Paenibacillus kribbensis: B4V02_08710
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Entry
B4V02_08710 CDS
T05249
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pkb
Paenibacillus kribbensis
Pathway
pkb00300
Lysine biosynthesis
pkb00550
Peptidoglycan biosynthesis
pkb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pkb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
B4V02_08710
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
B4V02_08710
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pkb01011
]
B4V02_08710
Enzymes [BR:
pkb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
B4V02_08710
Peptidoglycan biosynthesis and degradation proteins [BR:
pkb01011
]
Precursor biosynthesis
Amino acid ligase
B4V02_08710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
RraA-like
Motif
Other DBs
NCBI-ProteinID:
ASR46754
UniProt:
A0A222WLC8
LinkDB
All DBs
Position
1957788..1959275
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AA seq
495 aa
AA seq
DB search
MELQQLASLLAVSRIVGDGTVDCRGIGADSRRVEQGDLFLCLPGFTVDGHDYAVQAIASG
AAALVVERELDVSVPQLVVKDARYAMAVLSDYMFDSPSRRLRMIGITGTNGKTTITYLIE
KIMNDAGVNTGLIGTIQMRYGGQSYPMSGTTPEAVELQRYLGNMAEQGVQCCVMEVSSHA
LEQGRVKGTDFRTAIFTNLTQDHLDYHKTMEEYRAAKGLLFSRLGNAFSRDWSDSKYAVL
NADDPASSYFQAQTAAQVITYGVEKESDVQASRIAISAKGTSFHVSTFKGDTDIELRMVG
KFNVYNALAAITAALLEGISLADIKHSLESIAGVDGRVEPVDAGQPFAVIVDYAHTPDGL
ENVLRTVKEFAVGKIWCVFGCGGDRDRTKRPLMGKIAARYSDHSFITSDNPRTEDPEVIL
KDIEQGLIDEGVAAERYELIVDRRAAIHKAIEMASPDDVVLIAGKGHETYQLIGKTVHEF
DDRIVAKEAIRGLSK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcaacaattggcttcactgctggccgtctcccgcatcgtgggggatggtaca
gtggattgccgaggaatcggggcggattcacgtcgggtagagcagggagacttgtttctg
tgcttgcctggttttacagtggacggacatgactatgccgtgcaggcaattgcgtccggt
gcggcagccttagttgtagagcgggagctggatgtgtctgttccacagcttgtggttaag
gacgctcgttatgccatggcggttttgtcggattatatgtttgattcaccgagccgtcga
ttgcgcatgatcggcatcaccggaaccaacggcaaaaccacaattacttatctaattgaa
aaaatcatgaatgatgccggagtaaacaccggactgatcggtacgattcaaatgcgttat
ggtggtcagtcttaccctatgtcaggcactacgcccgaagcggtagagctgcaacgttat
ctcggcaatatggcagagcaaggtgttcaatgctgtgtcatggaggtatcctcacatgca
ctggagcagggacgcgtcaaaggaactgattttcgtaccgctatatttacaaacctgaca
caggatcacctggattatcataagacaatggaggagtaccgtgctgctaaaggacttttg
ttttccagattgggaaatgccttctcgcgggattggtcggacagtaaatatgctgttctg
aatgcggatgatccggcctcttcctacttccaggctcaaactgcggcccaagtcattaca
tatggcgtggaaaaggaatccgatgtgcaggcatcccgtatcgcgattagcgcgaagggg
acctccttccatgtgtcgactttcaaaggggataccgatattgagcttcgaatggtaggc
aagttcaatgtgtacaacgcattagcagccatcacggctgctttactggaagggatctcg
ctggccgatattaagcacagtctggagtctatagcaggcgtagacgggcgggtagagcct
gtagatgcgggtcagccgtttgctgtgattgtagattatgctcataccccggacggattg
gaaaacgttcttcgcacggttaaggaatttgcggtcggtaaaatatggtgtgtatttgga
tgcggtggagatcgggatcgtaccaaacgtcctttgatgggaaagattgccgcgcgatac
agcgatcattcgtttattacttccgacaacccccgaacagaggacccggaagttattttg
aaagatatcgagcaggggctgattgacgaaggggtagccgcagaacgatacgagctgatc
gtagatcgcagagctgctattcataaagctattgaaatggcaagccctgacgatgtagta
ttgattgcgggaaaaggtcatgagacctaccagctgatcggaaaaacggtgcatgaattc
gatgaccgcatcgtagccaaagaagcgataaggggtttatccaagtga
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