Pempheris klunzingeri: 139201162
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Entry
139201162 CDS
T11454
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
pklu Pempheris klunzingeri
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pklu04040
]
139201162
Ion channels [BR:
pklu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
139201162
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
IQ_SCN5A_C
Na_trans_assoc
GPHH
Motif
Other DBs
NCBI-GeneID:
139201162
NCBI-ProteinID:
XP_070686517
LinkDB
All DBs
Position
5:1950065..1982745
Genome browser
AA seq
1653 aa
AA seq
DB search
MASRKLSFLEFWRSKKEREELLERANQLKLLPSQLRQLHSDSGVRAALQNSRLASLLPPC
GRNVFRRFSPTSLREIQQPHEAEEKEPKKKKKKEVAEKDKPSGDLEAGKPLPFIYGDPPS
ELLNTPLEELDPHYQSQKTFIVIGKGNIIHRFSAESACYLLSPINPLRTVAIKILLHYLF
HFFILATILTNCVFMTLNEPPAWSQTVEYVFIAIYTLEVIVKLVSRGVCVRRFTFLRDPW
NWLDVMVIIPAYMEIFVSLGTFSLLSTIPRVLKIITVIPGLRTTVVALVQSLKRLAGVFV
LMVFWISIFAMIGLQIFMGSLRQKCMMKLTFNRSDETEMSNWDFQAYINDPINWYHRPYH
TDPLLCGNGSDAGVCPEGFYCQKGGRNPNYGYTNFDDFGWSVLSLLRVLTGDFWENLMLL
TLRTAGKIHLSSFLVIFFPGCFCLVSLFVAVVAMASVEPEKVRVTEAKRKEEEFHRILEA
LKKRERPEQAVSEIEDGENKSEEQKLIEVPEKDQRSCSPCLFGFTDRFLKWNCCGCCPRL
QAFVASPFFDLAIVICLIINTIFMAMEHYPMTMHFEEFLFTGTLVFTMIFTAEMAVKLVA
MGLRGYFQVRLPVSWQLECYLDPYLSPYLSVYLYPHLSHAQLRVVRLARWWWSFQMLLKL
MQISVRAVRNLTLLLLIMVFMFSVVGMELFGGDYRDNVCRISADCQLPRWHMYDFYHSFL
IIARVLCGEWIETLWDCMEVSNDAMCLIFFMIVVIVGDMLALHLFLTLLLSSFSYECVTA
PEPMEKNKDISRLHTAVASIKTWIVERVCPLQGKKKHVIPDHTGRKEYLALDLTSDQLAS
EHSTLSGDHGNLTGKYHKTESQRAPIADTEIEFKTPENEEKEKECDDVQKHPEVQQDKDD
EDPKRNTPEDCCSDKYCCCCPFQDIDTSRGVGRVWFNFRRTCLTIVRHPFFEAFMVVVIL
LSSVALVFEDIHLPNRRVLRVVLEKADQVFTFVFLMEMLLKWIGLGLRRYFTDAWCWFDF
LVLDVSLVFLAAGSIGFTGPSVLWSLRALMPLRAVSRFQGMRVVVHTLARTVPAMVSMLP
VFLIVSLIFGICGVNMLAGKFYYCFNETADESFLSGDVENKTECMILTMENFTEVTWRNN
RLNFDTVSQAYLSLLHVTVAYDWISVIYGAVDSVMVESQPIYEHHPSMYLFFICFLIVSS
FFTFNLFIRVIIDKLQRDKICFFYFEGKLIFMTEQQEKYFKALKKRLSKEPQKSAPRPQS
RCLAWVFDLVTRPCFEVVMVTVICLNMLVLMVETFDDSILKMEILYFFHFTFILIFFIEA
ILKITALRKHYFFDCLNVIDFVVIIAMTVALFIPDFIFMYFFSPNAIAVLRLGRIRRVLH
LIPFTKGIRKLLLAFMMSLPAAFNISLLLTLNVFALSFFGMFNFAFVKKEGMIDDTFNFE
TFVNSLINVIAGVFRLGLNTRETMLYCDPDQENPGTAVRGDCGSLVATVVFAAISVVVIF
LLTLHLFIAVLLETFSSEDAGPLSDGDLQMFYNTWRQFDPDASQFIQYSKLSDFCDALQD
PLRIPKPNTIRLVHMDLPLLPGDKIHYSDVLLALAAQVSADQDMDALRGRMEEKFTAKAS
NEPISSTLRRKQEEVAAAVIQRAYRRHRGAEEA
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcagaaaattgtcatttttggagttttggaggagcaagaaggagagagaggaa
ctcctggagagagccaatcagctgaaacttcttccatcacaactgagacagttgcacagc
