KEGG   Plasmodium knowlesi: PKNH_0420600
Entry
PKNH_0420600      CDS       T01094                                 
Name
(RefSeq) CCR4-associated factor 16, putative
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
pkn  Plasmodium knowlesi
Pathway
pkn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pkn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PKNH_0420600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pkn03019]
    PKNH_0420600
Messenger RNA biogenesis [BR:pkn03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     PKNH_0420600
SSDB
Motif
Pfam: ABC_tran AAA_21 NACHT SMC_N AAA_23 AAA_15 RsgA_GTPase AAA_29 AAA_22 Dynamin_N Arf Sigma54_activat ElaD_SseL-like_N Septin nSTAND3 Hyaluronidase_1 MMR_HSR1 Pox_polyA_pol_N ATP-synt_ab AAA_24 Zeta_toxin RNA_helicase
Other DBs
NCBI-GeneID: 7322652
NCBI-ProteinID: XP_038969491
UniProt: A0A679L264
LinkDB
Position
4:complement(919216..920841)
AA seq 257 aa
MDEIVINHLSYNYYNRLGRTSTAALQNVNLSFSKGMRVVVCGKNGAGKSTLLSIIAGKKL
VKEESVLVFNKPAFHDTTLSSRIGFVGDWWSDDYAMNITVKDFFAKYKDSKRYRKLLNLF
EISEDKLISSASKGEKKKIQILVNLVTRKDVYIFDEATESLDLISRKLLLEFLKRECIKY
NCIIIYSTHIFDYMEKWCSHVLYLSKGSVAFFSDIGTVTSAKDYTSLADYIFDQMMEETS
EEQKMKTLEDMFLADSE
NT seq 774 nt   +upstreamnt  +downstreamnt
atggacgaaatagtaataaaccatttgagttataattattacaatagattaggaagaaca
agcacggcggcattgcaaaatgtaaatttgtcgttcagtaaaggcatgcgagttgtcgtt
tgtgggaaaaacggagcagggaagagcaccctattgagcatcatagcaggcaagaagctc
gtaaaggaggaatccgttttggtgttcaacaagccagcgttccatgacaccacgctgtca
agcagaattgggttcgttggggactggtggagcgacgattacgcaatgaatatcacggtg
aaggatttcttcgcaaagtacaaagattccaagaggtataggaagctactaaatctgttc
gaaatcagcgaagacaaacttatatcttccgcctcaaagggagaaaagaaaaaaattcaa
attctggttaacttggtaacgagaaaggatgtgtacattttcgatgaggcaaccgagtcg
ctggatcttatttcccgcaagctcttgttggagtttctaaagagggaatgtataaagtac
aactgtatcatcatttattcgacacacattttcgattatatggagaaatggtgtagccat
gttttatacctgtccaaaggatcagtggcctttttttctgatatagggactgtaacgagt
gccaaggactacacctccctagcggattatattttcgaccagatgatggaggaaacaagt
gaagagcaaaaaatgaaaactttggaagatatgttcctagcagattccgaataa

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