Pipistrellus kuhlii (Kuhl's pipistrelle): 118707448
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Entry
118707448 CDS
T07682
Symbol
SMCHD1
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1 isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pkl03036
]
118707448 (SMCHD1)
03400 DNA repair and recombination proteins [BR:
pkl03400
]
118707448 (SMCHD1)
Chromosome and associated proteins [BR:
pkl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
118707448 (SMCHD1)
DNA repair and recombination proteins [BR:
pkl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
118707448 (SMCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCHD1_S5
SMC_hinge
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
118707448
NCBI-ProteinID:
XP_036273619
LinkDB
All DBs
Position
Unknown
AA seq
2008 aa
AA seq
DB search
MAAAGGGGGGGGPSAGAGRGGRGDRSRKVYVFDRREKESQQGERLLQVGERLDFAGFRAA
VCQRLGISPEEKFVITTTSRKEITSDNFDETVKDGVTLYLLKSVDQLLLTATKERIEFLP
HYDTLVKSGMYEYYASEGQNPLPFALAELIDNSLSATSRNTGIRKIQIKLHFDETQGKPA
VAVIDNGRGMTSKQLNNWAVYRLSKFTRQGDFESDHSGYVRPVPVPRSLNSDISYFGVGG
KQAVFFVGQSARMISKPADSQDVHELLISKEDFEKKEKNNESIYSGFIRNRKPSDSVHIT
NDDERFLHCLISEEKEKKSFTAVVITGVQPEHILYLKNYFHLWTRQLAHIYHYYIHGPKG
NEKHTSKEVGPFNNIDIEISMFEKGKAPKIVNLREIQDDMQTLYINTATDSFEFKAHVEG
DGVVEGIIRYHPFLYDRETYPDDPCFPSKLKDEDDDEDCYIIEKGARGKRPIFECFWNGR
LIPYTSVEDFDWCAPPKKRGLAPIECYNRISGALFTNDRFQVSTNKLTFMDLELKLKDKN
TLFTRISNGQEQRVKIDREFSFWLKDCHEKYDKQIKFTLFKGIITRPDLPARKQGPWATY
SAIEWDGKIYKAGQLVKTIKTLPLYYGSIEKFFLYGNHDGEVYATGGEVQIAMEPRALYD
ETKVVPIAKLDRTFAEKAVKKYVEDEMARLPDRLSVTWPEGDELFPNEIRPAGTTIGALR
IEILNKKGEAMQKLPGTGHGGSKKLLVELKVILHTSSGNKEIISHISQHGGKWPYWFKKM
ENIQKLGNYTLKLQVVLNESNADTYAGRPLPSKAIKFSVKEGKPEKFSFGLLDSPFRIGV
PFNIPLEFQDEFGHASQLINDIQPVLEASGLSLQYEGITKGPNCIIRGVTAKGPVNSCQG
KTFNLKVILPGFKEDSQILKVRFLPGPPHQLKVKPDSEFLVIENGTAFPFQVEVLDESGN
ITTTQSKLVVHCKFSGAPNLPLYTVDCSSSGTSILSGPAIQVQNIKKDQTLKAKIEIPSC
KDVAPVEKTIKLLPSSHVARLQIFSVEGQKAIQIKHQDEVTWIAGDVMRNLIFQMYDEGE
REIHVTPTLAEKIKVNWTPEISKEQLLKGLLPDVQVPTSVKDMRYCQVSFQDDHVSLESA
FTVRPLPDEPKYLKCELKGAKAVQMGQELQGEIVVIVTDQYGNLIQAFSPSSLSALGIAG
TGLDSSQLKTTFQENTQSISVRGIKFIPGPPGNKELCFTWREFSDFIRVQLISGPPAKLL
LIDWPELKESVPVINGKELQHPLIVQLCDQWDNPAPVPQVKINIIKANNLKLTPSNQQYK
TDERGRANLGVFSVYAPRGKHTMQVKAIHNRNTIEGPIIKLMILPDPEKPIRLNVKYDKD
TLFLAGGIFTDFMITVISEDDSIIKNINPARITMKMWKHSNNGNRPPANAETFSCNKIKG
NDKEDGCFYFRDKAIPNKVGTYCIQFVFTMDKALILNSEQIIVDVQPNQPVKLVPKIQPA
TPAVSNVHSVANRTLVKDLHLIVTDEFNNQTGLDLVGTIIATIKGSNEEDTDTPLFIGKV
RTLEFPFVKGSADITSLVLAENSPGKDSTEYFIIFEPQLPDLSRSLESYILPFMFSNDVK
KQQQMLAFAKQKDELSQSIEMYRTVFETSKQLIDEMKCQVEVAKSKEAQLRNELKTNNID
IPTTQQVPYIEAVLKRKILEQEELKKKPRRSCTLPNYTKSSGNVLGKIAHLAQIEDDRAA
MVISWHLASDMDCVVTLTTDAARRIYDETQGRQQVLPLDSIYKKTLPDWRRPLPHYRNGK
LYFRPIGDPVFARDLLTFPDNVEHCETVFGMLLGDTIILDNLDAANHYRREVVKITHCPT
LLTRDGDRIRSNGKFGGLQNKAPPMDKLRGMVFGAPVPKQCLVLGQQIDLLQQYRNALDK
LNSLTKELNSELEYLQSPEMKKKKQELDEREKTLKLMEQQLLGITPMRKCSDSLFHPAKV
EMADCPNPPKRMRREITRQNRTVTKTNV
NT seq
6027 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcgggcggcggcggcggcggcggcgggccctcggcgggggctggaaggggc
ggccgcggcgaccgcagcaggaaggtgtacgtgttcgaccggcgcgagaaggagtcgcag
