Plasmodium knowlesi: PKNH_1470800
Help
Entry
PKNH_1470800 CDS
T01094
Name
(RefSeq) DNA repair protein rhp16, putative
KO
K15083
DNA repair protein RAD16
Organism
pkn
Plasmodium knowlesi
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkn03400
]
PKNH_1470800
DNA repair and recombination proteins [BR:
pkn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
PKNH_1470800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-PARP
zf-RING_2
ResIII
zf-C3HC4
DEAD
zf-RING_11
zf-C2HC_2
zf-rbx1
zf-C3HC4_2
zf-RING_Vps41
Lit
zf-ANAPC11
zf-RING_UBOX
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
7323699
NCBI-ProteinID:
XP_002262584
UniProt:
A0A5K1UUC1
A0A384KAS9
LinkDB
All DBs
Position
14:<3114983..>3119742
Genome browser
AA seq
1527 aa
AA seq
DB search
MGDNLDKIFSKKEQFFKEIIDTNCIFVKELKNWVGTNYIKRLKLKKESLNLTPKLLINRT
KSKASRCRVCGFAIEKNTLRIGYPTKDPRGNYGFISCWVHLDCSRKILYAILYTQENEPH
LKAYLNNEEHNVCEGEYNLHEQFIYENINWEFFFGGFDELDDEEKEKLKETAKPCEIKNG
MKGRNSFEALMNQEKEAFSASNLIKQESRVIENKLKIPKELKFDLLEYQKEGVSWMINQE
ESSVKGGILADEMGMGKTIQAITLILCQKINKLKAEAEGHSKQDNGESAKMECATGIQVK
VKEESDNSVVVINSGGGSSEDGGCVKKEKIKERKSKKATTRKRGSGKKETVYKGKPKNEN
AEELAQGKKDKSQGQTLIIAPIAAVMQWKSEIEKFIEGDILKVYVYHGSVKKVSFEELQK
YDIIITSYAMVEVHFRKIINKYKVPCEYCGRLYLPNTLVLHKKYFCGPDAVRTEKLKKRK
KKNKDTALVAMKKFDDNFVPTPRNVLLEIMNESKRDSKGGKSEEAHSAKGKKKRGKPKKE
ENPITYRSGRTGSDAIIVSSGEDHQESESSSVSNKPVYSPLTRKTSSRVIDLCNLGFEKD
IIDKRISSTHKGKGKNKKNIKWNDVIRDILQNHEYTVDMNNRCKDVLKDIYLSDKMIEEE
ELRRLNMGELKVLLITMGKHIFGTKVELINRVLVSSRYIRQELMLTKGDAQSEVMYKAED
TEKGVLSNMSSTASSAAGMGMTHGGNNGGDSTASFGGGFGDPPDDEDYRGEENGTVNRRK
SGRVRRGGAKGKNNVRRKTTGGNSCTLRKSKRRNSSSAKVKLKRRRRSNSSVVDGSISPS
DSDESFRIDELGSDVEKSSSFSSWESNTKKEDTSDASDSAESYGSIIVEKAKKKRNNKKS
GETSIFDESALHQIEWNRIILDEAHRIKNRNTSTTQSIFNLKCSGYRWCLTGTPLQNRIG
ELYSLIRFLEFYPYAYYFCSKKDCKCMLLNYEMKDNKFCFLCDHSRINHFNYFNKRILRP
IQLFGYNGEGVTSMCYLKSEVLDKILLRRTKGERKKDIKLNPLHITIRKDKLSNEEKDFY
ESLYKQTSTQFDTYVKSNTVLHNYAHIFDLLSRLRQAADHPYLILFGNSFLSDPSGKFIK
KNSSIIPAISNDFVCGICLENVPKKMNISSKCNHNFHKPCLKQYIESFQVGGTCGGNAVD
GDGGGDDDDDDVFSCGPSGGRVRKAHTYHLGEESDQNGGSLYDRNEIVFNEEPSMCDTAN
EADGKKLNKKAKSISVVKFKDKEKKKFVSLSSKEETSVQDLPLGCPVCYVPLTVDFNLLN
QVEEQDEEEMIVCKEETTYINKSFINRINTNEYRSSTKIEAVFEEVKNVIHTTDDKCLIF
SQYCSMLDLIEYHLKKHNIICSKLLGYMPMVSRNNILYNFNEDKHLRVLLISLKAGGEGL
NLQVANRIFIVDPWWNPAAELQAIQRAHRIGQTKTVYATRFIIENTVEEKIVQLQNKKQL
VFDCTIGDSGNAMQKLTKEDLAFLFHA
