Parabacteroides johnsonii: LK449_16725
Help
Entry
LK449_16725 CDS
T07907
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pjo
Parabacteroides johnsonii
Pathway
pjo01501
beta-Lactam resistance
pjo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LK449_16725
01503 Cationic antimicrobial peptide (CAMP) resistance
LK449_16725
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pjo02000
]
LK449_16725
01504 Antimicrobial resistance genes [BR:
pjo01504
]
LK449_16725
Transporters [BR:
pjo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LK449_16725
Antimicrobial resistance genes [BR:
pjo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LK449_16725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
MFS_1
HMA
Motif
Other DBs
NCBI-ProteinID:
UEA90171
LinkDB
All DBs
Position
4064970..4068140
Genome browser
AA seq
1056 aa
AA seq
DB search
MKSIIKFAVSNPVTICMLVLAILLLGKISYDQLAVDLLPDLNNPRLFIELKAGERPPEEI
EKQFIKNMESMAIRQSDVTQVSSVIRAGSARITVEYTWKKDMDEAFLDLQKAMNPFAQHK
DITELKITQHDPNQSPVVLIGLSHRSITDMAELRKVAESYIRNELIRLEGVADVTLSGDE
ISTLVIRTDPYKLDAFKLTINDLSSKIEANNQSISGGRVSELGLQYLVKSSSLFTTESDF
ENLIVGYRPVTVETDGTAVSGTSGASVSSSTDKAPIFLREVATVSFENARPENIVRINGE
RSIGLSVYKEMRFNTVKVVDGVIRQLAVIEQALPGYRFQVITNQGTFIKNAIGEVKSSAV
LGIILAVVILFVFLRRLGTTLIVSLAIPISIIATFNLMFFNHLTLNIMTLGGLALGAGML
VDNAIVVIESIFRNQEKGMTIREAAITGTSEVAGAVIASTLTTIVVFLPIVYLHGASGEL
FKDQAWTVTFSLVSSLFVAILVIPMLYDRITGRPNPFPRLGRDRKETDCDSAGSSASPCQ
TRGQGIRITGYSPLLRILLRHRWVVIGCALMLLLLAVALVPFIGTEFMPRAESKAFSAVI
KLPEGTPLERTVSAVENLEELMHVISRDSLCTIYSHVGSGSGSENDIFEGENTAVMKVIL
SPACPVPPEEVMAQFVRTTENTEGLEVILKQEENSLSSLLGSEGAPIVVEVKGEELDEIS
AISGEVMERITGIPGIYNIRSSVEDGAPEVTISVDRTVAGIHNVSVSTVIEQLKQQLGGL
ESGKMEYRGEMRDILIKVPDITLHDLGGIVIRSGEKEFRLQEIATITHSQAPKEIFRRGQ
NRISKVTANLDAGYSLDRVADNIRFAMKDIDLPANYSITVTGEEEKRQESMDSLMFALAL
SVILVYMVLASQFESLLHPFTILLTIPLAVVGAILLFFLTGTTINMMGVIGIVMLVGIAV
NNSIILVDRINQLKQSGMELTDAIVESGQQRIRPILMTTLTTILALLPMTFGFGEGASLR
SPMAIAVIGGLVTSTVMSLMVIPCVYYVFEKMKRGR
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtattatcaaatttgcggtaagcaatccggttacgatctgtatgctggtactg
gcgatcctgctgctgggtaagatttcctatgaccagttggcggtcgacctgttgcccgac
ctcaataatccccgtctctttatcgagctgaaggcaggcgaacgtccgccggaggagatc
gagaagcagtttattaagaatatggagtcgatggcgatccggcagagcgacgtgacacag
gtttcatccgtgatccgtgctggttccgcccgtattacggtcgagtacacttggaagaaa
gatatggacgaggcttttctcgacttgcagaaagccatgaacccttttgcccagcataag
gatatcaccgaacttaagatcacgcagcacgatccgaaccagtcccctgtcgtcctaatc
ggactttcacaccgtagcattaccgatatggcggagctccggaaggtggcggagagctat
atccgtaacgaattgatccgtctggaaggagttgcagatgttacgctgtcgggtgacgag
atcagtaccctggtgatccgcacggatccttataagttagatgcctttaagttgacgata
aatgatctgtcttccaaaatagaggcgaataaccaaagcatatccggcggtcgtgtcagc