gacagcggggttcgagcggcgctgcagaacagcaggttggcgtctcttctgcccccttgt
ggtagaaatgtctttaggcgcttctcaccgacctcgctgagggagatccaacaaccccat
gaagccgaggagaaggagccgaagaagaagaagaagaaggaggtagcggagaaagacaaa
ccgtccggtgacctggaggccgggaagcccctcccattcatctacggggacccgccctct
gagcttctcaacaccccattggaggagctggatccccactaccaatcacagaagacgttc
atcgtgatcggcaaaggaaacatcatccacaggtttagcgccgagtcggcctgttacctg
ctgagtccgatcaacccgctgaggaccgtcgccatcaagatcctccttcactatttattc
catttcttcatcctggcaacaatcctgaccaactgtgtgttcatgacgctgaatgaacct
ccagcgtggagccagactgtggaatacgtgttcatagccatctacacgttagaggtcatc
gtaaagctcgtgtcccggggcgtctgcgtcagaagattcaccttcctcagagacccctgg
aactggctggacgtcatggtcatcatcccggcatatatggaaatttttgtaagtttgggg
acattttctctgctgagtacaattcctcgagtactgaagatcatcacagtcatcccaggt
ctgaggacgactgtcgtagctctcgttcaatcactgaagaggctcgctggcgtcttcgtc
ctgatggttttctggatcagcatcttcgctatgattggcctgcagatcttcatgggaagt
ctgcgtcagaaatgtatgatgaaactgaccttcaaccgcagtgacgaaacagaaatgagc
aattgggatttccaagcgtacatcaacgacccaataaactggtaccaccggccttatcac
actgatcctctgctgtgtggaaacggctctgatgctggggtctgtccggaaggtttttac
tgtcagaaggggggaagaaacccaaactacggctacaccaacttcgacgacttcggctgg
tctgtgctgtctctgctcagagtgctgactggagacttctgggaaaacctgatgctgctg
acgttgcgaacagcaggtaaaatccacctgagctccttcctggtcatcttcttccccggc
tgtttctgcctcgtcagcctcttcgtggcggtggttgccatggcgtccgtggagccggag
aaggtcagggtcaccgaggccaaacggaaagaagaagagttccaccggatcctggaggcg
ctgaagaagagagagagaccggagcaggcagtctcagagatagaagatggtgaaaacaag
agcgaagagcaaaagctcatagaagtacctgagaaggaccagaggtcgtgctctccgtgt
ttgtttggcttcaccgaccgcttcctcaagtggaactgttgtggctgttgtccgcgactc
caagccttcgtcgcgagcccgttctttgacctggcgattgtcatctgcctcatcatcaac
accatcttcatggccatggagcattacccgatgacgatgcacttcgaggagtttctgttc
actggaactttggtcttcacaatgatcttcacagccgagatggccgttaagctcgtggcc
atgggcctgcgcgggtacttccaggtcagacttcctgtttcttggcagctagagtgctac
ctggacccttacctgtctccttacctgtctgtctacctgtatcctcacctgtctcatgcc
cagttgcgagtggttagactggccaggtggtggtggtccttccagatgttgctaaagctc
atgcagatttcggtgagagctgtgaggaacctgactctcctcctgctcatcatggtcttc
atgttctccgtggtcggcatggagctgttcggtggggactacagggacaacgtctgccgc
atctcagccgactgtcagcttcctcgttggcacatgtacgatttctaccactccttcctc
atcatcgccagggtcctttgtggggagtggatcgagaccctgtgggactgtatggaggtc
tccaatgacgccatgtgtctgatcttcttcatgatagtcgtcatcgtcggagatatgctg
gccctacatctgttcctgaccttgttgctgagctcgttcagctatgaatgtgtgacggct
ccagaaccaatggagaaaaacaaagatataagccggttgcacacggcggtggcctcaatc
aagacctggattgtggaacgtgtctgccctttgcagggaaagaagaagcatgtcatccca
gaccacacaggtaggaaggagtacctggccttggacttgacttctgaccagctggcgtca
gagcacagcaccctcagcggcgaccatggcaacctgactggcaaataccataagactgag
