Plasmodium knowlesi: PKNH_0420600
Help
Entry
PKNH_0420600 CDS
T01094
Name
(RefSeq) CCR4-associated factor 16, putative
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PKNH_0420600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkn03019
]
PKNH_0420600
Messenger RNA biogenesis [BR:
pkn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PKNH_0420600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
NACHT
SMC_N
AAA_23
AAA_15
RsgA_GTPase
AAA_29
AAA_22
Dynamin_N
Arf
Sigma54_activat
ElaD_SseL-like_N
Septin
nSTAND3
Hyaluronidase_1
MMR_HSR1
Pox_polyA_pol_N
ATP-synt_ab
AAA_24
Zeta_toxin
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
7322652
NCBI-ProteinID:
XP_038969491
UniProt:
A0A679L264
LinkDB
All DBs
Position
4:complement(919216..920841)
Genome browser
AA seq
257 aa
AA seq
DB search
MDEIVINHLSYNYYNRLGRTSTAALQNVNLSFSKGMRVVVCGKNGAGKSTLLSIIAGKKL
VKEESVLVFNKPAFHDTTLSSRIGFVGDWWSDDYAMNITVKDFFAKYKDSKRYRKLLNLF
EISEDKLISSASKGEKKKIQILVNLVTRKDVYIFDEATESLDLISRKLLLEFLKRECIKY
NCIIIYSTHIFDYMEKWCSHVLYLSKGSVAFFSDIGTVTSAKDYTSLADYIFDQMMEETS
EEQKMKTLEDMFLADSE
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatagtaataaaccatttgagttataattattacaatagattaggaagaaca
agcacggcggcattgcaaaatgtaaatttgtcgttcagtaaaggcatgcgagttgtcgtt
tgtgggaaaaacggagcagggaagagcaccctattgagcatcatagcaggcaagaagctc
gtaaaggaggaatccgttttggtgttcaacaagccagcgttccatgacaccacgctgtca
agcagaattgggttcgttggggactggtggagcgacgattacgcaatgaatatcacggtg
aaggatttcttcgcaaagtacaaagattccaagaggtataggaagctactaaatctgttc
gaaatcagcgaagacaaacttatatcttccgcctcaaagggagaaaagaaaaaaattcaa
attctggttaacttggtaacgagaaaggatgtgtacattttcgatgaggcaaccgagtcg
ctggatcttatttcccgcaagctcttgttggagtttctaaagagggaatgtataaagtac
aactgtatcatcatttattcgacacacattttcgattatatggagaaatggtgtagccat
gttttatacctgtccaaaggatcagtggcctttttttctgatatagggactgtaacgagt
gccaaggactacacctccctagcggattatattttcgaccagatgatggaggaaacaagt
gaagagcaaaaaatgaaaactttggaagatatgttcctagcagattccgaataa
DBGET
integrated database retrieval system