Poecilia latipinna (sailfin molly): 106945077
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Entry
106945077 CDS
T08005
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1-like
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
plai
Poecilia latipinna (sailfin molly)
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plai03036
]
106945077
03400 DNA repair and recombination proteins [BR:
plai03400
]
106945077
Chromosome and associated proteins [BR:
plai03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
106945077
DNA repair and recombination proteins [BR:
plai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
106945077
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCHD1_S5
HATPase_c_3
SMC_hinge
TXNDC16_3rd
EPO_TPO
HATPase_c
BORCS6
Motif
Other DBs
NCBI-GeneID:
106945077
NCBI-ProteinID:
XP_014883994
LinkDB
All DBs
Position
Unknown
AA seq
1993 aa
AA seq
DB search
MSFFQACALAELVDNALSATAKNTGSRSIEIRMLFNKTLGKPAIIVLDNGSGMTSKHLNN
WAVYRLSKFTRENSTFESEAEGYVHPAHVPRSLNSDISFFGVGGKRAVFHMGNAVRMISR
PLGSPDVHELVLSKDEFQKKEQKKQDVYRSKILNRMPGDFSHITNDEQFLRTIIAEETEK
ESFTVVVITGIFQDHINYLKKNFKEWTRELAHIYHYYIHGVNGNCKADISPTSDDFRRID
IVVTLWASKKKERMNLREVEDDMQTLFINAAKDTFEFRATTPDRGIVEGLLRYHPFLYDK
ETYPEDPFVYQAPGEDDYNNERESGATGQARGRRDIFQCFWNGRLIPYTAISGFDWCQKK
GFKLPEECYSRFSGVLFTDSKFHVSATKLKFMELEKQLKQPGTHFTRICPIQKCPRRGDI
QKEFTNWLQNCHKTLDKQVEFIDYKGTVKRPEGQPKKKQQPWAVFSSIKQHGRRYNAGDI
VMFQKTPSILCGTVVKFFLHGNHKGDTFATGGDVEIKCEPEGLYEEIIKVLPIAKIDKTA
TDESIKDHIEDERKKLPHSLKVNWAEGNVLPENAVLPAGTPIGPLEVEILNSDGDSISSK
IQMGKHRINLSVSLKVVFNEDEVLSNTAPYIAGKGHCFNKFENFRTLGKYTLTLSTVLND
NITTVYGGRELPKYKHEFTIQEGDAESFSVGELSSSLRVGEPFDIPLQMKDCYNHPTKPP
PNIKPALQSTDLELSYETTTCSGVLLTIQGVKAKGKLLNSAMFESYDLKVTLPGLKDDTQ
TTKISLHPGNPHSLLVKSKTNPVEVENGNPVSFEIEVHDEAGNITRFPGLEVHCQIPGLL
LMTKDCSAGKAELVTKPVKEKIVNGEPQILEARFEIPSQKQVAPVTRQLMVMPSKQISRM
ELFSQGEEELVLKNNEKIKWQAGGVLEKLFYKLYDEAGREVPITAEIASNIKVTWGTDVD
QRNLVNGRLPDLQIPTHVDEEHLYQVSYQEKKVSFCFKIVPCPDEPAGLKVTLPQSIVKL
GETLSGDIKLELVDQYNNVTKKLTSTCGKSFSAEAEGLENSSCIVAIGVRFPSGSPGSRV
ICFSYKDYTENVVLEVAAGVPSQLKLVSEPNQNGHDIPTPFLLQLCDDWGNPSPDENINV
EIKPSPVTLTLTTEVLTPMETEGKTCIKVNRVEGSKGYYALEFKGSLKGKSIPGPSVNLT
LLPDPNKPVRLSVDYEKNGKFCAGGKFPVFSVTVFSEEGKAIKPADLSMLLWEGTPSMRP
TIVTELKYRKPVEDEWKDCYEFREEEIPTRVGEYTVEFSLQTNKKEDHLWSQISVNVVAN
EPVKLEPDCQQQTPVVFYCTEMANRILVENMTLKITDQFGNLAGQNLNGTVSISIKCPEE
