Pempheris klunzingeri: 139213551
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Entry
139213551 CDS
T11454
Symbol
smg6
Name
(RefSeq) telomerase-binding protein EST1A isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
pklu Pempheris klunzingeri
Pathway
pklu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139213551 (smg6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pklu03019
]
139213551 (smg6)
03032 DNA replication proteins [BR:
pklu03032
]
139213551 (smg6)
Messenger RNA biogenesis [BR:
pklu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
139213551 (smg6)
mRNA cycle factors
Common to processing body (P body) and stress granule
139213551 (smg6)
DNA replication proteins [BR:
pklu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
139213551 (smg6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139213551
NCBI-ProteinID:
XP_070700379
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Position
14:14405248..14613779
Genome browser
AA seq
1659 aa
AA seq
DB search
MANELDRVRISAAELRAEASNSINNTDCLKEEQQEHHVHKQQRKREAKRPDQQRYLPAAG
QGRRYRDKEEGETGQSEPLCVDSYEHDQPSQSEKTGHTGKSVERHGCTDTGMGINKREED
RMRGDGSNTQNCRKGSQPQAKPEANQVKVFVESDREHQEPAGVTKQTKKARKPDREFYQP
GSRRSIQGKDCGVVREQDKPSPRKHEQKTEPEPQMCTEEREGNKKASIQKQGGKDNEVKG
VQENVKLSKSSETKRKQRRQDAEKPPLPSDASVEKITSKVEKLCVQDKGNVGCEGQDADE
LKCTRGETTDMERKGQAGGTKEDEEKIEKKREKGNRRRRGGEKDKERNQDSKKGDAEVGG
GGKSDRRATEADRNNKPGKTGETHQSKSRENRRESRRGDNNNNNRSRDADKDAKSQRNVE
RGDLNKSNANITTPTSKRYSKSDIRRSRNRTYSSSSASSVTSLDGPGRGMEIESTKWPRL
EPRHNNKEGVTKSGEGRRTHLPSWTTNGESSSEGSEMSDIAEDRRRRRRGGEEELSTERS
RDERNRPKGNKGGGRGILRVSLDKQSATSSHSGAAQQRKQGVVPRGRGGGILVLPARTDI
SNSPEVGQRLLFGGIRGGAASRSRGGRGGGVRRLWDPNNPDQKPALTSTQSSQHSSLQQP
VYLQTGTGYGQLHFLDTDDEVAGSPPVPQGEHFRSKQAAAMAYYKFQNSDNPYCYPMPTS
NPHNPGTATSQRYPYPYHMGPYQMAPTNGMYPGPGVGQICGTYRGAGYSQPGAGGGLTFE
EVEQHARGELGRLLRAADTQELQLSNLLSRDRVSADGLDRMAQFRADLLGLYEQVILTDI
EFSDSQNVDQALWKNVFYQVIERFRQLLKDHTCDNTPHIRNMLLTLLDEGALFFDALLQK
LQTVYQFKLEDYMDGMAIRARPLRKTVKYALISAQRCMICQGDIARYREQASDSANYGKA
RSWYLKAQQIAPKNGRPYNQLALLAVYTKRKLDAVYYYMRSLAASNPILTAKESLMSLFE
EAKRKAEQLERRRRQEHEGGSRGPAVRGRARGEDGARVEIWIRPSGQAATPSSQRGGSES
SRDSEQDGELGSLSASDLNKRFILSFLHAHGKLFTKVGMESFPGVASRVLQEFRTLLQHG
PSLLGSTHMLQIITINMFTIHNAHSRGEEGEVRSVLQEQSTALGLAMFALLVQRCTELLR
HTPADPVPMADGQEEGKGEQLEGMVRVSVFPLDLRELLPSIKVWSDWMLGHPDLWNPPPC
SIVDCRPDVWQCLADLCNVLARVDHEEVPLYKVDTDESEGDEELTVLQLKEDRLLAGFVP
LLAAPQEPCYTDRHTDMAIAADCKRVTVLKYFLEALCGQEEPLLAFKGGKYISVATSPPP
NHSADTRSRQDSLTEKEADDVIVEAESSISASEGEEDADEVGDSENDIRQLKARRHALAN
KLAQQQKRRDKIQAVLQTRGQLELEVRPLFLVPDTNGFIDHLGGLKKLLQCGTYIIVVPL
IVITELDGLAKGQDNFGGGVGSGGRSTGSRGSHNVNAAHVRAVQEKARLAVAFLEKGFEA
KEPCLRALTSRGSELESIAFRSEDTSGQQGNNDDVILSSCLHYCKDKAKDLMPDQRNGTV