cagggcgagcggctgctgcaggtcggcgagcgcttggacttcgcggggttccgcgccgcc
gtgtgccagagacttggcatttcacctgaggaaaaatttgttattacaacaacaagtagg
aaagaaattaccagtgataattttgatgaaactgttaaagatggagttactttatactta
ctaaagtcagtcgaccaattactactaacagctacaaaagaaagaattgaattcctacct
cactatgacacactggttaaaagtggcatgtatgaatattatgcaagtgaaggacaaaac
cctttgccatttgctcttgcagagttaattgacaattcgttgtctgctacttctcgtaac
actgggattagaaaaatacagatcaaattgcattttgatgaaacacaaggaaaacctgct
gtcgcagtgatagataacggaagaggaatgacctctaaacagcttaataactgggctgtg
tatagattgtccaagtttacaaggcaaggagattttgaaagtgatcattcaggatatgtt
cgaccagtaccagtgccacgcagtttaaatagtgatatttcctattttggtgttggaggc
aagcaggctgttttctttgttggacaatcagccagaatgataagcaaacctgcagattcc
caagatgttcacgagcttctgatttctaaagaagattttgagaagaaggagaaaaataat
gagtcaatatatagtggatttattagaaacagaaagccatctgactctgttcacattaca
aatgatgatgaaagatttctacattgtcttatctcagaggaaaaggaaaaaaaaagcttt
actgctgtggttatcacaggagtacaaccagaacatatcctgtacttgaaaaattatttc
catctttggacaagacagttagcgcatatttatcattactatattcatggcccaaaagga
aatgaaaaacatacatcaaaagaagttggacctttcaacaacattgatattgaaatttct
atgtttgaaaaagggaaggcacctaagattgtcaacctaagggaaatacaagatgacatg
cagacgttgtatataaacacagcaactgatagttttgagttcaaagctcacgttgaagga
gacggtgtagtggaagggattatccgatatcaccctttcttatatgatagagaaacttac
cctgatgatccatgctttccatcaaaattaaaagatgaagatgatgatgaggattgttat
ataattgagaaaggtgcaagagggaaaaggcctatttttgaatgtttttggaatggacgt
ctgataccatatacatctgttgaagactttgactggtgtgctcctcctaagaagagaggg
cttgcaccaatcgagtgttacaatagaatatctggtgcattattcactaatgacagattc
caggtcagcacaaataaactgacttttatggatcttgagctaaaattgaaagataagaac
actctttttacaaggatttcaaatggacaggagcagcgagtgaaaattgacagagaattt
tctttctggctcaaagactgtcatgaaaagtatgacaaacaaataaaatttacacttttt
aaaggaataatcacacgccctgatcttcctgctagaaaacagggcccctgggccacatac
tcagcaatagaatgggatggaaaaatatacaaagcaggacagctggtgaagacaatcaag
acacttcctctttattatggaagcatagaaaaattttttctttatggtaatcatgatgga
gaagtatatgctactggaggagaggttcaaattgcaatggaacctcgagcactgtatgat
gaaacaaaagttgtgccaattgcaaaactggataggacctttgctgagaaagctgtaaaa
aaatacgtagaagatgaaatggcaaggcttcctgatagattgtcagtaacttggcctgaa
ggagatgaattatttcccaatgagattaggcctgctggaaccaccattggtgcattaagg
attgaaatactgaataaaaaaggagaagcgatgcaaaagcttccaggaacaggtcatgga
gggtcaaaaaaactcctagttgagctcaaagttatattacacacttcaagtggaaataaa
gaaatcatttcacatatcagtcaacatggaggaaaatggccttactggtttaaaaaaatg
gaaaatattcaaaaattggggaattacacattgaaattacaagttgtattgaatgaaagt
aatgcagacacttatgctggaagaccactaccatctaaagcaattaaattttctgttaaa
gagggtaagccagaaaaattttcatttggtcttctggattctccttttcgtattggagtt
ccattcaacatccctctggagtttcaggatgaatttggtcatgctagtcaattaataaat
gatattcagccagttcttgaagcaagtggtttatctttacaatatgaaggaataacaaag
ggaccaaattgtataattcgaggtgttacagctaagggacctgtaaactcttgtcaaggc
aagacttttaatctgaaggttattcttccgggttttaaagaagattcacagattttgaaa
gttagattcctaccaggtccccctcatcaattgaaagtgaaacctgattctgaattttta
gttatagaaaatggaacggctttcccatttcaggtagaagttttggatgaatcaggcaat
ataacaacaacacaatcaaaattggttgttcattgtaagttttcaggtgctcctaacctt
ccactctacactgtggattgcagtagttctggaaccagtattttatcaggacctgccatt
caagttcagaatattaaaaaagaccagacgcttaaagctaaaattgaaatacctagttgt
aaagatgtggcacctgtggagaaaacgattaagttgcttcccagtagccatgttgcaaga