ERSRILPLFDGKTKTISVKLIEGSALINSLAIMENSPGENGSRYILHFKPEVTNAPTSLN
LFELPFHFYNDTENQQKKVELMKKKDELTESVKECDKLFDKIRNEKDLLKNNVKDSTKKE
VSLRNELNERGIRTEHPLSITDSKRCLEQKTSELETIEKTPRRIFSIHRNFSGPDILEMV
GELAFVADDDIARVISWQLQGDMDCIITTTTEAAQKCPEDFCLLVDLLDTENQQKKVELM
KKKDELTESVKECDKLFDKIRNEKDLLKNNVKDSTKKEVSLRNELNERGIRTEHPLSITD
SKRCLEQKTSELETIEKTPRRIFSIHRNFSGPDILEMVGELAFVADDDIARVISWQLQGD
MDCIITTTTEAAQKHYEDTQGNQQVMALDSMFVYQEDRPLPHISNRQELFKPSGNPTFAR
KHLIYRDKQLSCDRNNLIKVFKNLLGDTILMDDLISATNYRKALVENRIQCPTILTRTGE
RVSAKGKFGGSQNRAPPIDRLKNVFGAPLPDNYEELKEQIDVLHRYCAAVEEIEKAEKDH
NDHSTKWFSEILQKEKEKDAMTKELEKINKQLASVPVRAGKRASGNSEESPGIASKRQRR
GSVDEPGSFSEMN
NT seq
5982 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttttccaagcctgcgctcttgctgagctggtggacaatgctctttcagcaaca
gcaaaaaacactggaagcaggagtatagagataaggatgctttttaacaaaacattgggg
aagcctgctatcattgtcttggataatgggtctggtatgacctccaagcatctcaataac
tgggctgtttacagactctctaagttcacaagggaaaatagcacatttgaaagtgaagca
gagggatatgttcatcctgctcatgtgcctcgcagtctcaacagtgacatttcctttttc
ggagttggaggaaaacgagcggttttccacatggggaatgctgtgagaatgatcagcaga
cctctaggctctccagatgttcatgagctggttctatcaaaggatgaattccagaaaaaa
gaacagaagaaacaggacgtttacagaagcaaaattctcaacaggatgcctggtgacttc
tcacacataacaaatgatgaacaatttcttcgtaccatcatcgctgaagaaactgagaaa
gagagcttcactgtggttgtcatcacaggaatatttcaggaccacatcaattacctgaaa
aagaactttaaggagtggaccagagagctggctcacatttatcattactacattcacggg
gtcaatggaaactgcaaagcagacatctctccaacatcagatgatttccgaagaattgac
attgttgtgactttgtgggcttcaaaaaaaaaagaaaggatgaatctcagagaagtggaa
gacgacatgcagactctattcataaatgcagccaaagacacatttgagttcagggccacc
actccagacagaggcattgtggagggtctccttcgatatcatccgttcctttatgacaag
gagacctaccctgaggatccatttgtttatcaagctcctggtgaggatgattataataat
gaaagggagtctggagccacaggtcaagcaagaggaaggagggacatctttcagtgtttc
tggaacggacggctcatcccttacaccgccatttctggatttgactggtgccagaagaaa
ggatttaaattaccagaagaatgctatagccgcttttctggggtgcttttcactgatagc
aaatttcatgtcagtgcaaccaagctgaaattcatggaactggagaagcagttgaagcaa
ccgggcacacatttcacccgtatttgtcctattcagaaatgcccaagaagaggggacatt
cagaaagagtttacaaactggctacaaaactgtcacaagacgctggacaaacaggtggag
tttattgactacaaaggaactgtgaaacgaccagaagggcagcccaagaaaaagcaacaa
ccctgggcagttttctcctctattaagcaacacggcagaagatacaatgcaggggacatt
gtaatgtttcagaagacaccatcaatactttgtggtactgtggtaaaattctttctgcat
ggaaatcataaaggagacacgtttgccacaggcggagatgtggaaatcaaatgtgagcct
