Paenibacillus konkukensis: SK3146_01028
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Entry
SK3146_01028 CDS
T09860
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pkp
Paenibacillus konkukensis
Pathway
pkp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pkp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SK3146_01028 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkp03400
]
SK3146_01028 (nth)
Enzymes [BR:
pkp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SK3146_01028 (nth)
DNA repair and recombination proteins [BR:
pkp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SK3146_01028 (nth)
Prokaryotic type
SK3146_01028 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
Ribonuc_L-PSP
ProQ
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UQZ81872
LinkDB
All DBs
Position
complement(1198656..1199321)
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AA seq
221 aa
AA seq
DB search
MNKKQVREVLNTIAEMFPDAHCELNHTNPFELTIAVLLSAQCTDETVNKVTASLFQKYKR
PEDYLAVPVEELEQDIRRIGLFRNKAKNIQALCAMLLDKYGGEVPKLHEQLVELPGVGRK
TANVVVSNAFGVPAIAVDTHVERVSKRLGMANLKDSVLEVEKKLMKLVPREEWTDTHHRL
IFFGRYHCKAQNPQCGGCPLAATCREGKKRMKSGSRRKPIQ
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaagcaggttcgggaagtattgaatacgatagcggagatgttcccggatgct
cattgcgagctcaatcatacgaatccctttgagctgacgatagccgtattgttatctgcg
caatgtacggatgagacggtcaacaaagtaactgcttccttgtttcaaaagtacaagcgt
cccgaagactatcttgccgttccagtagaagaattggagcaggatattcgtcgaatcggg
ttattccgcaataaagccaaaaacattcaagcgctgtgcgcgatgttgttggacaagtac
ggcggcgaagttcccaagcttcacgaacagctggtcgagcttccgggcgtaggtcgcaag
acggccaatgtcgttgtgtccaacgcttttggcgtccccgctatcgcagtggatactcac
gtagagcgcgtatccaagcggttgggaatggcgaacctgaaggattccgtcctggaagtc
gagaaaaagcttatgaagctggttccccgggaggaatggacggatacgcatcatcggctt
atttttttcgggcgttatcattgcaaagcgcaaaatccgcaatgcggcggctgtcctttg
gccgcaacgtgccgtgaaggaaaaaaacgtatgaaatccggtagtcgtaggaaacctata
cagtag
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