KLQREVVLLTDDRNLRVKALTRNVPVRDIPAFLSWAKVG
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaactggaccgagtgcgaatctcagctgcggaactccgagctgaagcgtcg
aattcaatcaacaatactgactgtctgaaggaggagcaacaggagcatcacgtacacaag
cagcaaaggaagcgtgaagcaaaacgtcctgatcaacagcgttacctgccagcagctggg
cagggacggcgttaccgtgacaaagaggagggagaaactggtcaaagtgaacccctatgt
gttgattcatatgagcatgatcaaccgtcacagagcgagaaaacaggtcacacaggaaaa
agtgtagagagacatggatgcacagacactgggatgggtatcaacaaaagggaagaagac
aggatgagaggtgatggtagtaatactcagaactgtagaaagggcagccagccacaggct
aaaccagaggcaaatcaagtaaaagtctttgttgaaagtgacagagaacaccaggaacct
gctggagttactaaacaaacaaagaaagctcggaaaccagaccgagaattttatcaacct
ggcagccgcaggagcattcagggaaaggactgtggagttgtaagagagcaggataagcct
tcccctaggaagcatgagcagaaaactgagccagaaccccagatgtgtacagaggaaagg
gagggcaacaaaaaggcatctatacagaagcagggagggaaagataatgaagtaaagggc
gtacaggaaaacgtaaaactgtctaaatccagtgagaccaagagaaagcaaagacgccaa
gatgcagaaaaacctccattaccctctgatgcttcagtggagaaaattaccagcaaagta
gaaaagctctgtgtgcaagataagggtaatgtgggatgtgaaggccaagatgctgacgag
ttaaaatgcacgagaggggagacaacagatatggaaaggaaaggccaagcggggggaaca
aaagaggatgaagaaaagatagaaaagaagagggaaaaggggaaccgcaggagaagagga
ggggagaaggataaagagaggaatcaggattccaaaaagggagatgctgaagttggtggt
ggaggaaagagcgacaggagagcaacagaagcagataggaataacaaacctggtaagaca
ggagagacacaccaaagcaaaagcagagagaatcgcagagaaagcagaagaggtgacaac
aacaacaacaaccggtccagagatgctgacaaagacgccaagtcacaaagaaatgtagaa
agaggtgatctaaacaaatccaatgcaaacatcacaacaccaacctcaaaacgctattcc
aaatcagatattcggcgttcacggaatcgaacttacagcagtagctcagccagcagtgtg
accagcctggatggtcctggacgaggaatggaaatagagagtaccaagtggccacgcctg
gagcctcggcacaataacaaagagggggtgactaaaagtggggaaggacggaggactcat
ttaccaagctggacaaccaacggggaatcatcttcagaagggagtgagatgagcgacata
gcagaagatagaaggaggagaagaagaggtggggaggaagagctaagtacagagaggtcg
agggatgaaaggaacagaccaaagggaaacaaaggtggaggtcggggaatcctaagagtt
tctctagataaacagtcggctacctcgtcacatagtggggcggcacaacaacgcaagcaa
ggcgtggttcctcgtggtagaggtgggggtatcctggtgcttccagcccgcacagacatc
tctaattcacctgaggttgggcaaaggcttcttttcggtggaattaggggaggagccgct
tccaggagtaggggaggcagaggagggggagtgagacgactctgggatccaaacaaccct
gaccagaaacctgctctcaccagcacccaatcctcacagcattcatctctccagcagccc
gtatatcttcagacagggactggatatggacagcttcacttcctggacacagacgatgag
gtagcaggcagtcctccggtcccacagggtgagcactttcgatccaagcaggctgctgcc
atggcctactacaaattccaaaattctgacaacccctactgctaccccatgcccaccagc
aacccacataaccccggcactgccaccagccagcgctatccatatccttaccatatgggg
ccctaccaaatggctcccactaacggtatgtacccgggccctggtgtgggtcagatctgt
gggacttacagaggagccggttattcccagccaggtgcaggaggtgggctgacctttgaa
gaggtggagcaacacgccaggggggagctggggaggctgctgagggctgcagacactcag
gagctccagctcagtaacctgctatccagggacagagtgagtgcagatggactggatcgc
