Pseudomonas khavaziana: QYQ93_06720
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Entry
QYQ93_06720 CDS
T10400
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pkv Pseudomonas khavaziana
Pathway
pkv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pkv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QYQ93_06720 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkv03400
]
QYQ93_06720 (nth)
Enzymes [BR:
pkv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QYQ93_06720 (nth)
DNA repair and recombination proteins [BR:
pkv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QYQ93_06720 (nth)
Prokaryotic type
QYQ93_06720 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
DUF2400
HHH_8
Motif
Other DBs
NCBI-ProteinID:
WWA77928
LinkDB
All DBs
Position
complement(1554276..1554914)
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AA seq
212 aa
AA seq
DB search
MNAAKRLEIFRRFHEENPEPKTELAYSSPFELLIAVILSAQSTDVGVNKATAKLYPVANT
PAAIYALGVEGLSEYIKTIGLYNSKAKNVIETCRLLLELHGGEVPQTREALEALPGVGRK
TANVVLNTAFRQLTMAVDTHIFRVSNRTGIARGKNVVEVEKQLMKFVPKPYLLDSHHWLI
LHGRYVCQARKPRCGSCRIEDLCEYKDKTSDD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgcaaaacgcctggaaattttccgcaggtttcacgaagaaaatccggaaccc
aaaaccgagctggcctactcctcgccgttcgaattactgattgcggtgatcctgtcggcc
caatccaccgacgttggcgtcaacaaggcgacggccaagttgtacccggtggcgaatacc
cccgcagcgatctatgccctcggcgtggaaggcttgtccgaatatatcaagaccattggc
ctgtacaacagcaaagccaagaacgtgatcgaaacatgccgcctgctgttggagttgcac
ggtggcgaggtaccccaaacgcgggaagcccttgaggccttgccgggcgtagggcgtaag
acggctaatgtcgtgctcaatacggcattccggcaactgaccatggcggtggacacgcac
attttccgcgtcagtaaccgaaccggtattgcacgcgggaagaatgtggtcgaggtggaa
aaacaactgatgaagttcgtacccaagccgtatctactcgactcccaccactggcttatc
ctgcacgggcgctacgtttgccaggcgcgcaagccacgctgcggcagctgtcgtatcgaa
gacctgtgtgaatacaaggacaagacgtccgacgattga
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