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atgggtgataacctggataaaatattttctaagaaggaacaattttttaaagaaataatt
gatacgaactgcatattcgttaaggagctaaaaaactgggttggcacaaattacatcaag
aggttgaagctgaaaaaggagtcgctgaatctgacccccaagttgttgataaaccggaca
aagtcgaaagccagccgctgtcgagtgtgcggatttgcgatcgaaaagaacactttacgt
atagggtacccgacgaaagatcccaggggaaactacggttttataagttgttgggtccac
ctggactgcagcagaaaaatcctttacgccattttgtatacgcaagaaaatgagccacac
ttgaaggcgtacctaaacaacgaagaacacaatgtgtgtgagggggagtacaatttgcat
gaacagttcatatatgaaaacataaactgggaatttttttttggaggatttgacgaactg
gatgatgaagaaaaggaaaagttaaaagaaacggccaagccgtgtgaaataaagaatggc
atgaaggggaggaacagttttgaagcgctgatgaatcaggagaaagaagcattcagcgca
agcaatttgattaaacaagaaagtcgagttatcgaaaataaattaaaaattccaaaggaa
cttaaatttgatttgttggaatatcagaaggagggagtatcttggatgattaaccaagag
gagtccagcgttaaggggggtatcttggccgatgaaatgggcatgggaaaaaccatacag
gccattacgctaattttgtgtcagaaaattaataaattaaaggcagaagcggaggggcat
tccaaacaagacaacggggaatcggcaaaaatggagtgcgcaacgggtatccaggtgaaa
gtgaaggaggagtcagacaatagcgtggtggttattaacagcgggggagggagttcagaa
gatggaggatgtgttaagaaggagaagattaaggagagaaaatccaagaaggctacaaca
agaaagaggggaagtggcaagaaggaaaccgtttacaaggggaagcccaagaacgaaaat
gcggaagagcttgcgcaaggtaaaaaagacaagagccaaggacagacactgatcattgcg
cccattgcagcggtaatgcaatggaaatcagagatagaaaaattcatagaaggagatatc
ctaaaagtgtatgtataccatggaagtgtaaaaaaagtatcatttgaagaactccaaaaa
tacgatatcattattacatcttatgccatggtagaggtgcactttcgaaaaataataaac
aagtacaaggttccgtgcgaatattgcgggaggttatatcttcccaacacgctggtgctt
cataagaagtacttttgtgggccagatgctgttagaacggaaaaattaaaaaagagaaaa
aaaaaaaacaaagatactgcactagtggctatgaaaaagtttgacgataattttgtgccg
acgccaagaaatgttctcctggaaataatgaatgaaagtaaaagggatagtaaggggggt
aaaagtgaagaggcccattcggcaaaggggaagaagaaaaggggaaaacccaaaaaggag
gaaaaccctatcacctacagaagcggaagaacaggaagcgatgccattattgtgagctcg
ggggaggatcaccaagaaagcgagagcagttccgtgtcgaacaagccggtgtattccccc
ctgacgaggaaaacgtcaagtagagtaatagacctgtgcaacttaggatttgaaaaagat
ataattgacaagaggatcagcagcacgcataagggaaaaggaaagaataaaaaaaacata
aagtggaatgatgtcattagggatatattgcaaaaccatgagtacactgtcgatatgaat
aatcgttgtaaggatgtgttgaaggatatttatttaagtgataagatgatagaagaggag
gaattgaggagattaaacatgggagaactaaaagttctgctgataacaatgggtaagcat
atttttggaacgaaggttgaacttatcaatagggttttagtttcttccaggtatataaga
caagagctgatgttaaccaagggggatgcgcaaagcgaggtgatgtacaaggcggaggac
acagagaaaggggtgctcagtaatatgagcagcaccgcttcgagcgcagcaggaatgggg
atgacgcatggtggtaataatggtggtgattcaactgcttcttttggtggtggttttgga
