Ectopseudomonas khazarica: JLK41_13520
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Entry
JLK41_13520 CDS
T07269
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
pkh
Ectopseudomonas khazarica
Pathway
pkh00270
Cysteine and methionine metabolism
pkh00450
Selenocompound metabolism
pkh00670
One carbon pool by folate
pkh01100
Metabolic pathways
pkh01110
Biosynthesis of secondary metabolites
pkh01230
Biosynthesis of amino acids
pkh04980
Cobalamin transport and metabolism
pkh04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pkh00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
JLK41_13520 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
JLK41_13520 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JLK41_13520 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JLK41_13520 (metH)
04980 Cobalamin transport and metabolism
JLK41_13520 (metH)
Enzymes [BR:
pkh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
JLK41_13520 (metH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QTS84364
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Position
2828119..2831829
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AA seq
1236 aa
AA seq
DB search
MSDRSARLQALQQALKERILILDGGMGTMIQSYKLEEADYRGERFADWPSDVKGNNDLLL
LTQPKVIAEIEKAYLDAGADILETNTFNATQVSQADYGMESLVYELNVAGARVAREVCDA
KTLETPDRPRFVAGVLGPTSRTCSISPDVNDPGYRNVTFDELVDNYTEATRGLIEGGADL
ILIETIFDTLNAKAAIFAVQQVFEEDGVELPIMISGTITDASGRTLSGQTTEAFWNSVRH
AKPISVGLNCALGAKELRPYLAELAAKADTQVSAHPNAGLPNAFGEYDETPEQMAAVVEE
FAASGLLNIIGGCCGTTPPHIKAIAEAVAKHAPRVIPEIPKACRLSGLEPFTIDRSSLFV
NVGERTNITGSAKFARLIREENYTEALEVALQQVEAGAQVIDINMDEGMLDSQAAMVRFL
NLIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEAFKHHARLCKRYG
AAVVVMAFDEVGQADTAARKREICQRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNN
YAVDFIEACAYIRDELPYALSSGGVSNVSFSFRGNNPVREAIHSVFLYYAIQNGLTMGIV
NAGQLEIYDEIPRELRDAVEDVVLNRNDGATEALLAIADKFKGDGTAKEVENEEWRSLPV
GKRLEHALVKGITAFIVEDTEECRQQCARPIEVIEGPLMSGMNVVGDLFGSGKMFLPQVV
KSARVMKQAVAHLIPFIEAEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIV
DLGVMVPAEKILQTARDEKCDIIGLSGLITPSLDEMVHVAKEMQRQGFNLPLMIGGATTS
KAHTAVKIDPQYSNDAVVYVTDASRAVGVATQLLSKELKSDFVQKTRDEYVVVRERTSAR
ASRTERLGYADAIANKPAFDWASYVAPKPGFTGARVLDDIDLATLVEYIDWTPFFISWDL
AGKYPRILTDEVVGEAATSLFNDAQALLKKLIDEKLIKARAVFGFWPANQVAHDDIEVYG
DGGEKLATLHHLRQQTIKPDGKPNLSLADFVAPKESGKTDYVGGFITTAGIGAEEVAKAY
EAKGDDYNSIMVKALADRLAEACAEWLHERVRKEYWGYAAGEQLDNEALIREQYNGIRPA
PGYPACPDHTEKATLFKLLDPEADYHKAGRSGVFLTEHYAMFPAAAVSGWYFAHPEAQYF
AVGKVDKDQIEQYSKRKGQDIGVSERWLMPNLGYDD
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcgcagcgcccgcctacaagccctccagcaagcactgaaggagcgcatcctg
atcctcgatggtggcatgggcaccatgatccagagctacaagctggaagaagccgattac
cgtggcgagcgcttcgccgactggccgagcgacgtcaagggcaacaacgacctgctgctg
ctgacccagccgaaggtcatcgccgagatcgagaaggcctacctggatgccggcgccgat
atcctggaaaccaacaccttcaacgctacccaggtgtcgcaggccgactacggcatggag
tcgctggtctacgaactgaacgtggccggcgcccgcgtggcccgtgaggtctgcgatgcc
aagaccctggaaacgccggatcgcccgcgcttcgtggccggcgtgctcggcccgaccagc
cgcacctgctcgatctccccggacgtcaatgaccccggctaccgcaacgtcaccttcgac
gagctggtggacaactacaccgaagccacgcgcggcctgatcgagggcggcgccgacctg
atcctgatcgagaccatcttcgacaccctgaacgccaaggcggcgatcttcgccgtgcag
caggtgttcgaggaagatggcgtcgaactgccgatcatgatctccggcaccatcaccgac
