Pipistrellus kuhlii (Kuhl's pipistrelle): 118725299
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Entry
118725299 CDS
T07682
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Pathway
pkl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118725299 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkl03000
]
118725299 (KDM2B)
04121 Ubiquitin system [BR:
pkl04121
]
118725299 (KDM2B)
03036 Chromosome and associated proteins [BR:
pkl03036
]
118725299 (KDM2B)
Enzymes [BR:
pkl01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
118725299 (KDM2B)
Transcription factors [BR:
pkl03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
118725299 (KDM2B)
Ubiquitin system [BR:
pkl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
118725299 (KDM2B)
Chromosome and associated proteins [BR:
pkl03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
118725299 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
118725299 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
Cupin_8
JmjC
AppA_SCHIC
Motif
Other DBs
NCBI-GeneID:
118725299
NCBI-ProteinID:
XP_036304799
LinkDB
All DBs
Position
Unknown
AA seq
1387 aa
AA seq
DB search
MVGALWRAGCLSPTPAQSPPFPPLLLAPEGGRRGQLGSQSFHFGFPAFPRPIDRQRYDEN
EDVSDVEEIVSARGFSLEEKLRSPLYQGDFVLAMEGKDFNYEYVQREALRVPLIFREKDG
LGIKMPDSDFTVRDVKLLVGSRRLVDVMDVNTQKGTEMSMSQFVRYYETPEAQRDKLYNV
ISLEFSHTKLEHLVKRPTVVDLVDWVDNMWPQHLKEKQMEATNAIAEMKYPKVKKYCLMS
VKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHNLALYEEWVLSGKQSDIFLGDRVE
RCQRIELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILHSFNVPMQLRIYEIEDRTRVQSK
FRYPFYYEMCWYVLERYVYCVTQRSYLTQEYQRESMLIDAPRKPSIDGFSSDSWPEMEEE
SCEQQLQEEEKEEEEEEEEEEEEGAEKVPQPPADGPASPTSIPSEDQEPPGKKPKAPALR
FLRRTLSNESEESVKSATMPADHPRAPTGSPTTEVSAKWTHLTEFELKGLKALVEKLESL
PEHKKCVPEGIEDPQALLEGVKNVLKEHADDDPSLAITGVPVVTWPKKTPKNRAIGRPKG
KLGPASAVKLAANRATAGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCI
MRQCIADFCMICLPLPKNLEEQLSPSSLPPLGHLLQASADPVLPHTAVCLVCGEAGKEDT
VEEEEGKFNLMLMECSICNEIIHPGCLKIKESEGVVNDELPNCWECPKCNHAGKTGKAYK
QKRGPGFKYASNLPGSLLKEQKMNRDNKEGPEPAKRRSECEEAPRRRSDEHPKKVPPDSI
LRRKSDDVHLRRKRKYEKPQEPSGRKRASTLQTSPGSSSHLSPRPPLGSSLSPWWRSSLT
YFQQQLKPGKEDKLFRKKRRSWKNAEDRMALGGKPLRRFKQEPEDELPEAPPKTRESDHS
RSSSPTAGPSTESAEGRDEKKKVKMRRKRRLPNKELSKELSKELNQEIQKTESSLANENH
QPIKSEPESESEEPKRPVGGLCERPHRFSKGLNGASRELRHQLGPGLRSPPRVIARPPPS
VSPPKCIQMERHVIRPPPISPPPDSLPLDDGAAHVMHREVWMAVFSYLSHQDLCVCMRVC
RTWNRWCCDKRLWTRIDLNHCKSITPLMLSGIIRRQPVSLDLSWTNISKKQLSWLINRLP
GLRDLVLSGCSWIAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQMDNR
SKLRNIVELRLAGLDITDASLRLIIRHMPLLSKLHLSYCNHVTDQSINLLTAVGTTTRDS
LTEINLSDCNKVTDQCLSFFKRCGNICHIDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEE
KLLQKLS
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagctttgtggcgggcgggctgcctctctcccactccagcccagagccccccc
ttcccacctcttctccttgcaccggagggcggtcggcgggggcagctggggtctcagtcc
tttcatttcggcttcccagctttcccgcgcccgattgaccgccagcggtacgacgagaac
gaggacgtgtcggacgtggaggagatcgtgagcgcccgcggcttcagcctggaggagaag
ctgcgcagcccgctgtaccagggggacttcgtgctcgccatggagggcaaagatttcaac
tatgagtacgtgcagagagaagctctcagggttcccttgatatttcgagagaaggatgga
ctgggaattaagatgcctgactctgacttcacagtccgagatgtcaaactcctagtgggc
agccggcggctggtggacgtgatggatgtgaacactcagaagggcacggagatgagcatg
tcccagtttgtgcgatactacgagacgccggaggctcagcgggacaagctgtacaacgtc
atcagcctggagttcagccacaccaagctggagcacctggtcaagcgtcccactgtggta
gacctggtggactgggtggacaacatgtggccgcagcacttgaaggagaagcagatggaa
gccaccaacgccattgcagagatgaagtacccgaaagtgaagaagtactgtctgatgagc
gtgaaaggctgtttcactgacttccacatcgactttggaggcacttccgtgtggtaccat
