Pseudomonas kribbensis: DLD99_09855 Help Entry DLD99_09855       CDS       T06348                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pke  Pseudomonas kribbensis Pathway pke03030   DNA replication pke03410   Base excision repair pke03420   Nucleotide excision repair pke03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pke00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     DLD99_09855    03410 Base excision repair     DLD99_09855    03420 Nucleotide excision repair     DLD99_09855    03430 Mismatch repair     DLD99_09855  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pke03032]     DLD99_09855    03400 DNA repair and recombination proteins [BR:pke03400]     DLD99_09855 Enzymes [BR:pke01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      DLD99_09855 DNA replication proteins [BR:pke03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      DLD99_09855 DNA repair and recombination proteins [BR:pke03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      DLD99_09855    NER (nucleotide excision repair)     GGR (global genome repair) factors      DLD99_09855    MMR (mismatch excision repair)     DNA ligase      DLD99_09855   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       DLD99_09855 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT Nlig-Ia DNA_ligase_ZBD PTCB-BRCT DUF4796_N Motif Other DBs NCBI-ProteinID:  AXI60766 UniProt:  A0A345RNA0 LinkDB All DBs Position 2117283..2119640 Genome browser AA seq 785 aa AA seqDB search MTAAKDRILELRAELDQHNYRYHVLDEPSIPDAEYDRLFHELKALEAANPELITSDSPTQ RVGSVALTAFTQVRHEVPMLSLGNAFEETDMREFDRRVTEGLDLPAGDLFGGGAAVEYSC EPKLDGLAVSLLYQDGVLVRGATRGDGTTGEDISVNVRTVRNIPLKLHGEGWPATLEVRG EVFMSKAGFERLNASQLEVGGKTFANPRNAAAGSLRQLDSKITANRPLEFCCYGIGQVSH DISDTHIGNLKQLQAWGMPISHELKLAKGIGECLDYYRDIGERRNSLAYEIDGVVFKVNN IADQRELGFRAREPRWAIAHKFPAMEELTELLDVEFQVGRTGAVTPVARLKPVKVAGVTV ANATLHNMDEVARLGLMIGDTVIIRRAGDVIPQVVQVVIERRPEDARPVQIPESCPVCGS HVERTQLVKRSKGKETISEGAVYRCVGRLACGAQLKQAIIHFVSRRAMDIEGLGDKSVEQ LVDEGLVSSPADLYALRFDDIVDLEGFAEVSSNKLLAAIEDSKKPGLARFIYALGIPDVG EETAKVLARSLGSLERVQQALPQVLTYLPDIGLEVAHEIHSFFEDAHNQQVITELLGHGL QIQDQGELGAEFAASTTLGGFLDKLHIPSVGPGGAQKLADKFETLEGVMNADWLDMRQAL PEKQANSVREFFELPEHRQLAESAEKQLRDFGMHWQSEKKVVEGLPLAGETWVLTGKVEL MSRDVAKEHLESLGAKVAGSVSAKTHCVVAGPGAGSKLTKANELGVKVMDEEAFIAFLKG HGISA NT seq 2358 nt NT seq  +upstreamnt  +downstreamnt atgactgccgccaaagaccgcattctagagctgcgcgctgaactcgatcagcacaactac cgttaccacgtactcgatgagccgagcattccggatgccgagtacgaccggttgttccac gagctcaaggcgctggaagcggccaacccggaactgatcaccagcgactcgccgacccag cgcgtcggcagcgtggcgctgaccgcattcacccaggtgcgtcacgaagtgccgatgctc agcctcggcaacgccttcgaagaaaccgacatgcgcgagttcgaccgccgggtgaccgaa ggtctggacctgccggccggtgatctgttcggcggtggtgcggcagtggaatacagctgc gagccgaaactcgatggcctggcggtcagcctgctgtatcaggacggcgtgctggtacgc ggcgccacgcgcggcgacggcactactggcgaagacatcagcgtcaacgtgcgcaccgtg cgcaacattccgctgaagctgcacggcgaaggctggccggcgaccctggaagtgcgcggc gaagtgttcatgtccaaggccggtttcgagcgcctcaacgcctcgcaactggaagtcggc ggcaagactttcgccaacccgcgcaacgcggctgccggcagcctgcgtcagctggattcg aagatcaccgccaaccgtccgctggagttctgctgctacggcatcggccaggtttctcac gatatttccgacacccacatcggcaatctcaagcaactgcaagcctggggcatgccgatc agccatgaactgaaactggccaaaggcatcggcgaatgcctggattactaccgcgatatc ggtgagcgccgtaactcgctggcctatgaaatcgacggcgtggtgttcaaggtcaacaac attgccgaccagcgcgaactgggcttccgcgcccgcgaaccgcgctgggccatcgcgcac aaattcccggccatggaagaactcaccgaactgcttgacgtggaattccaggtcggtcgc accggtgccgtcacgcccgtggcgcggttgaaaccggtcaaggtcgccggcgtcaccgtg gccaacgccacgctgcacaacatggacgaagtcgcacggctgggcctgatgatcggcgac acggtgatcattcgccgtgccggtgacgtgatcccgcaagtggtgcaagtggtcatcgag cgccgcccggaagatgcgcggccggtgcagattcccgagagctgcccggtctgcggctcc cacgtcgagcgcacgcaactggtcaagcgcagcaagggcaaggaaaccatcagcgaaggc gcggtgtaccgctgcgtcggtcgtctggcctgcggtgcgcaactcaagcaggcgatcatt cacttcgtttcccgtcgggcgatggacatcgaaggcctcggtgacaagagcgtcgagcaa ctggtcgacgaaggtctggtcagttcgccggccgatctttatgcgctgaggttcgacgat atcgtcgatctggaaggctttgccgaggtgtcgagcaacaagttgctggccgccatcgaa gacagcaagaagccgggtctggcgcgctttatctatgcgctgggtatcccggatgtcggc gaggagacggccaaggtgctggcgcgttcgctgggttcgctggagcgcgtccagcaagcc ttgccgcaagtgctgacgtacctgccggacatcggtctggaagtggcccacgagattcac agcttctttgaagatgcgcacaaccagcaggtgattaccgaattgttgggccatggtttg cagattcaggatcagggcgagctgggcgccgagtttgccgccagcaccacgttgggcggt ttcctcgacaagctgcacatcccttcggtggggccgggcggggcgcagaaactggcggac aagttcgaaacgctggaaggggtgatgaacgctgactggctggacatgcgccaggcattg ccggagaagcaggccaactcggtgcgcgagtttttcgaactgcccgagcatcggcaactg gcggaaagcgccgaaaagcagctgcgcgatttcggcatgcactggcagagcgaaaagaaa gtcgtcgaaggcctgccgctggccggggagacctgggtgctgaccggcaaggtcgagctg atgagccgcgatgtcgccaaggaacacctggaaagccttggcgccaaggtcgccggttcc gtgtcggccaagactcattgcgtggtcgcggggccaggcgccgggtcgaaactgaccaag gccaacgagttgggcgtgaaggtcatggatgaagaggcatttatcgcgttcctgaaaggg cacggtatttccgcctga

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