Paracoccus kondratievae: F8A10_02290
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Entry
F8A10_02290 CDS
T06245
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pkd
Paracoccus kondratievae
Pathway
pkd00300
Lysine biosynthesis
pkd00550
Peptidoglycan biosynthesis
pkd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pkd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
F8A10_02290
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
F8A10_02290
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pkd01011
]
F8A10_02290
Enzymes [BR:
pkd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
F8A10_02290
Peptidoglycan biosynthesis and degradation proteins [BR:
pkd01011
]
Precursor biosynthesis
Amino acid ligase
F8A10_02290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF2249
LpxD
MalF_P2
Motif
Other DBs
NCBI-ProteinID:
QFQ86360
LinkDB
All DBs
Position
1:445764..447233
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AA seq
489 aa
AA seq
DB search
MRLSLLGLRGDKGRDPEITGLAVDSRQVRPGCLFAALPGSAVHGAEFIQYALRQGAGAVL
TDRKGAEVAAAELAGADAALVVAEDPRAALAGAAALWFAAQPETMVAVTGTSGKTSVATF
TRQIWQALGHKAISLGTMGVQGDYQAKLAHTTPEPITLHRVLAEAAAEGVTHAAMEASSH
GLDQHRLDGVRLKAGAFTNFSQDHLDYHKDFDEYFAAKALLFDRLLDEGAGAVINIDDAR
GRQMEQIARDRGLKLTTVGRAERADLRILNQRYDATGQDLRFSLYGQAHLVRLALIGGFQ
AENVLAAAGLVIAAGDEPARVLDTLSSLTTVRGRMELAAVRENGAAVFVDYSHKPGALAS
ALQSLRPHVMGRIVVVFGAGGDRDRLKRPLMGEAARQFADVVYVTDDNPRSEDPAAIRAE
VMAGAGPEAIEIGDRAEAILRAVDTLQPGDALLIAGKGHETGQIIGSDVYPFDDAEQASV
AVAALDGKI
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgtcccttctggggcttagaggggacaaggggcgcgaccccgagattacgggc
ctggctgtcgattcgcggcaagtcaggccgggctgcctgttcgcggcgctgccgggttcg
gcggtgcatggggccgagttcatccaatacgcgttgcgccagggcgcaggggcggtcctg
accgaccgcaagggcgccgaggttgctgctgccgaattggcaggcgcagatgcggcgctg
gtcgtggccgaggatccgcgcgccgcgcttgccggtgccgccgcgctgtggtttgccgcc
caacccgagacgatggttgctgtcaccggcacctcgggcaagacctcggttgcgaccttt
acccgccagatctggcaggcgcttggccataaggcgatcagcctgggcaccatgggcgtg
cagggcgactatcaggccaagctggcccataccacgcccgagccgatcaccctgcaccgc
gttctggccgaggcggccgccgagggcgtcacccatgcggcgatggaggccagctctcat
ggtctggaccagcatcggctggacggggtgcggctgaaggccggggccttcacgaatttc
agtcaggaccacctcgactaccacaaggactttgatgaatatttcgccgccaaggcgctg
ctctttgaccggctgctggacgaaggtgcgggcgcggtcatcaatatcgacgatgcgcgc
ggccggcagatggaacagatcgcccgcgaccggggcctgaagctgacgaccgttggccgt
gccgaacgtgctgacctgcgcatcctgaaccagcgctatgatgcaaccgggcaggatctg
cgtttcagcctgtatggtcaggcgcatctggtgcgtctggcgctgatcggcggttttcag
gccgagaacgtcctggctgcagcgggccttgtcatcgctgccggggatgagccggcgcgc
gtgcttgacaccttgtcgagcctcaccacggtgcgcggccggatggagcttgcggcggtg
cgcgagaatggcgcggcggtctttgtcgattacagccacaagcccggcgctctggcctcg
gccctgcaatcgctgcgaccgcatgtcatgggccgtatcgtcgtggtctttggcgccggt
ggtgaccgcgaccggctcaagcgcccgctgatgggcgaggcggcgcggcaattcgcggat
gtcgtttatgtcaccgacgacaacccccgatccgaggacccggccgcgatccgcgccgag
gtgatggccggggctggacccgaggcaatcgagatcggagaccgggccgaggcgatcctg
cgcgcggtcgatacgcttcagccgggtgatgcgctgctgatcgcgggcaaagggcatgag
accggccagatcatcggcagtgacgtttatccattcgacgatgccgaacaggcctcggtg
gccgtcgcggcgctggatggcaagatatga
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