Pempheris klunzingeri: 139216664
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Entry
139216664 CDS
T11454
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pklu Pempheris klunzingeri
Pathway
pklu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139216664 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pklu03041
]
139216664 (eftud2)
Spliceosome [BR:
pklu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
139216664 (eftud2)
Complex C
U5 SnRNP specific factors
139216664 (eftud2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Roc
Ras
Motif
Other DBs
NCBI-GeneID:
139216664
NCBI-ProteinID:
XP_070703955
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All DBs
Position
17:complement(21927056..21939424)
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AA seq
971 aa
AA seq
DB search
MEADLYDEFGNYIGPELDSDDDEDDLDAEDRDVDEGDEDDDDEPADADDDVPGMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVRNKQFTLMEQELPATVYDMEFLAD
LMDGPELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDVDLRYTDILFTEQERGVGI
KSTPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSSIRISDGIVLFIDAAEGVMLNTER
LIKHAVQERMAITICINKVDRLIVELKLPPTDAYYKLRHIVDEVNGLLSTYSTDENLVVS
PLLGNVCFASSQYSICFTLGSFAKIYSDTYGDINYNEFAKRLWGDIYFNPKTRKFTKKAP
SSNSQRSFVEFVLEPLYKILSQVVGDVDTSLPRVLDELGIHLTKEELKLNIRPLLRLVCN
RFFGEFTGFVDMCVHHIPSPQEGARTKIEHSYAGGLDSDLGEAMAECDPDGPLMCHTTKM
YSTEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLEDEEDSQVCTVGRLWISVARYQIEV
NRVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
EPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgatctgtatgatgagtttggaaactacatcggtccagagctggactctgat
gatgatgaagatgatctggatgcggaggacagagatgttgacgagggtgatgaagatgat
gacgatgagcctgctgatgctgacgacgatgtcccgggcatggaggtggtcctgcacgag
gacaagaagtactaccctacggcagaggaggtttatgggcctgaagtggagactattgtc
caagaggaagacacacaaccgctcacagagcccatcatcaagcctgtgaggaacaagcag
ttcaccctgatggagcaggagctacctgccactgtttatgacatggaattccttgctgac
ctcatggacggtcctgagctgatccgtaacgtcaccctgtgtggtcaccttcaccacggc
aagacctgttttgtcgactgcctgatcgaacagacacacccagaaatcaggaagagagat
gatgtggatctccgctacacagacatcctcttcacagagcaggagagaggagttggcatc
aagagcaccccggtcactatggtcctcccagactccagaggaaaatcctaccttttcaac
atcatggatacaccaggccacgtgaacttctctgacgaggtcacgtcgagcatccggatc
tcagacggcattgtcctcttcatagacgcagcagaaggagtgatgctgaacacggagcgt
ctgatcaaacacgccgtgcaggagcgtatggccatcaccatctgcatcaacaaggtggac
cggctcatcgtggagctcaaactgcctccaacagatgcttattacaaacttcgccacatt
gtggatgaggtcaacggtttgctcagcacatactccacagatgagaacttggtcgtgtct
cctctccttggaaacgtgtgcttcgctagttctcagtacagcatctgcttcaccctgggg
tcgtttgcaaagatctattctgacacttacggtgacatcaactataatgagtttgccaag
aggctttggggagacatttatttcaaccccaaaacccgcaagttcacaaagaaagccccc
agcagtaattctcagcgcagctttgtggaatttgtcctggagcctctctacaagatcctg
tcccaggtggtcggggatgtggacacgtctctcccccgagttctggatgagctggggatc
cacctgaccaaagaggaactgaagctgaacatcagacccctgctgaggctcgtctgtaac
cgcttctttggagagttcactggcttcgtggacatgtgtgtacatcacatcccctcccca
caagagggagctaggaccaagatagagcactcgtacgcgggaggtctggactcagacctg
ggggaggccatggcagagtgcgaccctgatggtcctttgatgtgccacaccactaagatg
tacagcacagaggacggggttcagttccatgcgttcggcagggtgctgagcgggaccatt
caggcgggccagcccgtcaaggttttaggggagaactacaccctcgaagatgaggaggac
tcccaggtctgcaccgtgggccgcctctggatttcagttgccagataccagattgaggtg
aaccgagtgcctgcaggtaactgggttctcatcgaaggttgtgaccagccaatcgtgaag
acggccacgatcacagagcccagagggaacgaagaggctcagatctttaggccgctgaag
ttcaacacggcctcagttataaagatcgctgtggagcccgtcaacccatcagagctgccc
aaaatgttggacggactgcggaaggtcaacaagagctatccgtctctcaccactaaggtg
gaggagtctggagaacatgttatcttggggacaggagaactctacctggactgtgtcatg
cacgacctccgcaagatgtactctgagatcgacattaaagtcgccgaccctgtggtgacc
ttctgtgaaacggtcgtggagacgtcgtcactcaagtgcttcgctgagacgcccaacaaa
aagaataagatcaccatgattgcagagcccttggagaagggactggctgaggacatagag
aacgaagtggtgcagatcacgtggaacaggaagaagctgggagagtttttccagacaaag
tacgactgggatctgctggctgccaggtctatctgggccttcggaccggacacgacggga
ccaaacatcctcgtagacgacacgcttccctctgaggtggacaaggcgctgctgggctcg
gtcaaagacagcatcgttcagggcttccagtggggcaccagggaggggcccctgtgtgac
gagcccatcaggaatgtcaagtttaagatcctggacgccgtcattgctcaggagcccctc
cacagagggggggggcaggtcattcctactgccaggagagtggtgtactccgccttcctc
atggccactccgaggctgatggagccttactacttcgtggaggttcaggctccagccgat
tgtgtgtctgctgtttacacagtgctggctcgaaggaggggtcacgtcacccaggatgcc
cccattccaggatctcctctctacaccatcaaggcgttcatcccggccatcgactccttc
ggctttgagacagacctgcgcactcacacacagggacaggccttcgctctgtctgtgttc
caccactggcagatcgttcccggtgaccctctggacaagagcattgtgatcaggcctctt
gagccccagcctgccccccacctggccagagagttcatgatcaagacccgaaggcgcaag
ggcctgagcgaggatgtgagcatcagcaagttcttcgacgatcccatgttgttggagctg
gccaagcaggacgtggtgctgaactaccccatgtga
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