gcgtccggccggaccctgtccgggcagaccaccgaagccttctggaactcggtgcgccac
gccaagccgatctccgtcggcctgaactgcgccctcggtgccaaggagctgcggccgtac
ctggccgaactggccgccaaggccgacacccaggtttccgctcaccccaacgccggcctg
cccaatgccttcggtgagtacgacgagaccccggagcagatggcagcggtggtcgaggag
ttcgccgccagcggcctgctcaacatcatcggcggctgctgcggcaccaccccgccgcac
atcaaggcgatcgccgaggcggtggccaagcatgccccgcgcgtcatcccggagattccc
aaggcctgccgcctgtccggcctggagcccttcaccatcgatcgcagctcgctgttcgtc
aacgtcggcgagcgtaccaacatcaccggttcggccaagttcgcccggctgatccgcgag
gagaactacaccgaagccctggaggtcgccctgcagcaggtggaagccggcgcccaggtg
atcgacatcaacatggacgaagggatgctcgattcccaggcggccatggtccgtttcctc
aacctgatcgccggtgagccggacatctcgcgcgtaccgatcatgatcgactcctccaag
tgggaggtgatcgaagcgggcctcaagtgcatccagggcaagggcatcgtcaactccatc
tccatgaaggaaggcgtcgaggcattcaagcaccacgcccgcctgtgcaagcgctacggt
gccgccgtggtggtcatggccttcgacgaggtcggccaggccgataccgctgcgcgcaag
agggaaatctgccagcgcagctacgacatcctggtcaatgaagtgggcttcccgccggaa
gacatcatcttcgacccgaacatcttcgccgtcgccaccggcatcgaggagcacaacaac
tacgcggtggacttcatcgaggcctgcgcctatatacgtgacgagctgccctacgcgctc
agctccggcggtgtgtccaacgtgtcgttctccttccgcggcaacaacccggtgcgcgaa
gcgatccactcggtgttcctctactacgcgatccagaacggcctgaccatgggcatcgtc
aacgccggccagctggaaatctacgacgagattccgagagagctgcgtgacgcggtcgag
gacgtggtgctcaaccgcaacgacggcgccaccgaggcgctgctggccatcgccgacaag
ttcaaaggcgacggcacagccaaggaagtggagaacgaggaatggcgctcgctgccggtc
ggcaagcgcctggagcacgcgctggtcaagggcatcaccgccttcatcgtcgaggacacc
gaggaatgccgccagcagtgcgcgcgccccatcgaagtcatcgaaggtccgctgatgagc
ggcatgaacgtggtcggcgacctgttcggctcgggcaagatgttcctgccgcaggtggtc
aagtccgcccgcgtgatgaagcaggcggtggcgcacctgatccccttcatcgaagcggaa
aaaggcgacaagccggaggccaagggcaagatcctcatggccacggtcaagggcgacgtg
cacgacatcggcaagaacatcgtcggcgtggtactcggctgcaacggctacgacatcgtc
gacctcggcgtgatggtgccggcggagaagatcctgcagaccgccagggatgagaagtgc
gacatcatcggcctctccggcctgatcaccccgtcgctggacgagatggtgcacgtggcc
aaggagatgcagcgccagggcttcaacctgccgctgatgatcggcggcgccaccacctcc
aaggcgcacactgcggtgaagatcgacccgcagtacagcaacgacgccgtggtctatgtc
accgacgcctcgcgtgccgtgggcgtggcgacccagttgctgtcgaaggagctgaagagc
gacttcgtgcagaagacccgcgacgaatacgtggtggtgcgtgagcgcacctcggcccgc
gcctcgcgcaccgagcgcctgggctatgccgacgccatcgccaacaagccggccttcgac
tgggccagctacgtagcaccgaagccaggcttcaccggtgcccgcgtgctggacgacatc
gatctggcgaccctggtcgagtacatcgactggacgccgttcttcatctcctgggacctg
gccggcaagtacccgcgcattctcaccgacgaggtcgtcggcgaagcggccaccagcctg
ttcaacgacgcccaggcgctgctgaagaagctgatcgacgagaaactgatcaaggctcgc
gctgtgttcggtttctggccggccaaccaggtcgcccacgacgacatcgaggtctacggc
gacggcggcgagaaactggccaccctgcatcacctgcgccagcagaccatcaagccggac
ggcaagccgaacctgtccctggccgacttcgtcgcgccgaaggaaagcggcaagaccgat
tatgtcggcggcttcatcaccaccgccggcatcggcgccgaggaagtggcaaaggcctac
gaggccaagggcgacgactacaactcgatcatggtcaaggcgctggccgaccgtctggcc
gaagcctgcgccgagtggctgcacgaacgtgtgcgcaaggagtactggggctacgccgca
ggcgagcaactggacaacgaagcgctgattcgcgagcagtacaacggcatccgcccggcg
cccggctacccggcgtgcccggatcacaccgagaaagccacgctgttcaagctgctcgac
cccgaggccgactaccacaaggccggccgtagcggtgtgttcctcaccgagcactacgcc
atgttcccggcggcggcggtatccggctggtacttcgcgcatcccgaggcgcagtacttc
gccgtcggcaaggtggacaaggaccagatcgagcagtacagcaagcgcaaggggcaggac
atcggcgtcagcgaacgctggctgatgcccaatctcggctacgacgactga
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