Pipistrellus kuhlii (Kuhl's pipistrelle): 118716422
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Entry
118716422 CDS
T07682
Symbol
DDX58
Name
(RefSeq) antiviral innate immune response receptor RIG-I isoform X1
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Pathway
pkl04064
NF-kappa B signaling pathway
pkl04622
RIG-I-like receptor signaling pathway
pkl04623
Cytosolic DNA-sensing pathway
pkl05160
Hepatitis C
pkl05161
Hepatitis B
pkl05162
Measles
pkl05164
Influenza A
pkl05168
Herpes simplex virus 1 infection
pkl05169
Epstein-Barr virus infection
pkl05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
118716422 (DDX58)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
118716422 (DDX58)
04623 Cytosolic DNA-sensing pathway
118716422 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
118716422 (DDX58)
05160 Hepatitis C
118716422 (DDX58)
05171 Coronavirus disease - COVID-19
118716422 (DDX58)
05164 Influenza A
118716422 (DDX58)
05162 Measles
118716422 (DDX58)
05168 Herpes simplex virus 1 infection
118716422 (DDX58)
05169 Epstein-Barr virus infection
118716422 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pkl04054
]
118716422 (DDX58)
Enzymes [BR:
pkl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118716422 (DDX58)
Pattern recognition receptors [BR:
pkl04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
118716422 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_25
PhoH
Motif
Other DBs
NCBI-GeneID:
118716422
NCBI-ProteinID:
XP_036289492
LinkDB
All DBs
Position
Unknown
AA seq
928 aa
AA seq
DB search
MTAEERRNLHAFRDYVTRILDPTHVLSYMAPWLREDEVQYVQAEKNNKGVTEAATLFLKF
LLGLQEEGWFRGFLDALHHAGYSGLYEAIENWDFHKIEKLEEHRLLLRRLQPEFKTRINP
NDILPEISECLINQECEEIRQVCSNKGPMAGAEKLIECLLRSDKENWPKHLKLALEKEES
NFSELWIVEKGAKEETKELEDEEVETSDIQIFYKEEPECQNLSQNACPPSEVAHTQSPIK
PRNYQLELAGPALEGKNTIICAPTGCGKTFVALLICEHHLQKFPQGQKGKVVFFANQLPV
YEQQKNVFLKHFERYGYKIAGISGAMVENISVEQIVENNDIIILTPQILVNGLKNRTIPS
LSVFTLMIFDECHNTSKRHPYNVIMFHYLDQKLGGSSDPLPQVIGLTASVGVGDAKNTTE
AMEYICKLCASLDTSVLATVRDNVEELKEIVYKPQKFFRKVKSRTNNRFKSVISELMRET
ESLAKSVFGELGTVSLETLSQIQNRDFGTQRYEQWIMTFQKKCSVLRLQDKDKESRICRA
LFLYTSHLRILNDALIINEHARTKDALEYLKGFFNNVRTAGFDEIEQGLTRRFEERLQEL
ESISVDPSNENPKLKDLCFILQEEYHLNPETRTILFVKTRGLVDALKKWIEENSKLTFLK
PEILTGRGKTTKDRGMTLPAQKCVLDAFRAHGEKKILIATSVADEGIDIAQCNLVILYEY
VGNVIRMIQTRGRGRARGSKCFLVTSNADVIEKEKINLYKEKMMNDSILSLQEWDEKAFK
KKIHQIQIHEKFIRDSQGKAEPKLDKKNKKLLCRKCKAFACHTADIRVIEESHYTVVGDA
FKECFVTKLHPKPKSVGIFEKKAKVFCARQNCSHDWGIHVKYKTFEIPIIKIESFVVEDI
ATGEQRLYAKWRDFHFEKLPFDPAEMSK
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgaggagcggcgcaacctgcacgccttccgcgactatgtcaccaggatcctg
gacccgacccacgtcctcagctacatggcgccctggctcagggaggatgaggtgcagtat
gttcaagctgagaaaaacaacaagggtgtgacggaggctgccacactctttctcaagttc