gaaggactttatgaagagatcatcaaggtcctacccattgctaagattgacaagactgcc
acagatgaaagcatcaaagatcacattgaggatgaaaggaagaagctcccacattcccta
aaagttaactgggcagaaggcaatgttttgcctgaaaatgctgtgttgcctgctgggact
cctattggacctcttgaagttgaaattctaaacagtgatggagactccatatcctcaaag
attcagatggggaaacacaggataaatctgagtgtttcactcaaggtggtgtttaatgaa
gatgaagttctttctaacactgccccctatatagctgggaaaggacactgcttcaacaaa
tttgaaaacttccgcacattggggaagtacacactgactctatctactgtgttaaatgac
aacattaccacagtttacggtggcagagagcttccaaaatacaagcacgagtttactatc
caagagggagatgcagagagcttttctgttggggagctgagttcctctttacgtgtggga
gagccgtttgacattcctctgcagatgaaagactgttataaccacccaacaaaacctcct
cccaatatcaaacctgctcttcaaagcaccgatctggaactgagttatgagacgacaact
tgcagtggggtcttgttaaccatccaaggtgtcaaagccaagggaaaactcctaaactcc
gccatgttcgagagttatgacctgaaagtgacactccctggacttaaagatgacacacag
accacgaaaatctctcttcatcctggaaatccccattcacttcttgtgaaatcaaaaaca
aacccagtggaagtggagaatggaaacccggtgagctttgagattgaagtccatgatgag
gctgggaacatcactcgcttccccggactggaagttcactgccagattcctgggctcctt
ttgatgacaaaagactgcagcgcaggaaaagctgagcttgtgacaaagcctgtaaaagaa
aaaattgtcaatggagaaccgcaaatactagaagctagatttgaaatacctagtcagaag
caggttgcaccagtgactagacagctgatggtcatgcccagcaagcagatctcgcggatg
gagcttttctctcagggcgaggaagagctggtgttgaagaacaatgaaaagataaagtgg
caagccggaggagtgctggagaagctgttttacaagctgtatgatgaggctggaagagag
gtcccaattactgctgaaattgcctccaatattaaggttacctggggaacagatgttgat
cagagaaatctagtaaacggcaggctaccagatctacagattcccacccatgtggatgaa
gaacacctgtaccaagtctcctaccaggaaaagaaagtttccttctgcttcaaaattgtg
ccttgtcctgatgaaccagcagggctaaaagtaactctgcctcaaagcattgtgaaactt
ggtgaaaccttatctggagacatcaagctggaacttgtggaccagtataataatgtaacc
aagaagctgacctccacctgtgggaaatccttttctgcagaagccgaaggtcttgagaac
agcagttgcattgtggcgataggagtccgtttcccctcggggtctcctggatccagagtg
atttgcttcagctacaaagactacacagaaaatgtcgtccttgaagtggcagcaggagtt
ccttcccaacttaaactggtcagcgaaccaaaccagaatggtcatgatattcccacacca
ttccttctccagctgtgtgatgattggggaaatccgtctccagacgaaaacataaatgtt
gagataaaaccttctcctgtgactctaacgttgacaacagaggttttaactcccatggag
acagaagggaagacctgcatcaaagttaatcgtgtagaaggatcaaaagggtactatgca
ctggagtttaaaggttccctaaaaggtaaatccatccctggtccatcagtgaacctcact
ctcctccctgatcccaacaaacctgttagactctcagtggattatgagaaaaacgggaag
ttttgtgctggaggcaaatttccagttttctcagtgacagtgttttctgaagaagggaaa
gctattaaacctgcagatctgtccatgttgctgtgggagggaacgccatcaatgcgtcct
acaatagtcactgagctaaaatacagaaaacctgttgaagatgagtggaaggactgttat
