KEGG   Parvibaculum lavamentivorans: Plav_2416
Entry
Plav_2416         CDS       T00580                                 
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
pla  Parvibaculum lavamentivorans
Pathway
pla00300  Lysine biosynthesis
pla00550  Peptidoglycan biosynthesis
pla01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pla00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Plav_2416
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Plav_2416
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pla01011]
    Plav_2416
Enzymes [BR:pla01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     Plav_2416
Peptidoglycan biosynthesis and degradation proteins [BR:pla01011]
 Precursor biosynthesis
  Amino acid ligase
   Plav_2416
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase ADH_zinc_N RraA-like
Other DBs
NCBI-ProteinID: ABS64025
UniProt: A7HVU2
LinkDB
Position
2607510..2608958
AA seq 482 aa
MAALMGSGPALPEGGATEILGLTADSRAVRPGYLFAALPGTKLDGTKFIAQAIEKGAAAL
LVPLDAAVAANVPVIADRNPRRRLALMAAAFFGDQPRTVAAVTGTNGKTSIATFLREIWA
ALGEEAASLGTLGVTSAKGERSLGYTTPDPVALQAELAALAKEGVTHLAMEASSHGLAQY
RLDGVKLRAAGFTNITRDHMDYHTSFDDYLYAKLRLFGEVMGPGGIAVLNADSAQYAEFE
AVCWARGHRIISVGRKGKGIFLAAARPTPRGQTLELVHEGKNYAVNLPLVGGFQASNALV
AAGLAIGCGGAAEKVFAALEKLTGAKGRMEEAAHLPNGASVYIDYAHTPDALENALEAIR
PHTAGRLSIVFGCGGDRDAGKRPLMGAAAAKLADIIYVTDDNPRSEAADAIRAAVLKGCP
GAIEIGDRAAAIETAMRALQPGDVLVVAGKGHETGQIVGDKVLPFSDHEAIREAAKKIGG
AA
NT seq 1449 nt   +upstreamnt  +downstreamnt
ttggcggcgttgatggggtcaggtcccgcgcttcccgaagggggggcgacggagatactc
ggcctgacggcggacagccgcgcggtgcgccccggttatctcttcgcggcgctgcccggc
acgaagctcgacggaacgaaattcatcgcccaggccatcgaaaaaggtgccgccgcgctg
ctggtgccgctcgatgcggcggtggcggcgaatgtgccggtgatcgcggatcgcaatcca
cgccgccggttggcgctgatggcggccgcattcttcggcgaccagccgcgcaccgtggcg
gcggtgacgggaaccaacggcaagacatccatcgcgaccttcctgcgcgaaatctgggcc
gcgctcggcgaagaggcggcaagcctcggcacgcttggcgtcaccagcgcgaagggcgag
cggtcgctcggctatacaacgcccgatcccgtggcgctgcaggcggagctggcggcgctg
gcgaaagaaggcgtgacgcatctggcgatggaagcatcgagccacgggcttgcacaatac
aggctcgacggcgtgaagctgcgcgcggcgggcttcaccaatatcacgcgcgatcacatg
gactatcacaccagcttcgacgactacctctatgcgaagctgcgccttttcggcgaggtg
atgggaccgggcggcatcgccgtgctcaatgccgacagcgcgcaatatgctgaattcgaa
gccgtgtgctgggcgcgcgggcatcgcatcatctccgtcgggcggaagggcaagggcatt
ttcctcgccgccgcgcggccgacgccacgcgggcagacgctggagctggtgcatgaggga
aagaattatgccgtgaacctgccgctggtcggcggcttccaggcatcgaacgcgctggtg
gcggcggggctggccataggctgcggcggcgcggcggagaaggttttcgcggcgctcgag
aagctgacgggcgcaaaggggcggatggaagaggcggcgcatctgccgaacggcgcttcc
gtctatatcgattacgcccatacgccggacgcgctcgaaaacgcgctggaggcgatccgc
ccgcatacggcgggaaggctttccatcgtgttcggctgcggcggcgaccgggacgcaggc
aagcggccgctgatgggcgccgcggcagcgaaacttgccgacattatatatgtgaccgac
gacaatccgcgcagcgaggcggcggatgcaatccgcgcggccgtgctcaaaggctgtccg
ggggcgatcgagatcggcgacagggcagcggccatcgaaacggcgatgcgggcgctgcag
ccgggcgacgttctcgtggtggcggggaaaggccatgagaccgggcagatcgtcggcgac
aaggtgctgccgttctccgaccatgaggcgatccgcgaggcagcgaagaaaataggaggt
gccgcatga

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