Psychrobacter sp. KH172YL61: PKHYL_14780
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Entry
PKHYL_14780 CDS
T08351
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pky
Psychrobacter sp. KH172YL61
Pathway
pky03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pky00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PKHYL_14780 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pky03400
]
PKHYL_14780 (nth)
Enzymes [BR:
pky01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PKHYL_14780 (nth)
DNA repair and recombination proteins [BR:
pky03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PKHYL_14780 (nth)
Prokaryotic type
PKHYL_14780 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
Cas_Csm6_CARF
C7_FIM2_N
Motif
Other DBs
NCBI-ProteinID:
BBI67287
UniProt:
A0A7U6KN87
LinkDB
All DBs
Position
complement(1176273..1176959)
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AA seq
228 aa
AA seq
DB search
MSKTVKHKTADTPPSRRMPNRDVRPFFEKLAATIDEPVTELNYGSNFELLIAVILSAQAT
DVSVNIATQQLYPVANTPEAILALGEEGLKTYIKNIGLYNAKAKNVIKTCRDLIEKFDST
VPDNRKDLESLAGVGRKTANVVLNTAFGQPTMAVDTHIFRVGNRTGLATGKTVLIVENKL
VERIPDDFIVDAHHYLILHGRYTCQARTPKCGACPVYEECMFKDKATF
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaacggtcaaacataaaacagccgatacaccgccctctagaagaatgcccaat
cgcgatgtgcgtccattttttgaaaagctagcggcgacgattgacgagcctgtcaccgag
ctaaattacggcagtaatttcgagctgctcatcgccgttatcttatctgcacaggcaact
gatgtgagcgtcaatattgccactcagcagttgtaccccgtggcgaacacacctgaagct
atactggcactaggcgaagaaggtctaaagacgtatatcaaaaatattggcttatataac
gcaaaagccaaaaatgtcatcaagacttgccgcgatttgattgaaaagtttgatagcacc
gtccctgacaaccgcaaagatctagaatcattagctggtgtggggcgtaaaaccgccaac
gtagttttgaatactgcttttggtcagccaaccatggcggtcgacacgcatatctttcgc
gtcggcaatcgtactggactcgctactggtaaaacggtgctcatcgtcgaaaacaaactg
gtcgagcgtatacccgatgactttatcgttgatgcgcatcattatcttattttgcacggg
cgctatacctgccaagcgcgtacacccaaatgcggcgcttgccccgtctatgaagagtgc
atgtttaaagataaagcgaccttttag
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