gagttgggtctgcaatacctggttaagagttcgagtctgtttacgacggagagtgatttt
gagaatctgattgtcggttataggccggttacggtcgagacagatgggacagcagtttcg
ggaacttccggtgcgtctgtttcatcgtctacggacaaagctccgatcttcttgcgcgaa
gtcgctaccgtcagcttcgagaatgctcgtccggaaaatattgtccgcatcaatggtgag
cgcagtatcgggttatccgtttataaggagatgcgtttcaatacagtgaaagtagtcgat
ggtgtgatccgccagttggcggttatcgagcaggcgttgccgggatatcgtttccaggtg
atcacgaaccagggaacctttatcaagaatgcgatcggagaggtgaagagcagtgccgtc
ttagggattatacttgcggtggtgatcctgttcgtcttccttcgccgcctagggacgacg
ttgattgtcagcctggctatcccgatttccattatcgccactttcaacctgatgttcttc
aatcatcttacgctgaatatcatgacacttggcggattggcccttggagccggtatgctg
gtggataatgcgatcgtagtgatcgaaagtattttccgtaaccaagaaaaagggatgacg
atccgtgaagctgccataacgggtacttccgaagtagccggtgcggtcattgcctcgaca
ctgacgacgatcgttgtctttctgccgattgtctatctgcatggtgcctccggagaactg
tttaaggaccaggcttggacggtgacgttctcgctggtatcgtcgttattcgtggctata
ttggtgatcccgatgttatacgaccggattaccggacgccctaaccccttcccgcgctta
gggcgcgatcgtaaagaaaccgactgtgatagtgccggttcatctgcatccccgtgtcaa
acgcggggacagggcattcggattactggttacagtcctctgttgcgtatcctgcttcgt
caccgttgggtggtgatcggctgtgctctgatgttgctgttgctggcggtagccttggtg
ccttttatcggtacagagtttatgccgagagccgagagcaaggctttctctgccgttatc
aagttgccggagggaactccgttggagcgtactgtttcggctgtcgaaaatttggaggag
ctgatgcacgttatctcgcgggattccttgtgtacgatctacagtcatgtcggatcaggt
agcggttcggagaatgatatattcgaaggagagaatacggctgtcatgaaagtgatcctt
tctcccgcttgtccggttccacccgaagaagtgatggcacagttcgtccggacgactgaa
aacaccgaagggttagaggtcatcctgaaacaagaagagaactccctcagttcactttta
ggaagcgaaggagctcctattgtggtcgaggtgaagggagaggagttggacgagatcagt
gctatctccggtgaagtaatggaacggataaccggtattcccggaatctataacatccgg
tcgtctgtcgaagacggtgctccggaggtaacgatctctgtcgaccgtacggttgccggt
atccataatgtcagcgtctcgactgttatcgaacagttgaagcagcagctcggcggtctc
gaatccggcaagatggaataccggggagaaatgcgggatatcctgatcaaggttcccgat
atcaccttgcatgacctcggtggaattgtcatacgaagtggcgagaaagagttccgcttg
caggagatcgctacgatcacccattcgcaggctccgaaagagatttttcgtcgcgggcag
aaccgtatcagcaaggtgacggccaatctcgatgcaggctattcgctcgacagggtggcg
gacaatatacgctttgctatgaaagatatcgatctgcctgccaattattcgattaccgtc
accggcgaggaagaaaagcgtcaggagtctatggacagcctgatgtttgccctggctctt
tcggtgattctggtttatatggtgctcgcttcacagttcgagtcgctgttgcatcccttt
acaattttgttgacgattccgttggcagtggtgggagcgatcttgttgttcttcctgaca
gggacgacgatcaacatgatgggagtgatcggcatcgtgatgctggtcggtatcgcggtg
aacaattcgattatcttggttgaccgtatcaaccagttgaaacagtccggaatggaactg
acggatgccattgtggaatccggccagcaacgtatccgcccgatcctgatgacaacactc
acaacgattcttgccctcttgccgatgacgttcggtttcggtgaaggtgcttcacttcgt
tcacctatggcaatcgcggtgatcggtgggttggtgacttcgactgtcatgagtctgatg
gtcatcccgtgtgtatattatgtatttgaaaaaatgaaaaggggaagatga
DBGET
integrated database retrieval system
