Ectopseudomonas khazarica: JLK41_04805
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Entry
JLK41_04805 CDS
T07269
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pkh
Ectopseudomonas khazarica
Pathway
pkh00300
Lysine biosynthesis
pkh00550
Peptidoglycan biosynthesis
pkh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pkh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JLK41_04805
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JLK41_04805
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pkh01011
]
JLK41_04805
Enzymes [BR:
pkh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
JLK41_04805
Peptidoglycan biosynthesis and degradation proteins [BR:
pkh01011
]
Precursor biosynthesis
Amino acid ligase
JLK41_04805
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
QTS87497
LinkDB
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Position
1051361..1052824
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AA seq
487 aa
AA seq
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MPMPLNQLLPAANGSVLIRELTLDSRKVRPGDLFLAVPGTQQDGRVHIVDAIARGAAAVA
YEAEGAAEMHAESAVLVPVKGLSGQLSAIAGRFYGEPSRGLHLVGITGTNGKTSVSQLLA
QALDLLGQPCGIVGTLGNGFHGALEQGKHTTPDPVGVQATLASLKQAGARAVAMEVSSHG
LDQGRVAALEFDVAVFTNLSRDHLDYHGSMEAYGAAKARLFTWPNLSCRVLNLDDAFGRE
LAAQAHESRLIGYSLEDSTAYLYCSDAQFDDHGVRARLLTPRGEGVLRSSLLGRFNLSNL
LAVVGALLGMDYALDEILKVLPQLQGPVGRMQRLGGADKPLVVVDYAHTPDALEKVLQAM
RPHVEGRLVCLFGCGGDRDRGKRPLMAAVAERLADVVWVTDDNPRTEDPAQIIEDIRAGF
AAPEAVQFVHGRGDAIARLIAQADAADVLVLAGKGHEDYQEIMGVRQPFSDLSEANKALA
AWEAAHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgccgctcaatcaactgttgccggccgccaatggcagcgtgctgattcgtgag
ctgacgctggacagccgcaaggtgcgtccgggtgatctgttcctggccgtgcccggcacc
cagcaggatggccgtgtacatatcgtcgatgcgatcgcgcgcggcgcggctgcggtcgcc
tacgaggccgagggcgctgccgagatgcatgccgagagcgccgtgctggtgccggtcaag
ggcctgtctggccagctctcggccatcgccggacgcttctatggcgagccgagccgtggc
ctgcacctggtcggcatcacgggcaccaatggcaagaccagtgtcagccagttgctggcg
caggccctcgacctgctcggccagccgtgtggcatcgtcggtaccctgggtaacggtttc
catggtgcgctggagcagggcaagcacaccacgcccgatccggtcggtgtacaggcgacc
ctggcctcgctcaagcaggccggtgcgcgcgccgtcgccatggaggtgtcctcccatggc
ctggaccaggggcgggtcgccgcgctggaattcgatgtcgcggtgttcaccaacctgtcg
cgtgaccacctcgactatcacggcagcatggaggcctacggcgctgccaaggccaggctg
ttcacctggccgaacctgagttgccgggtgctcaacctcgatgacgccttcggtcgtgag
ctggctgcgcaggcgcacgagtcgcgtctgatcggctacagcctggaagacagtaccgcc
tacctctattgcagcgacgcgcagttcgacgatcacggcgtgcgtgcgcgcctgctcacg
ccccgtggcgaaggcgtgctgcgcagcagcctgctcggtcgtttcaacctgagcaacctg
ctcgccgtggtcggtgccctgctcggcatggactacgcgctcgacgagattctcaaggtg
ctgccgcagctgcaggggccggttggccgcatgcagcgactcggtggcgccgacaaaccg
ctggtggtggtcgactacgcgcacacgccggatgccctggaaaaggtgctgcaagccatg
cgcccgcatgtcgaagggcgcctggtctgcctgttcggctgtggcggtgaccgtgatcgc
ggcaagcgcccgctgatggccgccgtggccgagcgcctggcggacgtggtctgggtgacc
gacgacaatccgcgcaccgaggacccggcacagatcatcgaggatatccgcgccggtttc
gccgcgccggaggcggtgcagttcgttcacggtcgtggcgacgccatcgccaggctgatt
gcccaggccgatgccgccgatgtgctggtgctggccggcaagggccacgaggattaccag
gaaatcatgggcgtgcgtcagccgttctcggacctcagcgaagcgaacaaggccctggcg
gcctgggaggcggctcatgcttaa
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