Pseudomonas knackmussii: PKB_1448
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Entry
PKB_1448 CDS
T03081
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PKB_1448 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkc03400
]
PKB_1448 (nth)
Enzymes [BR:
pkc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PKB_1448 (nth)
DNA repair and recombination proteins [BR:
pkc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PKB_1448 (nth)
Prokaryotic type
PKB_1448 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
HHH_8
DUF4817
Motif
Other DBs
NCBI-ProteinID:
CDF82810
UniProt:
A0A024HCL0
LinkDB
All DBs
Position
complement(1493072..1493710)
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AA seq
212 aa
AA seq
DB search
MNAAKRAEIFRRLREDNPNPETELAYSTPFELLIAVILSAQATDVGVNKATAKLYPVANT
PEAIYALGVEGLSEYIKTIGLYNSKAKNVIEACRILVEKHGSQVPDNREDLEALPGVGRK
TANVVLNTAFRQPAMAVDTHIFRVANRTNIAPGKNVLEVERQLLKFVPKEYLLDAHHWLI
LHGRYVCKARKPQCGSCRIEDLCEYKHKTSDD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgccaagcgcgcggagattttccgccgtctgcgtgaagacaaccccaacccc
gagaccgagctggcctacagcacgccgttcgagctgctgatcgcggtgatcctttccgcc
caggccaccgacgtcggggtgaacaaggccacggcgaagctctacccggtggccaacacg
ccggaggcgatctacgcccttggtgtcgaagggttgtcggagtacatcaagaccatcggc
ctgtacaacagcaaggcgaagaacgtcatcgaggcctgccgcatcctagtcgagaagcac
ggcagccaggtgccggacaatcgcgaggacctcgaggcgctgcccggcgtaggccgcaag
actgccaacgtagtactcaacacggctttccggcagccggccatggcagtggatacgcac
atcttccgcgtcgccaaccgcaccaacatcgcgccggggaagaacgtcctggaagtcgag
cgccagctgctcaagttcgtgcccaaggagtacctgctcgacgcgcaccactggctgatc
ctgcatggccgctacgtctgcaaggcccgcaagccgcagtgcggcagctgccggatcgag
gatctatgcgagtacaagcacaagacttccgacgattga
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