ctattggggctgcaggaggagggctggtttcgtggctttttggatgctcttcaccatgca
ggttattctggactttatgaagccattgaaaattgggatttccacaaaatagaaaagttg
gaggagcatagattgcttttaaggcggttgcaaccagaatttaaaaccagaattaatcca
aatgatatccttcctgaaatatccgaatgtttaattaaccaggaatgtgaagaaattaga
caggtttgttccaacaaggggccgatggcaggtgcggagaagctgattgagtgccttctc
agatcagacaaggagaactggcccaaacacttgaaactcgctttggaaaaagaagagagc
aatttcagtgagctgtggattgtggagaaaggtgcaaaagaggaaacgaaagagcttgag
gatgaggaagtggaaacttcggacatacagattttctacaaggaggaaccggaatgccag
aatcttagtcagaatgcatgtccaccttcagaagtggctcatactcagagcccaataaag
ccacgaaattaccaactagagctcgctggtcctgctctagaaggaaaaaacacaatcata
tgtgctcctactggctgtgggaaaacctttgttgcacttctcatatgtgagcatcatctt
cagaaatttccacaaggacaaaagggaaaggttgtgttttttgctaatcaactcccagtg
tatgaacagcagaaaaacgtcttcttaaaacattttgaaagatatgggtacaaaattgcc
ggcatttctggagccatggttgagaatatctcagtggaacagattgttgagaacaatgac
atcatcattttaacgccacagattcttgtgaacggccttaaaaacaggactattccatca
ctctctgtctttactttgatgatctttgatgaatgccacaacaccagcaagcgccatcct
tacaacgtgatcatgttccattatctagatcagaagcttggaggatcttcagacccactg
ccccaggtcattgggctgacggcctcggtgggcgtcggggatgccaagaacacaacggaa
gccatggagtatatctgcaagctgtgtgcgtctctggacacttccgtgctggcaacagtc
agagacaacgtggaggaactgaaggagatcgtttataagccccagaagtttttcaggaaa
gtgaaatcacggaccaacaacagatttaaaagcgtcatctctgagctgatgagggagaca
gagagcctggcaaagagcgtctttggtgaactcggtaccgtaagtctcgaaaccttgtct
cagattcaaaacagggattttggaacacagaggtatgagcagtggatcatgacgtttcag
aaaaagtgctcggtgctgaggctgcaggacaaagacaaggagagcaggatctgcagagcg
ctgtttttgtacacgtcacatctgcggatacttaacgatgccctcattatcaatgagcac
gcacggacgaaagatgctctggagtacttgaaaggcttcttcaacaacgtccgcacagcc
gggttcgatgagatagagcagggcctcactcggagatttgaagaaaggttgcaagaacta
gagagcatttctgtggatcccagcaacgagaaccctaaactgaaggacctctgcttcatc
ttgcaagaggagtaccacctaaacccagagaccagaaccattctcttcgtgaaaaccaga
ggactggtggatgctttaaagaaatggattgaggaaaattctaaactcacctttctaaaa
cctgagatattgactggacgtggcaaaacaactaaggacagaggaatgaccctcccggca
cagaagtgtgtcctggatgcgttccgagcccacggcgaaaagaagattctgatcgccacc
tccgtggctgacgaaggcatcgacatcgctcagtgcaatctggtcatcctgtacgagtac
gtgggcaatgtcatcaggatgatccaaaccagaggcagaggaagagcaagaggtagcaag
tgcttccttgtgactagtaatgctgatgtgattgaaaaagaaaaaataaacttatacaaa
gaaaaaatgatgaatgactccattcttagcctccaggaatgggatgaaaaagcttttaaa
aaaaagattcaccagatccagattcatgaaaaattcatcagggatagtcaaggaaaagca
gaacctaaacttgataagaaaaataagaaactcctctgcagaaagtgcaaagcctttgct
tgtcatacagcggatataagagtgatagaggaaagccattacactgtggttggagatgct
ttcaaggagtgcttcgtgactaaattacaccccaaaccaaagagtgtgggtatttttgag
aagaaagcaaaggtattctgtgccagacagaactgcagccatgactggggcatccatgtg
aagtacaagacatttgagatcccgatcataaaaattgaaagttttgtggtggaggatatt
gcaactggagagcagagactgtatgcaaagtggagggactttcattttgagaagctgcca
tttgatcctgcagaaatgtccaaatga
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