KEGG   Paenibacillus sp. JDR-2: Pjdr2_5893
Entry
Pjdr2_5893        CDS       T00977                                 
Name
(GenBank) peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
  KO
K07260  zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
Organism
pjd  Paenibacillus sp. JDR-2
Pathway
pjd00550  Peptidoglycan biosynthesis
pjd01100  Metabolic pathways
pjd01502  Vancomycin resistance
pjd02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pjd00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Pjdr2_5893
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Pjdr2_5893
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    Pjdr2_5893
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pjd01002]
    Pjdr2_5893
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pjd01011]
    Pjdr2_5893
  09183 Protein families: signaling and cellular processes
   01504 Antimicrobial resistance genes [BR:pjd01504]
    Pjdr2_5893
Enzymes [BR:pjd01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.17  Metallocarboxypeptidases
    3.4.17.14  zinc D-Ala-D-Ala carboxypeptidase
     Pjdr2_5893
Peptidases and inhibitors [BR:pjd01002]
 Metallo peptidases
  Family M15: zinc D-Ala-D-Ala carboxypeptidase family
   Pjdr2_5893
Peptidoglycan biosynthesis and degradation proteins [BR:pjd01011]
 Peptidoglycan biosynthesis and degradation
  Carboxypeptidase
   Pjdr2_5893
Antimicrobial resistance genes [BR:pjd01504]
 Gene sets
  Vancomycin resistance modules
   Vancomycin resistance, D-Ala-D-Lac type [MD:M00651]
    Pjdr2_5893
SSDB
Motif
Pfam: VanY DUF1244 DUF6030 SARAF Chordopox_A13L DUF2615
Other DBs
NCBI-ProteinID: ACT04497
LinkDB
Position
complement(6755241..6756173)
AA seq 310 aa
MRRNVQRRKRRGLAFLAVCVVAIAVILFIRYENLTAQAPEETAANSQNSEQPSPTASDEP
AVSDEPTDAPTDAPSDKPSDTPSNTPSEKPSDKPTDTPADKPAIATAGEEDGYAVVAQPA
SVAVLVDKQYKLPDNYEPKDLVYPDVRFTFSEKIDKRKMRKEAAGALEDLFAGAEKDGIY
LAGVSAYRSQATQKTLFNNYVKKDGMEKALTYSAFPGTSEHQTGLAIDVSGSDGKCAATD
CFGGTPEAEWLADHASEYGFIIRYPEGKDAITGYKYEPWHLRYVGKELAKEINDKGLTLE
EYYNAVPVTK
NT seq 933 nt   +upstreamnt  +downstreamnt
atgagaagaaacgtacaaagacgaaaaagacgcggattagcttttctggcggtatgcgtg
gttgctatagcagtcattctgtttatccgctacgaaaatttaacggcccaggctccggaa
gagacagcggctaatagccagaactcagaacaaccttctcctacggcatcggatgagcct
gcagtttcggacgagcctacggatgcgccaacggatgcgccgtctgacaaaccgtcggac
acaccttcaaatacgccgtccgagaaaccgtcggacaagccaactgatacaccggctgac
aagcctgcgatagctactgcaggggaagaggatggctacgcggttgtcgctcagcctgca
agcgtagccgtgctggtggacaagcaatacaagctgcctgacaattacgagcctaaggat
ctggtttatccggatgttcgctttacgttcagcgagaaaatcgacaaacgcaaaatgcgc
aaggaagcggctggcgctctggaagatctgtttgccggtgcggagaaagacggcatttac
ctggccggggtctcggcttaccgttcgcaagcaacgcagaagacgcttttcaataattac
gtgaaaaaagacggcatggagaaagcattaacgtacagcgcattcccgggtacgagcgag
catcagaccggtcttgcgattgacgtatcgggcagcgacggcaaatgtgccgcgacggat
tgcttcggcggtactcctgaagcggaatggctggcggatcatgcatcggaatatggcttc
attatccgttatccggaaggcaaggacgccattacgggctacaagtacgagccttggcat
ctccgctatgtaggcaaggagctggctaaggagattaatgataaggggctgaccctggag
gagtattataacgcggttccggtaacaaaataa

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