ttacagatattcagtgtggaaggacaaaaggcaatccagatcaaacaccaagatgaggtt
acttggatagcaggcgatgttatgcgtaatcttatctttcaaatgtatgatgaaggagaa
agagaaatccatgtaacaccaactttagcagagaaaattaaagttaactggactcctgag
attagcaaagaacagttgctgaaaggtctgcttcctgatgtacaagtaccaacatctgta
aaagatatgcgctattgccaggtttcatttcaagatgatcatgtgtctttggaaagtgca
tttacagtaagacccctacctgatgaacctaaatatctaaagtgtgagttgaaaggagca
aaagcagtacagatgggccaagagcttcaaggggaaatagttgtaatagttacagatcag
tatggaaatctgattcaagcattttcaccaagttctttatctgccttgggaattgctggt
actggacttgatagctcacagttgaaaactacctttcaggaaaatacacagagtataagt
gtaagaggcatcaaatttattccaggtcctcctggaaataaggaactttgttttacttgg
cgtgagttttctgattttattcgagtacagctaatttctggaccaccagctaaacttctc
cttatagattggccagaattaaaggagtctgttccagtgattaatggaaaagaattacag
catcctctcattgttcaactttgtgatcagtgggataatccagcacctgtaccacaggtt
aaaataaatatcataaaagctaacaatttaaagctcactccttcaaaccaacagtataaa
actgatgaaaggggcagggctaatttgggagtgttcagtgtttatgcccctagaggaaaa
catactatgcaggtgaaagccatccataacaggaataccatagaaggacctataattaag
ttaatgattcttccagaccctgaaaaacccattcgtctcaatgttaaatatgacaaagat
actttatttttagcagggggtattttcactgattttatgattactgttatttctgaagat
gatagcatcattaaaaatattaatccagcacgtattaccatgaaaatgtggaagcactct
aacaatgggaaccgaccaccagcaaatgcagaaacatttagttgtaataaaataaaaggt
aatgacaaggaagatggctgcttctacttcagggataaagcaattcctaataaagtgggg
acatattgtatccagtttgtttttacgatggataaagcacttattcttaacagtgaacag
attatagttgatgttcaacctaatcaacctgtgaagttagtacctaaaattcagccagcc
acaccagctgtttcaaatgttcactcagttgccaataggaccctggtcaaagatttacat
ctaattgtcacggatgagttcaacaatcagactggacttgatttggttggcactataata
gctaccatcaaaggttctaatgaggaagatactgatacaccactctttatcgggaaagtc
agaacacttgaattcccttttgtaaaaggttccgctgatatcacgagtctagtgctggca
gaaaatagtcctggaaaagatagtactgaatactttattatatttgagcctcagctacca
gatttatcaagatcattagaatcatatattctaccatttatgttttctaatgatgttaag
aagcagcaacaaatgctagcatttgcaaaacaaaaggatgaattatctcaatctattgaa
atgtatagaactgtatttgaaaccagcaaacagcttattgatgaaatgaagtgccaagtt
gaagtagcaaaatcaaaagaggcccagttgcgaaatgaactaaaaacaaataatattgac
attcctacaacacaacaggtgccatacattgaagcagttttaaaaagaaagatattagaa
caagaagaactaaagaaaaagccaagaagatcatgtacccttccaaactatactaaaagc
agtggaaatgttttgggaaagattgcacacctggcacaaattgaagatgatagagctgca
atggttatttcttggcatctggcaagtgatatggattgtgttgtcaccttgaccactgat
gctgcgcgtcgtatctatgacgaaacccaaggtcgtcagcaagtgttgccacttgattct
atttataagaagactcttccagattggagaagacctttgcctcattaccgaaatggaaaa
ttatattttagacccattggagatccagtctttgcccgagatttgttaacgtttccagat
aacgtagaacattgtgaaacagtgtttggtatgctattaggagacaccattattttggat
aatttggatgctgccaatcattatagaagagaggttgttaagatcacacactgccctaca
ctgctcacaagagatggagatcgcattcgaagtaatggaaagtttgggggccttcagaat
aaagctcccccaatggacaaacttcggggaatggtatttggagctccagtaccaaagcag
tgcctggtcttagggcaacaaatagatcttcttcaacagtatcgtaatgctctggacaag
ttgaacagtttgaccaaggaacttaacagtgaattagagtacctgcaatctccagaaatg
aagaagaaaaaacaagaacttgatgaacgagagaaaactctgaaactaatggagcaacag
cttctaggtataactcccatgcgtaagtgcagtgactccttatttcatccagcaaaggtt
gaaatggcagattgtccaaatcctcctaaaagaatgagaagagaaattacaagacaaaat
agaactgtaaccaaaacaaatgtgtga
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