Parabacteroides johnsonii: LK449_08315
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Entry
LK449_08315 CDS
T07907
Name
(GenBank) glycyl radical protein
KO
K23121
trans-4-hydroxy-L-proline dehydratase [EC:
4.2.1.172
]
Organism
pjo
Parabacteroides johnsonii
Pathway
pjo00330
Arginine and proline metabolism
pjo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
LK449_08315
Enzymes [BR:
pjo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.172 trans-4-hydroxy-L-proline dehydratase
LK449_08315
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PFL-like
Gly_radical
Motif
Other DBs
NCBI-ProteinID:
UEA92183
LinkDB
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Position
complement(2004589..2007027)
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AA seq
812 aa
AA seq
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MTTITAQRAPHSASNFAPAVEANAYGMNDRIKRLRQETFEAEPSLSIERALIETRFYKEN
YGKYPIPILRAMNFYEICKQKTIYIGKDELIVGERGPKPKCVPTFPELTCHSVEDLHVLN
TRELQRYTISQEDIDTYEREVIPYWKGRTQRERIFSHVPQEWKDAYEVGMFTEFMEQRAP
GHTALDGKVYKYGLLDLKERIRKELDGLDFMNDPEATDKQEELTAMSISCDAAILFAERH
ADLADEMSLTEKDPKRAAELRRIAEVCRQVPAHAPRNYWEAIQMYWFVHLGTITELNGWD
AMNPGHFDQHLAPFYEKGIADGTLTRDEAKELMSCFFIKVNNHTAPPKVGITAKESGTYN
DFTNLNIGGVKADGSDGVSEVSYIMLETIEELHILQPGSAIHISARTPERFLRAGCKVIR
QGHGYPSVFNPDVYIQELMRQGKSLQDAREGGCSGCIEVGAFGKEAYVLTGYLNVPKILE
VTLHNGVDPVSGRKVGLETGDPRGFGSYDELYAAFMKQVRYFVDMKVRVSNYIDRMFAKY
APATFLSLFIDDCIAKGRDYYNCGPRYNTTYIQCTGLGTITDSLATLKKHIFEDKRWSMD
ELLKAMADNFEGAEAMRQTILNRTPFFGNDDEYADSIAVKVFDDLYDTIEGKPNTKGECF
HLNMLSTTCHVYFGKVMGATPNGRLAGRAISDGTSPSHGADTHGPSAVIKSLGKLDQVKS
GGTLLNQRFLPSLLKREEDISKLSSLIRSYFALGGHHIQFNIVDTETLYAAQKCPEDYRD
LLVRVAGYSDYFNDMNADLQADVIMRTEQETF
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgactacaatcacagctcagcgtgcaccgcacagtgcatctaatttcgctcccgcagta
gaggcaaatgcctatggaatgaatgaccggatcaaacgtcttcgacaagagacgttcgaa
gccgagccctccctgtctattgaacgcgctttgatagaaacccgtttctacaaggaaaac
tacggaaaatatccgattccgattcttcgggccatgaatttttatgagatctgcaagcag
aagacgatctatatcggcaaggacgaactgatcgtgggcgaacgcggaccgaaaccgaaa
tgtgtgccgactttcccggaactgacctgccatagtgtggaggatctgcatgtcttgaac
acacgtgaattgcagcgttatacgatcagccaggaagacatcgacacgtatgaacgcgaa
gtgatcccttactggaaagggcgtacccagcgagaacgtatcttcagccatgtgcctcag
gagtggaaggatgcctatgaggtggggatgtttaccgaatttatggaacaacgcgctccg
ggacataccgctttggacggaaaggtgtataagtacggattgctggatttgaaagaacgt
atccggaaagaactggacgggctcgatttcatgaacgatcccgaagcgaccgacaagcag
gaggaactgactgccatgtccatctcgtgcgacgccgccatcttgtttgccgaacggcat
gcggacctcgccgatgaaatgtcgctgacggagaaagacccgaaacgggcggccgagtta
cgccgtattgccgaagtttgccgccaggttccggcccatgctccccgcaactattgggag
gcgatccagatgtattggttcgtccacttagggacgatcaccgaactgaacggttgggac
gcgatgaatcccggtcatttcgaccagcatctggctcctttctacgaaaaggggattgcc
gacggtacgttgacacgcgacgaggcaaaagaattgatgtcctgtttcttcatcaaggtg
aacaaccacacggctcctcccaaagtcggcatcacggctaaggaaagcggtacgtataat
gattttacgaacctgaatatcggcggtgtgaaagccgatggtagcgacggggtgagcgag
gtttcctatatcatgctcgaaacgatcgaagaactgcatatcctgcaacccggcagtgcg
atccatatcagtgcccgcacaccggaacgttttctgcgtgccggttgcaaggtgatccgc
cagggacatggctatccgtccgtgttcaatccggatgtgtatatccaggagttgatgcgc
cagggaaaatcgttgcaggatgcacgcgaaggtggttgcagcggttgtatcgaggtcggg
gcgttcggcaaggaggcgtatgtgctgaccggttacctgaatgtgccgaagattttggaa
gtgacgctccacaacggtgtcgatccggtttccgggcgtaaggtcggattggagacgggc
gatccgcgcggtttcggcagctatgacgaactatatgccgcctttatgaagcaggtccgc
tactttgtggatatgaaggtgcgtgtcagcaactatatcgaccgtatgtttgccaagtat
gcaccggctaccttcctgtctctcttcatcgacgattgcatagcgaaaggacgggactat
tacaactgcggcccgcgctataatacgacctatatccagtgtacgggactcggtacgatt
accgacagcctggcgacgctgaaaaaacatatattcgaagataaacgctggtcgatggac
gaactgctgaaagcgatggccgataatttcgaaggggccgaggcgatgagacagacgatt
ctgaaccgcacgccattcttcggaaacgatgacgaatatgccgacagtattgctgtgaag
gtgtttgacgatctctatgatacgatcgaaggaaagccgaatacgaaaggcgaatgtttc
catctgaatatgctgtctaccacctgtcacgtatatttcggcaaggtgatgggggcgact
cctaacggacgcttggccgggcgtgccatctcggacggcacatctccgtctcatggcgcc
gatacgcacgggccgtctgccgtcatcaagtcgctcggcaagcttgaccaggtgaagagt
ggaggaacgttgctgaaccagcgtttcctgccgagcctgctgaagcgtgaggaggatatc
tccaagttgtcttcgttgatccgcagctatttcgctttgggcggacatcacatccagttc
aatatcgtcgatacggagacgctttatgctgcccagaaatgtccggaagattatcgcgac
cttctggtccgcgtagccggttacagcgattatttcaatgacatgaatgccgatctgcag
gcggatgtgatcatgcggacggaacaggaaacgttttag
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