atggctcagttcagagctgacctattgggcctatatgagcaggtcatcctgacagacatc
gagttctcagactctcagaacgtggatcaggctttgtggaaaaacgtgttttaccaggtc
atagagcgttttcggcagctgctcaaagaccacacatgtgacaacacccctcatatcagg
aacatgctgctcacgctgctcgatgagggagcactattctttgatgcgctgcttcagaag
ttacaaacggtgtaccagtttaagttagaagattacatggatggcatggctatcagggct
cggccactacgcaaaacggtaaagtatgcacttatcagtgctcagcgctgcatgatttgt
cagggagacatagcgcgctaccgggagcaagccagcgactctgccaactacggcaaggct
cgcagttggtacctgaaagcccagcagatcgcccccaaaaatggccgaccatataaccag
ctggcgctgctggcagtctatacaaagcggaagttggatgctgtgtattattacatgcgc
agcttggcagcttccaaccccatcttgactgcaaaggaaagcctgatgagtctgtttgag
gaagctaagcgtaaggctgagcagcttgagcgaaggaggaggcaggagcatgaaggaggc
tccaggggtccagcagttagaggaagagcaagaggagaagatggagcacgtgtggagatt
tggattcgccccagcggacaagccgcaaccccatcctcacagagaggaggcagcgaatcc
agcagagactctgaacaggatggagagctgggcagtctcagcgctagtgatctaaataag
agattcattctgagtttcctgcatgcacatggaaagctcttcactaaagtgggcatggag
tccttcccgggagtggcgagccgtgttctgcaggagtttaggacgctgcttcagcatggc
ccctccctattgggcagcacacacatgctgcagatcatcaccattaacatgtttactata
cacaatgcccacagcagaggtgaagaaggagaggtgcggtctgttttacaagagcaaagc
actgccctgggtctcgccatgtttgcactcctggtgcagcgctgcacagagctgctcaga
catactcctgcagatccagtccccatggcagatggacaggaagagggtaaaggggagcag
ctggagggtatggtgagggtctctgttttcccactggaccttagagaactactgccaagc
atcaaggtctggtctgactggatgttgggacacccagacctgtggaaccccccaccttgc
agtatagtagattgccgccctgatgtgtggcagtgcctggctgacctgtgtaacgtgctg
gcacgtgtggaccacgaggaagtaccactgtacaaagtcgacaccgatgaaagcgaggga
gatgaggagttgactgtgctgcagttgaaggaggacaggctacttgctggctttgtacca
ctgctggctgcaccacaggagccctgttacacagacagacacaccgacatggcaatagca
gcagattgtaagagagtcacagtgctgaagtactttctggaggctttatgtggacaggaa
gagcctctgttggccttcaagggaggcaaatacatctctgtggcaacttctcctccacct
aaccactcagcggatacaaggagcaggcaggattctttaacagagaaagaggctgatgat
gtcatagtggaggcagagtcctccatctctgcatcggaaggagaggaggacgccgacgag
gtgggagatagtgagaatgacatcagacagttgaaggcgcgacgccacgcccttgccaac
aaactggcacagcaacagaagcgcagggataaaatacaggcggtgctgcagacacgcggg
cagctggagctggaagtgaggcctctctttttagtcccagatacaaatggcttcattgat
cacttgggagggctgaagaaactccttcaatgtggaacatacataatagttgtgccactc
atcgttattaccgagttagatggcttagctaaaggccaggacaactttggtggaggagtg
ggctcaggaggacgcagcactggcagtcgcggcagccataatgttaatgcggcccacgtg
cgggccgtgcaggagaaggcccggctggcagtggcttttcttgagaaaggattcgaagcc
aaggagccgtgcctcagagccctgacgagcagaggcagtgagcttgagtctattgccttc
cgcagtgaagacacttctggacaacagggcaacaatgatgatgtgattctgtcctcctgt
ctccactactgcaaagacaaggcaaaagacctcatgcctgatcagagaaatgggacggtg
aagctccagagggaggtggttctccttacagacgaccgtaacctgcgtgtcaaagctttg
acccgcaacgtcccagttcgagacatccccgctttcctcagctgggccaaagtaggctga
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integrated database retrieval system
