KEGG   Paraburkholderia largidicola: PPGU16_84880
Entry
PPGU16_84880      CDS       T10364                                 
Name
(GenBank) protein VirD4
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
plad  Paraburkholderia largidicola
Pathway
plad03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:plad00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PPGU16_84880
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:plad02044]
    PPGU16_84880
Enzymes [BR:plad01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     PPGU16_84880
Secretion system [BR:plad02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   PPGU16_84880
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind
Other DBs
NCBI-ProteinID: BCF95421
UniProt: A0A7I8C4N3
LinkDB
Position
PPGU16_p3:43128..44780
AA seq 550 aa
MSQAPGLIVGWHKKLGYLVFRGQQFVSLIAPTRSGKGVGFVIPNLLTYPDSMIVLDVKLE
NYKYTSKFRAEHGQEVYLFAPFSEDGRTHRWNMFDAVRKRPQHLWFGDLLTLAESYYPSD
VDPKTKFFNDSSRNLFVGLALLLLETPSLPCTPAEIFRQGSGYGKPIKTHIKEMIDKRNG
DNQQRPLSAECLDALNRFLQIPDITLGNVLATFNAPLLIFADPIVDAATSVSDFDLGEVR
SKRMTIYFGVQPDRLQGGDAGLLINLFYSQALILNMRELPQNNPALKYQCTLLNDEIPAV
GRLAVIAKSNAYIAGYNMRLATIAQSQSQLEDEKLYGKHGAKTLLTNHALQMMYPPREQS
EAEEYSKMLGTYTMKARGRSRSRGKGSSTSINESDQKRPLMMPQELREMKKNQMIISLEN
TKPIQCEKAYFYADTLFTDRLKALSPYLAAVETKLPTQKQLEHAAFVLCELQSDVPTLDL
AALYAAAQKPRTAPVALRPVKTGDLAALKVSDIANYEQMKESLFKLLPGFANVQKAMSAV
SSANAAAVAS
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgagtcaagcaccgggtctgattgtcggctggcacaagaagctgggctatctcgtattc
agggggcagcaattcgtatcgctcattgcgcctacccgctccggtaagggcgtgggcttt
gtgatcccgaatcttctcacctatcctgattcgatgatcgtccttgatgtgaagctggaa
aactacaagtacacctcgaaatttcgggcagaacacgggcaggaggtttatcttttcgcg
ccgttttctgaggacggccgcacgcatcgctggaatatgttcgacgctgtacgcaaacgt
ccgcaacacctttggtttggcgatctgctcacgctggcggaatcgtattaccccagcgat
gtcgacccgaaaacgaagttcttcaacgatagttcgcgcaatctgttcgtcgggctcgcg
cttctcctgttggaaacaccgtcgttgccgtgcacgccggccgaaatcttccgccagggg
tccgggtacggtaagccgatcaagacgcatatcaaggagatgatcgacaagcgcaacggc
gacaaccagcagcgcccgctgtccgcagaatgtctggatgcgctgaatcgcttcctgcag
atcccagacataacgcttggcaacgtgcttgcaacgttcaatgcgccgctgctcatcttc
gcggatccgatcgtggatgccgcaacgagtgtgtctgacttcgatctgggcgaagtgcgc
agcaagcgcatgacgatctatttcggggtgcagccggatcgtctgcagggcggcgacgcg
ggtttgcttatcaacctgttctattcgcaggcgctgattctcaacatgcgcgagctgccg
caaaacaatccggcgctgaagtatcaatgcacgctgctgaacgatgaaatcccggccgtt
gggcgtctcgccgtcattgcgaagtcgaacgcctacatcgccggctacaacatgcgcctg
gcgaccatcgcgcagtcgcagtcgcagctggaagacgaaaagctgtatggcaagcacggc
gccaaaacgctgttgacgaaccacgccctgcagatgatgtatccgcctcgcgagcaatcc
gaagctgaggaatattccaagatgctcggcacgtacacgatgaaggctcgcggccggtcg
cgtagtcggggtaaagggtctagcacgagtatcaacgagtcggaccagaagcgtccgctg
atgatgccgcaagagctgcgcgagatgaagaaaaaccagatgattatttcgctcgaaaac
accaagccgatccagtgtgagaaagcgtatttctacgccgacacgctctttaccgatcgg
ctgaaggcgttgagtccatatctggccgccgtcgaaacgaagttgccgacgcaaaagcag
ctggagcacgcggcattcgtgctgtgcgagttgcagagcgatgttccgacgctcgatctt
gctgcgctctatgcggctgctcaaaaacctcgtaccgcgcctgtagcgcttcgtcccgtg
aagacgggcgatcttgccgcactaaaggtttcggacatcgcgaactatgaacagatgaaa
gaaagcctgttcaagttgctgccggggttcgccaatgtccagaaagcgatgtctgcagtt
tccagtgctaacgctgcagctgttgccagctga

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