Plasmodium knowlesi: PKNH_0802600
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Entry
PKNH_0802600 CDS
T01094
Name
(RefSeq) U5 small nuclear ribonucleoprotein component, putative
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PKNH_0802600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pkn03041
]
PKNH_0802600
Spliceosome [BR:
pkn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
PKNH_0802600
Complex C
U5 SnRNP specific factors
PKNH_0802600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EFTUD2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
7320511
NCBI-ProteinID:
XP_002258667
UniProt:
A0A5K1V129
A0A384K8T3
LinkDB
All DBs
Position
8:complement(151516..155253)
Genome browser
AA seq
1245 aa
AA seq
DB search
MESKNNLYDEFGNYIGEDIESDGEYSDEEQEEDMSEGAEQEADSNSDSDVDGGADSDELS
DEDSDGGRVKAKERRRKKKKREKETGSDDSEDSRGETEEESDGGGGKRLGDNMDELQRAY
EGVEVFVEQEDTQDIEEATINKINTNVERISFIKKLDVEANRKNFDLVETSLPNNTFSFK
YMSELMTQTQFIKNICIAGHFHHGKTTLIDRIIEYTREKKDDKSKLIYGNGTSGRNLNSG
TVSFFHVNTEMEGVVVRRNNLGKNNSSMVTPFNSKKIDHLINYTDTRLDEQARGLSIKAI
PISLILQNKMYENISSNILLNKKKNNLKYKSYLFNIMDTPGHVNFFDEFLCAVNICECCC
LVVDVTDGCMYVTENVIKTCIYENVKIVLILNCIDKLIMDLRLPPNDAYHKINYTIEEIN
KKIESFCDMLNKSGKEKKKFLLSPLKNNVLFASSIYGVFFTLKSFSKIYCNLYSAYNIDI
DEFAQHLWGDIYFNEKNFSFVSSPVYSNQRRSFVEFILNPIYKIFGYVCSEEKEFLIPFL
KNFNITLKKNDYLFNNKYLLKKINGMIFEDTTAFVDVILDNCPSPLENAKQKTRQIYSGS
LKTKLCYDMMRCLKGDQTDNLMVYIIKNYHRPECIILDLFGRVMCGTIRKGQTVRILGEG
YSPSDDEDMITRVVTHLWIYEGRYRVEVDEVPAGNFVLIGGVDICINKTCTITNVKKKKI
GHAKGLKKESLSGTKVTEILSASELGKSLKKEERTLLLEGEEEETEIFYPLHTKFKYINC
ANSVFKVACEPINPSELPKMLEGLRKIDKTYPLSCTKVEESGEHIILGTGELYLDCILHD
LRKLYGDLEIKVSDPVVQFNETVIETSALNCFAETPNKKNKIHMIVEPLQKELTDDIVQG
LVHLNKGERDTNVEEYLRTVDRLLLEEGAKEVQKARPTEQAVEESGESNKSEESDESDEF
GEVSLKGGKEGEPSAEQRNQTLNYNLDKNVISLLRDKHNWDMLSIRSIWAFGPENNSPNI
LVDDSLYKETNKENLYSIKENIIQGFCWATKEGPLIEECMKNVKVKILKGDIDDDPINRG
AGQIIPTTRRAIYSSFLLATPRLMEPILFTEIICSGDSVSSVYNVLSRRRGHVLKDFPKV
GTPLYMVHAYIPAIESFGFETDLRTHTSGQAFCLSMFDHWHIVPGDPLDKSVILRPLEPA
PIQHLAREFLLKTRRRKGLTEDVTINRFFDDPMLLNIKDEFAEYF
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggagtccaagaacaacctgtacgacgagttcggaaattacataggagaagacattgag
agcgatggggaatactctgatgaagaacaggaggaggatatgagtgagggggcagagcag
gaggcggattcaaattccgattcagatgtagatggcggtgcagatagtgatgaacttagc
gatgaggatagtgacggagggcgtgtaaaggcaaaggagagaagaaggaaaaagaaaaaa
agggaaaaggaaactggtagtgacgatagtgaagatagccgtggtgaaactgaggaagaa
agcgacgggggaggaggaaagcgcctcggcgataatatggacgaactccagagagcgtat
gaaggagtggaagtgttcgtggaacaggaagatacacaagacatagaagaagcaacaatc
aataaaataaatacaaacgtagagcgaatcagctttattaagaagttggacgtagaggcc
aatagaaagaacttcgacttggtcgaaacgagtctcccaaacaacaccttcagttttaaa
tacatgtcggagttgatgactcaaacgcaatttataaaaaatatttgtatagctggtcat
ttccaccacgggaagacgaccctcatagatagaataatagaatatactagagagaaaaag
gacgacaagagcaaattaatttatggcaatggaacaagtgggagaaaccttaacagcgga
actgtgagtttctttcacgtgaacaccgaaatggaaggagtagtagtacgaagaaataac
cttggaaagaataattcatccatggtaactcctttcaattcaaaaaaaatcgatcattta
ataaactacacagatacaagactggatgaacaagcaagaggattatccattaaggccatt
