Pempheris klunzingeri: 139223730
Help
Entry
139223730 CDS
T11454
Symbol
lig4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pklu Pempheris klunzingeri
Pathway
pklu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
139223730 (lig4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pklu03400
]
139223730 (lig4)
Enzymes [BR:
pklu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
139223730 (lig4)
DNA repair and recombination proteins [BR:
pklu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
139223730 (lig4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139223730
NCBI-ProteinID:
XP_070711816
LinkDB
All DBs
Position
24:8613289..8618700
Genome browser
AA seq
910 aa
AA seq
DB search
MEGTSKSGTEGQPSVAAQVPFLHLCTTLEKIQKSKLRPDKSKILHDFIESWRKFHSALHK
DNPRTTDSFYPAIRLIVPAFERERMAYGIKENMLAKLYIDVLGLPKNGPEANKLLNYRAP
TTSQGEAGDFAGMAYFVLKKRCTSQGTLSIKEVNDFLDSVAMNNASKQKDLVKKSLLHLI
TQSSALEQKWLIRMILKDMKLGISKEIVLQVFHPDAADFYNVNTDLNKVCQQLHNPSVSL
SEVSIGLFSAFKPMLAAVANIRNVEKQMGNSPFYIQTKLDGERIQLHKDGDVYKYFSRNA
FEYTQQFGGSPLEGSLTPHIHNVFKSHVVNCILDGEMMAFSPTTETFMQKGSKFDIKRLV
DDSELQTCFCVFDVLLVNDQKLGKETLKKRYETLQTVFNPVKGRIHLVPKTDGRTMQEVV
NALNDAIDNREEGIMVKDPSSIYKPDKRGEGWLKIKPEYMDGLMDELDLLIVGGYWGKGR
RGGMMSHFLCAVAEAPKPGEKPSVFHTLCRIGSGYTMKELYDLGLKLAKHWKVYRKNDPP
ASILCGTERPEVYIEPCNSVIIQVKAAEIVGSDMYKTNCTLRFPRIEKIRDDKEWHQCMT
LAELDEFRSKASGKLASRHLRIDDDEPQKKKRKLPAKPKKVVGIIDHFKPQDLSGVTKET
DMFEDVEFCILNGTEDHPKAELEKGVARCGGIVVQNPGRDTYCVIAGVENMRVKNLISSN
QHDVVWAAWLLDCLSQKEVIPWQPRHMIHMSPATKEHFAKEYDSYGDSYFVETDERQLQE
VFGRIGSADASAAVDVGQVEQRYGWEDLPTSMFRPFRVYMDSYADIGDPKTAIPATCLDI
RALEFRYHGGTVVQKLKEGVSHVIIAEETRLLDLRTLRRCFRRKFKIVSDSWVTDSIEAG
YLMNDTDYLV
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggagggaacttccaaaagcggcactgaaggtcagccctctgttgcagctcaggttcct
tttctccacctgtgtaccactttagaaaaaatccagaagtctaaactccgcccagataaa
tccaagatccttcatgatttcatagagtcatggaggaagtttcactctgccctccacaaa
gacaacccccgaaccacagattctttctacccagcgatacgcctcatagtccccgccttt
gaacgagagcgcatggcgtatggcatcaaagagaacatgctagctaaactctacatcgat
gtattaggcctcccaaagaatggcccagaagccaacaaactgctgaactaccgtgctccc
actacgtcccaaggagaagctggagactttgccggaatggcgtactttgtgctgaagaaa
cgttgcaccagccagggaaccctcagcatcaaagaggtcaatgactttctggactcagtg
gccatgaacaatgccagcaagcagaaggatcttgtgaaaaagagtctgcttcacctcatc
actcagagctcagctctcgagcaaaaatggctcattagaatgatcctgaaggacatgaag
ctcgggatcagcaaagaaatcgtcctccaagtcttccacccggatgctgctgacttctac
aatgtcaacactgacttaaacaaggtgtgccagcagctccacaatccctctgtttcttta
agtgaggtctctattggactcttctctgctttcaagcctatgttggcagctgtggcgaac
atccgcaatgtggagaaacagatgggaaacagccctttctacattcagaccaagctggat
ggggagcgtatacaactgcacaaagacggggatgtgtacaagtactttagccgaaatgct
tttgaatacacccagcagtttggaggatccccactcgagggctcactgacacctcacatc
cacaacgtttttaaaagccacgttgtaaactgcatcctcgatggcgagatgatggcgttc
agcccgaccacagagaccttcatgcagaaagggagcaaattcgacatcaagagactcgtg
gacgactctgagctacagacgtgcttctgcgtgtttgatgtgctgttagtcaatgaccag
aaactcggcaaggaaacactgaagaagcgctatgagacccttcagacagttttcaaccca
gtcaaaggaaggatacacctggtgccaaagactgatggccgaaccatgcaggaggtggtg
aacgcactcaacgacgccattgacaacagagaagaggggatcatggtgaaggatccttca
tccatctacaaacctgacaagcgaggggagggatggctaaaaataaagccagaatatatg
gatggcttgatggatgagctcgacctgctgattgtcggtggctactgggggaaagggaga
cgggggggcatgatgtcccatttcttatgcgccgttgctgaagctccaaagcctggcgag
aaaccctcggttttccacactctctgccgcatcggctctggctacaccatgaaggagctg
tatgaccttggtttaaagctagccaagcactggaaagtctatcgaaaaaatgacccacca
gcatccatcttatgtggaacagagagaccagaagtttacatcgaaccctgcaactcagtc
atcatccaggtcaaggcggctgaaatagtcggaagcgacatgtataaaaccaactgcacc
ctgcgcttccccaggatcgagaagatccgtgatgacaaggagtggcaccagtgcatgact
ctggcagagctggatgagtttcgcagcaaggcgtctggaaaactcgcctcccggcacctt
cgcatcgatgacgacgaaccacagaagaagaagcgcaagctgccggccaaacccaagaag
gtggtcgggatcatcgaccacttcaagccgcaggacctctccggggttaccaaggagacg
gatatgtttgaggatgtggagttctgcatcctgaatggcacagaggaccaccccaaggct
gaactggaaaagggcgtggccaggtgcggagggattgtggttcaaaacccagggcgagac
acctactgcgtcattgccggtgtggagaacatgcgcgtgaagaacctgatttcgtccaac
cagcatgacgtggtgtgggcggcctggctcctggattgcctgagccagaaggaagtgatc
ccatggcaaccacgtcacatgatccacatgtcgcccgctaccaaggagcactttgcaaag
gagtacgacagctacggcgacagctactttgtggagacagatgagcggcagctgcaggag
gtttttggccggattggcagcgcagacgcgtctgcggccgtggacgtcggccaggtggag
cagcgttacggctgggaggaccttcccaccagcatgttcagacctttcagggtctacatg
gacagctacgctgacatcggagacccgaaaaccgccatacctgccacctgtttggacatc
agggcgctggagttccgctaccacggagggacggtggtgcagaagttgaaggaaggagtc
tctcatgtcattatcgcagaggaaacgagactcctagacttaaggactctgaggcgctgc
tttaggagaaagtttaagattgtaagcgactcatgggtcactgattcaatcgaagcaggg
tatctgatgaacgacactgactacttagtctga
DBGET
integrated database retrieval system
