Poecilia latipinna (sailfin molly): 106939000
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Entry
106939000 CDS
T08005
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106939000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plai03400
]
106939000
Enzymes [BR:
plai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
106939000
DNA repair and recombination proteins [BR:
plai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
106939000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
AT_hook
DAG1
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
106939000
NCBI-ProteinID:
XP_014876709
Ensembl:
ENSPLAG00000000712
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
MEEKQFTALTVPTDYFQQWYQANQQHPEAQHMMSYHSLGHYADGYMEEPVMAELSVHREP
SEPQEPFYHSYPPASGHYQEQIGQPSFSEHPQHLQHLQHLQHPQHLQPPQQTEQQHMIQQ
QEPDLQPHAPPPPAVTPVKKKRGRPAKQQVADKEVKEEMDEAEAAKKAKRVLNRFNGMSV
AEVMAKTLPDVLAYNLDILIIGINPGLLSAYKGRHYPNPGNHFWKCLFLSGLTEQQLNYM
HDQSLPEKYSIGFTNMVERTTPGSKDLSSKEIREGGRQLLEKLQKYKPLIAAFNGKGIYE
IFCKEIFGVKAKNLEFGLQPYKIPDTETVCFLMPSSSPRCAQFPRAQDKVHFYIKLKELR
DQMKGLTPNGEVLETRYSFDLQLAKEDAKRMAIKEEQVDPEYESCSGLHDGVRQSS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaagcagtttacagcattgacggttcccacggattattttcagcagtggtac
caggccaatcagcagcaccctgaggcccaacacatgatgtcgtatcacagcctgggccat
tacgccgacggctacatggaggagcctgtcatggcggagctgtctgtccacagggaacca
tcggaaccccaggagcccttttaccacagctaccctccggcctccggtcattaccaggag
cagattggccagccgagcttcagcgagcatccgcagcatctgcagcatctacagcacctg
cagcacccgcagcacctacagcccccgcagcagactgagcaacagcacatgatccagcag
caggaacctgaccttcaacctcacgctcctcctcctccagccgtgacgccggtaaagaag
aaaagaggccgaccggctaagcagcaggtggcggataaggaggtgaaggaggaaatggat
gaagcggaagctgccaaaaaggccaaacgggttctgaaccgcttcaacggcatgagcgtg
gctgaagttatggcaaagacgctccctgacgtcctagcctacaatcttgacattttaata
attggaatcaacccaggactattatcagcctacaaaggacgccattatccgaacccaggg
aaccatttctggaaatgtctatttctgtctggtctgaccgaacagcagctcaactacatg
cacgaccagagcctgcctgagaaatacagcatcggcttcaccaacatggtggagaggacc
acaccgggcagcaaggacctgtccagtaaggaaatccgggagggaggtcgacagctgctc
gaaaagctacagaagtacaagccgctaatcgccgcttttaatggcaaagggatttatgaa
atattttgcaaagaaatctttggtgtaaaggccaagaatctggagtttggtctgcaacct
tacaaaatcccagacactgaaacggtgtgcttcctgatgccgtcgtcgagcccccgctgt
gcccagttcccccgcgctcaagacaaggtgcatttctacataaagctgaaggaactgcgt
gaccagatgaaaggtctgacgcccaacggggaggtgctggagacgcggtactctttcgac
ctgcagctggctaaagaggacgctaaaaggatggcaatcaaagaagagcaagtggatcca
gaatatgaaagctgtagtgggcttcatgatggggtgaggcagagcagctga
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