Pseudomonas koreensis: AYO71_25275
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Entry
AYO71_25275 CDS
T04647
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pkr
Pseudomonas koreensis
Pathway
pkr00300
Lysine biosynthesis
pkr00550
Peptidoglycan biosynthesis
pkr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AYO71_25275
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AYO71_25275
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pkr01011
]
AYO71_25275
Enzymes [BR:
pkr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AYO71_25275
Peptidoglycan biosynthesis and degradation proteins [BR:
pkr01011
]
Precursor biosynthesis
Amino acid ligase
AYO71_25275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
PipB2_N
Motif
Other DBs
NCBI-ProteinID:
AMT90708
LinkDB
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Position
complement(5641106..5642569)
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AA seq
487 aa
AA seq
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MSLSLNKIFPHAGHDLLIRELALDSRNVRAGDLFLAVPGGRFDGRAHIADALQRGAAAVA
YEVEGATVLPITDVPLIPVKGLAAQLSDIAGRFYGEPSHHLNLIGVTGTNGKTSVTQLVA
QALDLLGQHCGIVGTLGSGFYGALESGLHTTPNPIAVQATLGDLKKAGAKAVAMEVSSHG
LDQGRVTALAFDVAVMTNLSRDHLDYHGTMQAYAEAKARLFAWNDLKCRVVNLDDDFGRQ
LAAEKRESRLITYSLLDSSAYLFCREAQFDDHGVRATLVTPQGEHHLRSTLLGRFNLSNV
LAAVGALLGLDYALDEILKVLPKLEGPAGRMQRLGGGTQPLVVVDYAHTPDALEKVLTAL
RPHVKGQLLCLFGCGGDRDRGKRPLMAEVVERLADQVLVTDDNPRTEDPAVIFDDIRAGF
TAVDKVTFVAGRGQAIAQLITGATADDVIVLAGKGHEDYQEINGVRHAFSDLVEADHALT
AWEVAHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaagtctgaacaagatatttccccacgccggccacgatctgttgatccgtgaa
ctggcgctggacagccgcaacgtgcgcgccggcgatctgtttcttgccgtgcccggcggc
cgtttcgatggccgtgcgcatatcgccgatgccttgcaacgcggcgcagctgccgtggcg
tatgaggtcgaaggcgccaccgtattgccgatcactgacgtgccgctgatcccggtcaag
ggtctggcggcgcaactttcggacattgccgggcgtttttacggtgagccgagtcatcac
ctgaacctgatcggcgtcactggcaccaacggcaagaccagcgtgacccaactggtcgcg
caggcacttgatctgctcggccagcattgcggcatcgtcggcaccctcggttccggtttc
tacggtgcgctggaaagcggcctgcacaccacgccgaacccgattgccgtgcaagcgacc
ctgggtgacctgaaaaaggccggtgccaaagccgtggccatggaagtctcgtcccacggt
ctggatcagggccgggtcaccgcgctggcgttcgacgtggcggtgatgaccaacctgtcc
cgcgatcatctggattatcacggcaccatgcaggcgtacgccgaggccaaggcccggctg
ttcgcctggaatgacctgaagtgccgcgtggtcaacctcgacgacgatttcggccggcaa
ctggcggcggaaaaacgcgagtcgcgtttgatcacctacagcctgctcgacagcagtgcc
tacctgttctgccgcgaagcgcagttcgacgaccatggtgtacgcgccacgctggtcacg
ccgcagggcgagcatcacctgcgcagtacgctgcttggtcgtttcaacctgagtaacgtg
ctggccgcagtcggcgccttgctcggtctggattacgccctcgacgaaattctcaaagtg
ctgccgaagctcgaaggcccggccggtcgcatgcagcgtctgggtggtggcacgcagccg
ttggtggtggtcgattacgcccacaccccggatgcactggaaaaagttctcacagcactg
cgcccgcacgtcaaaggccaactcctgtgcctgttcggttgcggtggcgatcgtgatcgc
ggcaagcgtccgttgatggccgaagtggtcgagcgtctggctgaccaagtgttggtcacc
gacgacaacccgcgcactgaagatccggcagtgatcttcgacgacatccgcgccggtttc
accgctgtggataaagtcactttcgtcgccggtcgcggccaggccatcgcgcaacttatc
accggtgcgaccgctgacgacgtgattgttctcgccggcaaaggtcacgaggactatcag
gaaatcaacggcgtgcgccatgccttttccgatctggtcgaggccgatcatgccctgacc
gcgtgggaggtggcccatgcttaa
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