cctatatcacttattctgcaaaataaaatgtatgaaaatatatctagtaatattttactg
aataaaaaaaaaaataatttaaaatataaatcctatctttttaatattatggatactcca
gggcatgtaaacttctttgatgagtttctgtgtgcagtgaatatctgtgaatgctgttgc
ttagttgtggatgtcaccgatgggtgcatgtacgtaactgagaatgtaataaagacatgc
atttacgaaaatgtgaaaatagtattaattcttaactgcatagataagttaataatggac
ctacgtttacccccgaatgatgcataccacaaaattaactacaccattgaagagattaac
aagaagatagaatccttttgcgatatgttaaacaagagtggaaaggagaagaagaaattt
ctcttgtctcctttgaaaaacaacgtgctcttcgcttccagcatttatggagtttttttt
accctcaagtcattcagtaaaatttattgtaatttatacagcgcatataatatcgacatt
gatgaatttgcgcaacacctttggggagatatttactttaacgagaagaacttctccttc
gtttcatctccagtgtattcaaatcagaggagatcatttgtggaattcatcttgaatcca
atttataaaattttcggatatgtatgctcagaagaaaaggaattccttattcctttttta
aaaaattttaatattaccctgaagaaaaatgactacctttttaacaataaatatcttctt
aagaaaattaacggaatgatatttgaagatacaactgcttttgtggatgtcatcctggac
aattgcccgtccccactggagaatgctaaacagaagacaagacaaatttactctgggtcg
ttaaaaacgaagttatgttatgacatgatgaggtgtcttaaaggggaccaaacagataat
ctcatggtttacataattaagaattaccaccgaccagagtgcatcattttggatctcttc
ggtagggtaatgtgtggtaccatcaggaaggggcaaactgtgcgaatccttggggaaggg
tacagtccaagtgacgacgaggatatgataacacgagtggttactcatctgtggatttac
gagggcagataccgtgtcgaggtcgatgaagttcctgcaggcaatttcgttctcattggt
ggagttgacatctgcattaacaaaacgtgcactataacgaatgtgaagaagaagaaaatt
ggacacgcaaaaggattgaagaaggagagcctgagcggaacgaaagtaacggaaatttta
tccgcatcagaattgggaaaaagtttgaagaaggaagaacgaaccctccttctcgagggg
gaggaagaagaaacggagatattctatcctttacataccaagttcaaatatataaattgt
gccaactccgtttttaaggttgcttgtgaacctattaacccatcggaacttccgaaaatg
ttggaaggtctcagaaaaattgacaaaacctatcctttgtcgtgcaccaaagtggaggaa
tccggtgaacacatcatcttgggcacgggggaattatacctggactgcattctgcacgac
ttgagaaagctttatggagacctcgaaattaaggtgtcggatcctgtggtacagtttaac
gaaacggttatcgaaacatctgctctgaactgctttgcggagactccaaataagaagaac
aaaattcatatgattgtggaaccgttgcagaaggagctgacggatgatattgtacaggga
ctggtccacctgaacaagggcgaacgagacaccaacgtggaggagtacttgcgtaccgtc
gacaggctgttgctggaggaaggagcgaaggaggtacagaaggcgaggccaacggaacaa
gcggtggaggaatcgggggaatcgaacaaatcggaggagtctgacgaatccgacgaattt
ggagaagttagtctaaagggaggaaaggaaggagaaccctcggcggaacaacgcaatcaa
acactaaattacaacctagacaagaacgttatctctctactgagggacaagcataactgg
gatatgctatcgataagatccatttgggcattcggcccggaaaacaacagcccaaatatc
ctagtagacgattccttgtataaagaaacgaacaaagaaaatctgtactccattaaggaa
aatattattcaaggattttgttgggctacgaaggagggacctctaatagaagagtgcatg
aaaaatgttaaggtaaaaattttaaaaggtgatatagatgatgacccaataaatagagga
gccggacaaattataccaacaacgagaagagctatatattcgtcatttttattagctact
ccgaggttaatggaaccgattttgttcacagaaattatttgttcaggtgattctgtttca
tccgtttataacgtgttgtctagaagaagaggacacgtattgaaagatttccctaaagtc
ggaacccccctgtatatggttcacgcgtacataccagcaatagagtcctttgggttcgaa
actgatttaaggacacacacaagtggccaggcattttgcctgagtatgtttgaccattgg
catattgtgccaggggaccctctagacaagtcagtcatactgagacccctggagccagcg
cccattcagcacctggcgcgagaatttttgctgaaaacgaggaggaggaaagggttaacc
gaggatgttacgattaacaggttctttgacgacccgatgctcctaaatataaaggacgaa
tttgccgaatatttttga
DBGET
integrated database retrieval system