gaatttagagaagaagaaatcccaacacgtgttggggaatacactgtagagttttctcta
caaaccaacaaaaaagaagaccatctttggagtcagatcagtgtaaatgttgtggccaat
gaacccgtcaaactagaacctgactgtcaacaacaaactccagttgttttctactgtaca
gagatggccaatcgaatcttggttgaaaacatgactttgaagataacggatcagtttgga
aatttagccgggcagaacctgaatggtactgtgtccatctcaataaagtgccctgaagaa
gaaaggagcagaatcctccctctgtttgatggaaaaactaaaaccatttcagttaagtta
atagaaggaagtgccctcatcaatagtttagcgatcatggagaacagtcctggtgagaat
ggaagcagatatattctccacttcaagccagaagtgacaaatgctcccacatctctgaat
ctctttgaactgcccttccatttttataacgatactgagaaccaacaaaaaaaagttgaa
ctgatgaagaagaaggatgaactgactgagtctgtaaaagaatgtgataaattatttgat
aaaattcgcaatgaaaaggatttgctcaaaaataacgtcaaagactcaactaagaaagaa
gtttctctgagaaatgagctgaatgaaagaggcataagaacagaacacccattatcaatc
acagatagtaaaagatgcttagagcagaagacatccgaattggaaacaatagagaaaact
ccaagaagaatcttttccattcatagaaatttcagcggtcctgacattcttgaaatggtt
ggtgaactggcctttgttgctgatgatgatattgcaagggtcatctcctggcaattgcag
ggagacatggactgcatcatcaccacaacgacagaagcagctcagaaatgtcctgaagac
ttttgccttcttgttgatcttttagatactgagaaccaacaaaaaaaagttgaactgatg
aagaagaaggatgaactgactgagtctgtaaaagaatgtgataaattatttgataaaatt
cgcaatgaaaaggatttgctcaaaaataacgtcaaagactcaactaagaaagaagtttct
ctgagaaatgagctgaatgaaagaggcataagaacagaacacccattatcaatcacagat
agtaaaagatgcttagagcagaagacatccgaattggaaacaatagagaaaactccaaga
agaatcttttccattcatagaaatttcagcggtcctgacattcttgaaatggttggtgaa
ctggcctttgttgctgatgatgatattgcaagggtcatctcctggcaattgcagggagac
atggactgcatcatcaccacaacgacagaagcagctcagaaacattatgaagacacacag
gggaatcagcaggtcatggccctcgacagtatgtttgtgtatcaggaagacagacccctg
ccacatataagtaaccggcaagaactttttaaaccttctggaaacccaacttttgccagg
aaacacctgatttatcgtgacaaacagctgagttgtgatcgcaataacctgataaaagtg
tttaaaaacctccttggcgacacgattctgatggatgacttaatctcagccaccaactac
agaaaggcgcttgtggagaatcgtatacagtgccccaccatattgacccgaactggggaa
agagtcagtgccaagggcaaatttggaggttcacagaacagagcgccaccgattgacaga
ctgaaaaatgtgtttggagctcctctaccagacaattacgaagaactgaaggaacaaata
gatgtacttcatcggtactgtgcagcagtggaagaaatagaaaaagcagaaaaggatcat
aatgaccattccacaaaatggttcagtgaaattctccaaaaagaaaaagagaaggatgcc
atgactaaggaactagaaaagattaacaaacaacttgcatcagtaccagtgagagcagga
aaacgtgcttctggaaactctgaggagtcacctggcatcgcttcaaagcgtcaaagacgg
ggatctgtggatgagccaggatcattttctgaaatgaactaa
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integrated database retrieval system