gatcctcctgatgatgaagattatcgtggcgaggagaacggaacggtgaatcggaggaaa
agtggcagagtacgacggggaggggcgaagggtaagaacaacgtcaggagaaaaacgacg
ggagggaattcctgcacattgagaaaaagcaagaggagaaacagttcaagcgccaaggta
aagttgaaacggagaagaagaagcaatagtagtgtagtcgacggaagtattagcccaagc
gacagtgatgaatcgtttaggatagatgaacttgggagcgatgtagaaaaatcctcctcc
ttctcctcttgggagagcaatacaaagaaggaagacacaagtgatgcgtccgactcggct
gaatcgtacggttcgataattgttgaaaaggcgaaaaagaaaagaaacaataagaagagc
ggcgaaactagcatttttgacgagagtgctttgcaccaaatagagtggaacaggataatt
ctagacgaagcacacagaataaaaaatcggaacacatcaacgactcaatcaattttcaat
ttaaagtgttcaggctaccgttggtgtttgactggaacaccattacagaacagaataggg
gaattatatagtttgattaggtttcttgagttctacccttacgcatattatttctgttcg
aagaaggattgtaaatgtatgctactaaattacgaaatgaaggacaataagttttgtttt
ctttgtgaccactccagaattaaccatttcaattatttcaacaaaaggatactcagaccg
atacaactgtttggttacaacggggagggagtaaccagtatgtgttatttaaagagtgaa
gtgctggacaaaatactattaaggagaactaaaggagaacgaaagaaggatattaaattg
aatccattacatattacaattagaaaggataaattatcaaatgaggagaaggatttttat
gaatccctttacaaacaaacatctacccagtttgatacttatgtcaagtccaatactgtt
ttgcacaactatgctcatatctttgatttactgagccgattaagacaagctgctgatcac
ccctacttgattctttttggaaattccttccttagtgacccctcggggaaattcataaaa
aagaattcgtccatcatccctgccatttcaaatgacttcgtctgtggtatctgtttggag
aatgtcccgaagaagatgaacatcagtagcaagtgtaaccacaatttccacaagccatgt
ttgaagcagtatattgagagtttccaggtggggggcacatgtggtggtaatgctgttgat
ggtgatggtggtggtgatgatgatgatgatgatgtgttcagttgtgggccttccggtggc
agggtaaggaaggcacacacctaccatttgggggaggagtcagaccaaaacggagggagt
ctctacgacagaaacgaaatcgtattcaatgaagagccatctatgtgtgacaccgccaac
gaagcagatggaaagaaactaaataagaaagccaagtccatttcagtagttaaatttaag
gataaagaaaagaaaaagttcgttagtctgtcaagtaaagaagaaacgtcagtgcaggat
ttacctctcggttgtccagtatgttatgtacccttaactgtagattttaatttgctgaat
caagtggaagaacaggatgaagaagaaatgatcgtatgcaaggaggaaactacttatatt
aacaaaagctttattaaccgaattaatacaaacgaatatcgatcgagtaccaagatagaa
gcagtttttgaggaagtaaaaaatgtgattcataccacagatgataaatgcctaatattt
tcacagtattgttctatgctagatttaattgaataccatttgaagaaacacaacatcatt
tgttcgaagttgttaggttacatgcccatggtatctaggaataatattctctacaatttt
aacgaagacaaacatttacgagttttgctgatcagtttgaaggctggtggagaggggcta
aatttacaggtggccaatcgtatcttcatcgtagatccgtggtggaaccccgccgcagag
ttacaggcaattcagagagcccaccggattggacagacgaaaacagtgtacgccacgcga
ttcatcatagagaacaccgttgaggagaaaatcgtgcagttgcagaataagaaacaactt
gtgtttgactgcaccattggggattcgggaaatgccatgcagaagttgaccaaggaagac
ttggcttttctcttccacgcgtag
DBGET
integrated database retrieval system
