Paenibacillus konkukensis: SK3146_04547
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Entry
SK3146_04547 CDS
T09860
Symbol
vanYB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
pkp
Paenibacillus konkukensis
Pathway
pkp00550
Peptidoglycan biosynthesis
pkp01100
Metabolic pathways
pkp01502
Vancomycin resistance
pkp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pkp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SK3146_04547 (vanYB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SK3146_04547 (vanYB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SK3146_04547 (vanYB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pkp01002
]
SK3146_04547 (vanYB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pkp01011
]
SK3146_04547 (vanYB)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
pkp01504
]
SK3146_04547 (vanYB)
Enzymes [BR:
pkp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
SK3146_04547 (vanYB)
Peptidases and inhibitors [BR:
pkp01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
SK3146_04547 (vanYB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pkp01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
SK3146_04547 (vanYB)
Antimicrobial resistance genes [BR:
pkp01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
SK3146_04547 (vanYB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
DUF1244
Motif
Other DBs
NCBI-ProteinID:
UQZ85258
LinkDB
All DBs
Position
complement(5189829..5190710)
Genome browser
AA seq
293 aa
AA seq
DB search
MKKTSLTVLLLASSMTLFAACEGSNASPSPQTPDTSKPGNAATGTAPNGSAAGSTTTPGS
TATPAPSTAPGAGSAANTGSTGDKGKGTETPKSDSDQVVAKPDSVSVLVNKQFALPSNYE
PADLVYPDVPFIFKEKIEKRKMRKEAAAALEKLFAGAKKDGVNLAGVSAYRSYATQKAVF
NNYVKTDGEEKAKTYSAVPGHSEHETGLAIDVSGSDGKCAAQDCFGATKEAEWLAKHASE
YGFIIRYLKGKEAITGYQYEPWHIRYVGVDMAKEIASKGLTLEEYLNAVPVNK
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacgtctttaaccgtactgctgcttgcctcatccatgaccttattcgccgcc
tgcgaaggctccaacgctagtccgtcaccccaaacgcccgatacgtccaagccgggcaac
gccgcgacaggcaccgcgcctaacggttctgccgcaggctcgacaacaacgccgggcagt
accgcaactccggcgccttcgacggcaccgggggcagggtcggccgcgaacacgggctcg
accggcgacaagggcaaaggaacagagacgcctaaaagcgactccgatcaagtggtcgcc
aagccggacagcgtctccgtgctcgtcaacaagcaatttgcgctgccttccaactatgag
ccggcggatctggtttaccccgatgtgccgtttattttcaaagagaaaatcgaaaaacgc
aaaatgcgtaaagaagctgccgcagcgctggaaaaactgtttgccggagccaaaaaggac
ggcgttaacctggcgggcgtctccgcttaccgttcttatgcgacgcagaaggccgttttc
aataactatgtcaaaaccgacggcgaagaaaaagcaaaaacgtacagcgctgttcccgga
catagcgagcatgagacaggacttgcgatcgacgtatccggcagcgacggcaaatgcgcc
gcgcaggactgcttcggagcaaccaaggaagccgagtggctggccaagcacgcatccgag
tacggcttcatcatccgctatttgaagggcaaggaagcgatcacaggctatcaatacgag
ccttggcatattcgctatgtcggcgtcgatatggccaaggagatcgcttccaaaggtctt
acgctggaagagtatttgaacgccgtcccggtgaacaagtaa
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