Paramormyrops kingsleyae: 111856015
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Entry
111856015 CDS
T05788
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111856015 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pki03041
]
111856015 (eftud2)
Spliceosome [BR:
pki03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
111856015 (eftud2)
Complex C
U5 SnRNP specific factors
111856015 (eftud2)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
111856015
NCBI-ProteinID:
XP_023691375
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MEADLYDEFGNYIGPELDSDEDDDVEAEDRDADEADEDDDDEQGDADEDVPGMEVVLHED
KKYYSTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKQFTLMEQELPVTVYEMEFLADL
MDSPELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDLDLRYTDILFTEQERGVGIK
STPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSGIRISDGVVLFIDAAEGVMLNTERL
IKHAVQERLAITVCINKVDRLILELKLPPTDAYYKLRHIVDEVNGMLSTYSTDESVVVSP
LLGNVCFASSQYSICFTLGSFAKIYSDTHGDINYNEFAKRLWGDIYFNPKTRKFTKKAPS
SNSQRSFVEFVLEPLYKILSQVVGDVDTSLPRVLDELGIHLTKDELKLNIRPLLRLVSNR
FFGEFTGFVDMCVQHIPSPQTGARSKIEHSYTGGLDSDLGEAMLECDPDVDSEVTVTFPR
RGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSVFHHWQIVPGDPLD
KSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLELAKQDVLLNYPM
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggacctgtacgacgaattcggaaattacattgggccagagctagattcagac
gaagatgatgatgtggaagccgaggatcgcgatgccgatgaggcagatgaggatgacgac
gatgagcagggagatgctgacgaggatgttccagggatggaggtggtgctgcatgaggac
aagaagtactactccacagcagaagaagtgtatgggccagaggtggagactattgtccag
gaagaggacacacaacccctcacagagcccatcatcaaacctgtcaaaaccaaacagttc
accctgatggagcaggagctgccggttacagtctatgaaatggaattcctggcagacctg
atggacagtcccgaactgatccgcaacgtcacgctgtgcggccacttgcaccacggcaag
acttgtttcgtggattgcctgatcgaacagacccacccggagatccgtaagcgagacgac
ttggatctgcgttatacggacattctcttcactgagcaggagcgaggggtgggaatcaaa
agcacacctgttaccatggtattgccggactccaggggtaaatcctacctcttcaacatc
atggacaccccaggacacgtcaacttctcggacgaggtcacctccgggatccggatctcc
gacggcgtcgttctcttcatcgacgcggcagaaggcgtgatgctgaacacggagcggctg
atcaagcacgccgtgcaggagcggctggccatcaccgtctgcatcaacaaggtggatcgg
ctgatcctggagctgaagctgccgcccactgacgcctactacaagctgcgccacatcgtg
gacgaggtcaacggcatgctcagtacatactcgacggacgagagcgtggtggtgtcccca
ctcctgggaaacgtctgcttcgccagctcacagtacagcatctgcttcaccctgggctct
ttcgccaagatctactccgacacccacggggacattaactacaacgagttcgccaaacgt
ctgtggggtgacatttacttcaaccctaaaacgcgcaagttcacaaaaaaggctcccagc
agcaactcgcagcgaagcttcgtagagttcgtcctagagcccctctacaaaatcctgtcc
caggtggtgggggacgtggacacctcgctgccgcgggtgctggacgagctgggcatccac
ctgacgaaggatgagctcaagctgaacatccggccgttgctgcggctcgtctccaaccgc
tttttcggcgagttcacgggctttgtggatatgtgtgtacagcacatcccttctcctcag
acgggggcccggagcaaaattgagcacagctacacgggaggcctggactcggacctgggg
gaggccatgctggagtgcgaccctgatgtggactctgaagtgaccgtgacatttccccgt
aggggtcatgtgacgcaggacgctcccattcccggctcccccctctacaccatcaaggcc
ttcatcccggccatcgactcctttggcttcgagacggacctgcgcacccacacccagggc
caggccttcgccctctccgtcttccaccactggcagattgtccccggagatccgctggac
aagagcatcgtgatccgacccctggagccgcagccggcgcctcacctggccagggagttc
atgatcaagacgcggcggcggaagggtctgagcgaggatgtcagcatcagcaagttcttc
gacgaccccatgttgctggagctggccaaacaggacgtgttgctcaactaccccatgtga
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