Plasmodium sp. gorilla clade G2: 39741412
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Entry
39741412 CDS
T10353
Symbol
PADL01_0819100
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3, putative
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
plag Plasmodium sp. gorilla clade G2
Pathway
plag03018
RNA degradation
plag03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plag00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
39741412 (PADL01_0819100)
09123 Folding, sorting and degradation
03018 RNA degradation
39741412 (PADL01_0819100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plag03019
]
39741412 (PADL01_0819100)
03041 Spliceosome [BR:
plag03041
]
39741412 (PADL01_0819100)
Messenger RNA biogenesis [BR:
plag03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
39741412 (PADL01_0819100)
mRNA degradation factors
5'-3' decay
Lsm complex
39741412 (PADL01_0819100)
Spliceosome [BR:
plag03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
39741412 (PADL01_0819100)
Complex C
U2 snRNP components
39741412 (PADL01_0819100)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
BioT2
Myosin_TH1
DUF1480
Motif
Other DBs
NCBI-GeneID:
39741412
NCBI-ProteinID:
XP_028537905
PlasmoDB:
PADL01_0819100
UniProt:
A0A2P9BYS8
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All DBs
Position
8:complement(777598..778240)
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AA seq
91 aa
AA seq
DB search
MEKIALIQNPLDYIRLNMEEEIFLKCKGDRELIGKLDAYDNHLNMILSNVRETYKYSVKE
NEEETVKKMERSLDMVFVRGDSIILVSSAMK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatagcattaatacaaaatcccttagattatattcgtttaaatatggaggaa
gaaatatttttaaaatgtaaaggagatagagaactcattggaaaattagatgcttatgat
aatcacttaaatatgattttatcgaatgtccgtgagacttataaatatagcgttaaagaa
aatgaagaagaaactgttaagaaaatggaaagaagtttagacatggtttttgttagagga
gattctatcatattagtatcatctgctatgaaataa
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