tcccagagggcccccattgctgacaccgagatcgaattcaagacgcctgaaaatgaagaa
aaagagaaagaatgcgatgacgtgcagaaacaccctgaagttcagcaggacaaagacgac
gaagatcctaaacgaaacacacctgaggactgctgcagcgacaagtattgctgctgctgt
ccgttccaggacatagacacgtcccggggcgtggggagggtctggtttaacttcaggaga
acctgtctcaccattgtacgccacccgttctttgaagccttcatggtcgtcgtcatcttg
ctgagcagcgtggctctggtgtttgaggacatacacctgccgaacaggagggtcctcagg
gtggttttggagaaggcggaccaggtgttcaccttcgtgttcctgatggagatgcttctc
aagtggatcggactcggactcaggagatacttcaccgacgcctggtgctggttcgacttc
ctcgtcttagacgtgtctctggtgtttctggcggccggcagcattggattcactggcccg
tctgtcctctggtctctgagggctctgatgcccctgagggccgtgtctcgcttccagggc
atgagggtggtggtgcacactctggcccggaccgtcccggccatggttagcatgctgccg
gtgtttctgatcgtctcgctgatcttcggcatctgtggcgttaatatgttggcgggaaag
ttttattactgtttcaacgagacggcagacgaaagtttcctatccggcgacgtggaaaac
aagaccgagtgtatgattctgactatggaaaacttcaccgaggtcacctggcggaacaac
aggttaaactttgacaccgtgtctcaagcttacctgtcgctgctgcacgtgaccgtagca
tacgactggatatccgtcatttatggagccgtggactctgtaatggtggagtctcagccg
atctatgagcaccacccgtccatgtacctgttcttcatctgtttcttgatcgtcagctcc
ttcttcaccttcaacctcttcatcagagtcatcatcgacaagctgcagagagacaagata
tgtttcttttactttgaagggaaacttattttcatgacagagcagcaggagaaatatttc
aaggctctgaagaaacgtttgtccaaggaacctcagaaatctgctcccagacctcagagt
cggtgcctggcttgggtctttgacctggtgaccagaccgtgtttcgaagtcgtcatggtg
acggtgatctgcctgaacatgctggtcctgatggtggagacgttcgatgatagcatcctg
aaaatggagatcctgtactttttccacttcaccttcatcctcatcttcttcatagaggcc
attctgaagatcaccgcgctcagaaagcactacttcttcgactgcttgaacgtcatcgac
ttcgtcgtgatcattgcgatgacggttgctctcttcatccccgacttcatattcatgtac
tttttctcgcccaatgccatcgccgtgctccgattgggtcgcatccgtcgcgtcctccat
ttgatccccttcaccaagggcatcaggaagctgcttttggccttcatgatgtcacttcct
gccgccttcaacatcagcctgctcctcaccctcaacgtgttcgctctctccttcttcggc
atgtttaactttgcctttgtgaagaaggagggcatgatcgacgacacgtttaacttcgag
acttttgtgaacagcctgatcaacgtgatcgccggcgtgttcaggttggggctgaacaca
cgggagaccatgctgtactgcgaccctgaccaggagaacccggggacggcggtccgaggg
gactgcggcagtctggtggctaccgtcgtctttgccgccatctcagtcgtcgtcatcttc
ctgctgacgctccacctcttcatcgccgtcctcctggagaccttcagctccgaggacgcc
gggccgctgagtgacggagaccttcagatgttctacaacacctggaggcagtttgacccc
gacgcctcgcaattcatacagtacagtaagctgtcagacttctgcgacgcgctgcaggat
cctctgaggatccccaaaccaaacaccatcagactggtccacatggatctgcctctgctg
ccaggagacaagatccactactcagacgtcctcctggctctcgccgcacaggtgtcagct
gatcaagacatggacgctctcagagggaggatggaggaaaagttcacggccaaggcgtct
aacgagccaatcagcagcaccctgcggcggaaacaggaggaggtggcggcggcggtgatc
cagagggcgtacaggcggcacaggggtgccgaggaggcctga
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