccctgggaatttcagttaccggattagcgcttggcaatgcgattggacctattgtctca
tcactcttggtgtcagttgtccattggagatggctgtttgcgattccattgctgattctg
atcactttgccattctaccgtaagcatttgagctcggatataaaagaaggcggaactatt
gattggcttggaggaggacttcttacggggacggtagctctattactgcttgccattacg
caagggaacttgtggctgggcgccggcagtgcattgatgcttatcgggttcttgtggcgt
atacgtgcagctgctgatccctttatctccagggcgcttatgagggaccgcatctattta
atgggattaatgattgctgcgattgtgatgagcatcagttatgcattgccgtttcttacg
cctcaattgttgtcggatatcaatcggttggagccaggcataattggtttcgtcatggtt
cccggagcatgcttgtccgcttatttaggtcgaaaagtagggaagttagcggattccaaa
ggcaattccttcgtgtatcacacggcgtcgttattattattcagctgttttctactgtta
tcgctatttgtaggaagtccggccgttctgattggcttgattttcactcttggcaatgtt
ggtcagatgtttatgcaaatcgtactttccaacacaatctcgcgcagcattccccgggat
cagattggggttggaatggggctgctaacgttgtgtaatttcctttccggtgcggtctct
acggggatttacggcaaagtgatggatcacggcgctcggtcgagttggatcccgtggcat
tcaaacgcagcttcctatgtattcagcaatctataccttattctggctcttatccatatt
gttttgcttcttctgtatcgtagtgtatatgtcagcaggaaaaagacgaatacaactggg
caaatgctgagtaatcagcgataa
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