gttttccggggtgggaagatcttctggctgatccctccgaccctgcacaacttggcgctg
tacgaggagtgggtgctgtcgggcaaacagagtgacatcttcctgggagaccgcgtggag
cgctgccagagaatcgagctgaaacagggctacacgtttttcatcccttccggctggatc
catgcagtctacaccccggtagactctctggtgttcggcggaaacatcctgcatagcttt
aacgtgcccatgcagctgcggatttatgagatcgaggacagaacacgggtgcagtccaaa
ttccgctaccccttctactatgagatgtgctggtatgtcttggagagatacgtgtactgt
gtgacccagaggtcttacctcactcaggaataccagagagaatccatgctgattgatgcc
ccaagaaagcccagcatagacggcttctcatccgattcctggccggaaatggaggaggag
tcttgtgagcagcagctccaggaggaggagaaggaggaggaggaggaggaggaagaggag
gaagaagaaggtgcagagaaggtgccccagccacctgccgatggccctgcctcacccacc
agcatcccctctgaggaccaggagccccccgggaagaagcctaaagcacctgccctgcgg
ttcctccggaggactctgtctaatgagtccgaggagagcgtcaagtccgcgacgatgccc
gcagaccacccgagggcgcccacgggctcgcccaccaccgaggtctctgccaagtggacc
cacctcaccgagtttgagctgaagggcttgaaagcgctggtggagaaactggagtccctc
ccggaacacaagaagtgcgtccccgagggcatcgaggacccccaggccctcctggagggc
gtgaagaatgtcctgaaggagcatgctgacgacgaccccagtctggccatcaccggggtc
cccgtggtcacctggccgaagaagactccaaagaaccgggccatagggaggcccaaaggg
aagctgggccccgcctccgcggtgaagttggccgccaaccgggccaccgcgggagctcgc
cggcgccggacgcgatgccgcaagtgcgaggcctgcctgcggaccgagtgcggcgagtgc
cacttctgcaaggacatgaagaagttcgggggccccgggcggatgaagcagagctgcatc
atgcggcagtgcatcgcggatttctgcatgatctgccttcctcttcctaaaaacctcgag
gagcaactgtctccctcatcactcccccccctcggccacttgcttcaggcttcagcagat
ccagtgctaccccacaccgccgtgtgcctagtgtgtggcgaggcggggaaggaagacacg
gtggaggaggaggaaggcaagtttaacctcatgctcatggaatgctccatctgcaacgaa
atcatccaccctggatgccttaagattaaggagtcagagggcgtagtcaacgatgagctt
ccaaactgctgggagtgtcccaagtgtaaccacgctggcaagaccgggaaagcctacaag
caaaagcgtggccccggcttcaagtacgcctccaacctgcccggctcgctgctcaaggaa
cagaagatgaaccgggacaacaaggagggcccggagccggccaagcggaggagcgagtgc
gaggaggcgccccggcgcaggtcggacgagcaccccaagaaggtgcccccggacagcatc
ctgcgccgcaagtcagacgacgtgcacctgaggaggaagcggaaatacgagaagccccaa
gagccaagtggacgcaagcgagcctcgactcttcagacgtcccccggttcctcctctcac
ctctcgccaaggccccctcttggcagcagcctcagcccttggtggagatccagtctcact
tacttccagcagcagctaaaacctggcaaagaagataagcttttcaggaaaaagcggcgg
tcctggaagaacgccgaggaccggatggctctgggcggcaagccgctccggcgcttcaag
caggaacccgaggacgagctgcccgaggcgccccccaagaccagggagagcgaccactcc
cgctccagctcccccacggccgggcccagcaccgagagcgcggagggtcgcgacgagaag
aagaaggtgaagatgcgccggaagcggcggctccccaacaaggagctgagcaaggagctg
agcaaggagctcaaccaggagatccagaagacggagagcagcctggccaacgagaaccac
cagcccatcaagtcggagccggagagcgagagcgaggagcccaagcggccggtgggcggc
ctgtgcgagcgcccgcaccgcttcagcaaggggctcaacggcgcctcccgcgaactgcgg
caccagctggggcccggcctgcgcagcccgccccgcgtcatcgcccggccgcctccctcc
gtgtccccgcccaagtgcatccagatggagcggcacgtgatccgcccgccgcccatcagc
cccccgcccgactcgctgcccctggacgacggggcggcccacgtcatgcaccgggaggtg
tggatggccgtcttcagctacctcagccaccaagacctgtgtgtgtgcatgcgggtctgc
aggacctggaaccgctggtgctgtgataagcggttatggacccgcatcgacctgaaccac
tgcaagtccatcacgcccctgatgctgagcggcatcatccggcgacagcctgtctccctg
gacctcagctggaccaatatctccaagaaacagctgagctggctcatcaaccgtttgcca
gggctccgagacttggtgctgtcaggctgctcatggattgcagtctcggccctctgtacc
tccagttgtccgttgctccggaccctggatgtccagtgggtagaagggctaaaggatgcc
cagatgagagatctcctgtctccgcccacagataacaggccaggtcagatggacaatcgg
agcaaactccgaaacatcgtggagctgcgcctcgcaggcctggacatcaccgacgcctcg
ctgcggctcatcatccgccacatgcccctgctctccaagctccaccttagttactgtaac
cacgtcactgaccagtccatcaacctgctcaccgcagtgggcaccaccacccgggactcc
ttaacagaaatcaacctgtcagactgcaataaggtcactgaccaatgcctgtccttcttc
aagcgctgtgggaatatctgtcatattgacctgaggtactgcaagcaagttaccaaggaa
ggctgtgagcagttcatagctgaaatgtctgtgagtgtccagtttgggcaagtggaagaa
aaactcctgcaaaaactgagttag
DBGET
integrated database retrieval system
