Pseudomonas knackmussii: PKB_5686
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Entry
PKB_5686 CDS
T03081
Symbol
ubiC
Name
(GenBank) putative chorismate--pyruvate lyase
KO
K03181
chorismate lyase [EC:
4.1.3.40
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc00130
Ubiquinone and other terpenoid-quinone biosynthesis
pkc01100
Metabolic pathways
pkc01110
Biosynthesis of secondary metabolites
pkc01240
Biosynthesis of cofactors
Module
pkc_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
PKB_5686 (ubiC)
Enzymes [BR:
pkc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.40 chorismate lyase
PKB_5686 (ubiC)
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Gene cluster
GFIT
Motif
Pfam:
Chor_lyase
Rv2949c-like
Motif
Other DBs
NCBI-ProteinID:
CDF86996
UniProt:
A0A024HQ34
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All DBs
Position
6009531..6010082
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AA seq
183 aa
AA seq
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MSDFSSPLPRWLAEDQLPANVDPAVHDWLFDQGSLTRRLTALAEGAFSVEPLCEEWQVLR
DDECAALGVPNGSQGWVREVYLHGHGQPWVFARSVAARAALEASGFDLALLGTRSLGELL
FSDSAFRRDVIEICLYPAPFLPLEVRRTLLWGRRSCFRRGALGVLVAEVFLPRLWRAAGV
DAL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgatttttcctcccccctgccccgctggctcgctgaagaccaactgcccgccaac
gtcgaccccgccgtacacgactggctgttcgaccagggctcgctgactcgccgcctcacc
gccctcgccgaaggcgccttcagcgtcgagccgctgtgcgaggagtggcaagtgctgcgc
gacgacgagtgcgccgcgctgggcgtgcccaacggcagccagggctgggtgcgcgaggtc
tacctgcacggccacggccagccctgggtgtttgcccgcagcgtcgccgcgcgcgccgca
ctggaagcatcgggcttcgacctggcgctgcttggcacacgctcgctgggcgagctgctg
ttcagcgacagcgcgttccgccgcgatgtgatcgaaatctgcctgtaccccgcgcccttc
ctcccgctggaagtgcgccgcacgctgctttggggccgccgttcgtgcttccgccgcggc
gcgctgggcgtgctggtcgccgaagtgttcctgccgcgcctgtggcgcgccgccggggtc
gacgccttataa
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