Pempheris klunzingeri: 139216811
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Entry
139216811 CDS
T11454
Symbol
smcr8a
Name
(RefSeq) guanine nucleotide exchange protein smcr8a
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
pklu Pempheris klunzingeri
Pathway
pklu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139216811 (smcr8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pklu04131
]
139216811 (smcr8a)
Membrane trafficking [BR:
pklu04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
139216811 (smcr8a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
Motif
Other DBs
NCBI-GeneID:
139216811
NCBI-ProteinID:
XP_070704147
LinkDB
All DBs
Position
17:11206036..11210645
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AA seq
951 aa
AA seq
DB search
MIGSPDVVAFTKEEEYGQTHPDPLALPEEFSVPLHPLADSNPWAKTSYAKFTKDFILISE
FSEQVGPQPLLTIPDDPKVCGTFDLNYFSLRIMSVDYQASFVGHPPGSGYPRLSFVEDSR
VVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYVSADERKIMLQFQELSLRFSQASEC
LKAGNRRAFAKELQRKLRDLEYTHSVLQKEEGLQREAGRQCMYSAHAVEKANELANVEKS
IYEHRDLLRQISSYHLRPRRDPHAVTCQKCITECLSECEQLLEKYAKLAKPFSYTDKLEK
GEEGQGQINDGGGEEEDEEEDEGVKRRPSYTPQLIKAKSAKCFDKRLKTLQELCDNTFYE
ATVALLKETERSFRGDLCYLHTRRLDRMLRRKQRVTNFLFEEDLVDGDEDEEETLKPFCA
VNHAVDNYTLHLNPPPIVLGPEPLELDPLDPPDSLDPASETSHTQESELGLVGTHLESSP
SDQTLETQESSDGTKGSFSSDKSGMGQAERQQNLASMTSEGADPDSDLTPDPDHNTDLER
ESSSEDMETTAGEDEGDNEGEQTPVSLLEVVSELEASREDECVGVTDGACEIESDLLVPI
DTACCMSQEGFLYEASAPELVPHLSQSSHTQPCQTSVVNQEPQALLPLQDDYAVGTPCSE
SPAAGLELPVGLLGDAVPRTSAEDGSDCTMSASTGSDRATSPLGYGGVVTLRQRKKAGQG
ALRFVRQYPFAMQALWCLLSGRTLVVLGADEGRVRRLVAALALFVPGPGKCGEKVQAWLS
CPFTLTDLQRWKLIGLQRVASPVGSSMLYSLSRYSRYISILDADQKTLRCPSYSGQLLAN
IADHRTYIRRGSTYFLHLQSTLCRLAAKAFLFTFTHHLHLPVSSTEGPEVVEGRRRCFLQ
EQLGLGEEDSQILLYLSQLITQHYLQPVGGSGAAAATCFSFNYTTSVLYKI
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgataggctcacctgacgtggtggctttcactaaagaggaagagtatgggcagacacat
cctgatcccttggctctccccgaggagttctctgttcccctccatcccctggctgactcc
aacccctgggccaagacctcctacgccaagttcaccaaagacttcatcctcatctctgag
ttctctgagcaggtgggcccccagcctctcctcaccatcccagatgaccccaaagtctgt
ggcaccttcgatctcaactacttctcccttcgcatcatgtcagtggactaccaggcctcc
ttcgtggggcacccgcctggcagtggctacccaaggctcagctttgtggaggactcgagg
gtggtgctgggcgactcaaaggagggggcgttcgcctacgtccatcaccttacgctttac
gacctggaggcgaggggctttgtgcgaccattctgcatggcgtatgtttcagcagatgag
aggaaaatcatgctgcagtttcaggagctgtccctccgcttctcacaggcctctgagtgt
ctgaaggctgggaacaggagagcttttgccaaggaactccagaggaaacttcgggacctc
gagtacactcactctgtgctgcagaaggaggagggcctgcagagagaggcggggcgtcag
tgcatgtactctgctcatgctgtggagaaggccaacgagctggcaaacgtggaaaagagc
atctacgaacacagagacctgctgagacagatcagctcctaccatctacgtccacgccga
gatcctcatgcagtcacctgccagaaatgtataactgagtgcttgagtgagtgtgagcag
ctgttagagaaatacgccaagcttgccaaacctttcagttacactgacaaactggagaaa
ggggaggaagggcagggtcagattaatgatggagggggtgaagaagaggacgaggaggag
gatgagggcgttaaacgcaggccgtcctacacgccgcagctgatcaaagctaagtctgca
aaatgtttcgacaagcgcctgaagaccctgcaagagctgtgcgacaacactttctacgag
gccactgtcgcgctcctgaaggagacagagaggagtttccggggggacctgtgttacctg
cacacacgccgcttggacaggatgctacgcaggaaacagagggttaccaacttcctgttt
gaggaggacctcgttgatggtgatgaggatgaggaggaaacactgaaaccattctgtgct
gtgaaccatgctgtagataactatacactccacttaaatccacctcctattgtgctcgga
ccagaacctctagagctagatcctctggaccctccagattctctagacccagcctctgag
accagccatacccaagagagtgagcttgggcttgtggggacccatctggagtcctccccc
tcagaccagactctggagacccaggagagctcggatgggaccaaaggaagctttagcagc
gataagagtgggatgggtcaggcagagaggcaacagaatctagcgagtatgacgtcagaa
ggtgcggatcctgattctgacctgacccctgaccctgaccataacactgacctggagagg
gagagcagcagtgaagacatggagaccactgcgggggaggatgagggtgacaacgaggga
gagcagacgcctgtgtctttgctggaagtggtgtctgagctggaggccagcagggaggat
gagtgtgtgggagtaaccgatggggcttgtgagatagagtctgacttgttggttcccata
gacacagcatgctgtatgtcccaagagggcttcctttatgaggcttctgccccggaattg
gtgcctcatctcagccaaagctcccatacacagccctgtcaaacctccgtggtcaaccag
gagccccaggccctacttccactccaggacgattacgctgtaggtactccttgctcagaa
agccccgcagccgggctggagctgcccgtggggctgcttggagatgcagttccacgcaca
tcagcggaggatgggtcagactgcaccatgagtgcttctacaggttctgatcgggctacc
tcacctcttggctacgggggggtggtgaccctacgtcaaaggaagaaggctggacaagga
gccctaaggtttgtccgacagtacccctttgccatgcaagctctatggtgcctgctgagc
ggcagaaccctggtggtgcttggggcagatgaggggagagtccgcagactggtcgctgct
ctggccctctttgtgcctggtcctgggaaatgtggggagaaggttcaagcctggctgtcc
tgtcccttcacactcactgacctgcagaggtggaaactcattggattgcaaagagtagca
tcacctgtgggttccagcatgctttactcgctgtcacgctacagtcgctacatctccatc
ctggatgccgaccagaagaccttgcgctgtccgtcctatagtggccaactccttgccaac
atagccgaccaccgcacctacatccgccgcggttccacctacttccttcacttgcagagc
acgctctgtcgcctggcagccaaggccttcctgtttaccttcacccaccacctccacctg
ccggtaagctccacagaagggcccgaagtcgtggagggccggcgccgctgcttcctgcag
gagcagctggggctgggcgaggaggacagccagatactgctctacctcagccagctcatc
actcagcattacctacagcccgtcggcgggagtggtgctgcggcagcaacttgttttagt
tttaactacaccaccagcgttttatacaaaatctaa
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