Poecilia latipinna (sailfin molly): 106948321
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Entry
106948321 CDS
T08005
Symbol
brca1
Name
(RefSeq) breast cancer type 1 susceptibility protein
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03440
Homologous recombination
plai03460
Fanconi anemia pathway
plai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106948321 (brca1)
09124 Replication and repair
03440 Homologous recombination
106948321 (brca1)
03460 Fanconi anemia pathway
106948321 (brca1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
plai01009
]
106948321 (brca1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plai04121
]
106948321 (brca1)
03036 Chromosome and associated proteins [BR:
plai03036
]
106948321 (brca1)
03400 DNA repair and recombination proteins [BR:
plai03400
]
106948321 (brca1)
Enzymes [BR:
plai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106948321 (brca1)
Protein phosphatases and associated proteins [BR:
plai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106948321 (brca1)
Ubiquitin system [BR:
plai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106948321 (brca1)
Multi subunit type E3
BRCC complex
106948321 (brca1)
Chromosome and associated proteins [BR:
plai03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
106948321 (brca1)
DNA repair and recombination proteins [BR:
plai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
106948321 (brca1)
BRCA1-A complex
106948321 (brca1)
BRCA1-B complex
106948321 (brca1)
BRCA1-C complex
106948321 (brca1)
BRCA complex
106948321 (brca1)
FA (Fanconi anemia) pathway
Downstream FA components
106948321 (brca1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-Nse
RING_XB3-XBAT31
RTT107_BRCT_5
zf-RING_5
zf-MIZ
zf-ANAPC11
zf-RING_6
zf-rbx1
PTCB-BRCT
zf-RING_10
zf-RING_4
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
106948321
NCBI-ProteinID:
XP_014889412
Ensembl:
ENSPLAG00000011225
UniProt:
A0A3B3U5J1
LinkDB
All DBs
Position
Unknown
AA seq
1315 aa
AA seq
DB search
MATPKATDVRKGISVLWETLQCPICLDLMSAPVSTKCDHQFCKFCITKLLDNSKQNRANC
PVCKFKITKRSLQESPGFQRLVAGLQEMIQAYEHDTCTNYFTGLPQQRKNTKNTETSKHA
CDLSFGDASGFEQDNKGTEHQNDSPQSSSSTVAAQNGFAQLMGLEDSASITAENEGLDSG
LGDVPPTSDKKMSDNLESETANVGKNTTDASKNKRQKRKPEKSSDCLDSTQEESGQQDVQ
KSSRKKQKKDLEHDKILEQKKKKSLEKVAEWLLKVPAEEELELGKPLHSEDESDSSSSTS
TLVVEPKNVESNPQRERRGKALEEQVFGIIYKRRGNKVTEPLMAKEIETCNRSSELKKNN
GRLCEERQIVENDTGSDFFKEPEQMAVEEKLDETVEELNQKESDKYQGEHEVPVADIVQP
ETTPPTRRTRKSLQQPDGDLQDENQLKSKGTNEKSDCRKEKNSKLSRKKPTKVAKPLVLV
EVQDREASPKPSERVKEVEVQIETYPSSEEQTTPVMKSARRSRRLQLFVDKVQGSHKKTT
SEATATKTDKVAKKQSDKTMDATPSKNGNLTKEAKRNGCVSEEDISVIESVGKRGGMSSM
QAEAEIPEALTLAKPECIVSVVPNSTSPTDPSIVGPMLEGEKQENNHPPGSQQETFGNVE
EYEDGKNDSELDTEQLLQSFKAAKRKSFLLGDPNAKRSRGLDVENTEGSQHNCSSSEISE
NINQALKSTCSDVISPSNSPSKIRKPDQALLDASNPNENCPSRSSVSSGLSPNKVAKCDR
DSPLSVVPQVVDSGLRFTGVEQEAETASQSDYNLTEIPGGISKCPSENKTETIFVGESSL
TPAQEVKEANGSGEVSTQSSIQTNKKKKKRKTQRLEYSSESSSSSKEELPTLAQILGTSD
CPQAEIKHQGEISEAIRLEGVGEELLGRPAGSLTPDQLDSSQASVDLFGTPEECDAPENC
VGVSFESSQFSSEVLVTQQKIEMQKELVRLEKLMALVSEVLQEKEGSPAAGTNQGCEDRG
PELGGQDQVQSSDRKGILDAETKASDDKVAERGGFPGPTVQDSTHAESTVKDTKAPNSLS
AAKKAKTCDSPPDCQEDKENNSPPKEKSTAKLVLVSSGLGPNEQIMVKKFAKRVGGRVVS
RVTPEVTHVIMRTDDQLVCERTLKYFLGIAGRKWVVSFQWISECFKEKKLLEEHLFEVRG
DVVNGPNHQGPLRARTAGDSNLLMKGYRICFQGPFTDMSTDELEWMVELCGAAVVKDPLV
LDGEQKSHQIVVVQPRSDSSSSYSGLSRSATVVTRGWLLDSVATYTLQNYSSYTV
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccaaaggccacagatgtcagaaagggaatctcagtcctctgggaaactctt
caatgtcccatttgcctggatttaatgtctgcaccggtttctactaaatgtgatcaccag
ttttgcaaattttgtattacaaagcttttggacaactccaaacagaacagagccaactgc
ccagtgtgtaaattcaagataacaaagaggagcctgcaggagagccctgggttccagaga
cttgttgcaggacttcaggagatgatacaagcatatgaacacgacacctgcacaaactac
ttcactggactgccacagcaaagaaagaacactaaaaatacagaaacaagtaaacatgct
tgtgatttatcatttggagatgcatctggatttgaacaggacaataagggaactgaacac
caaaatgattctccacagtccagctcttcaactgtagcagctcagaatgggtttgctcag
ctcatgggacttgaagattctgcgtctataacagcagaaaacgaaggtctggatagtggc
ctgggtgacgtcccaccaacatctgacaagaaaatgtcagataacttagagtcagaaacg
gcaaatgttgggaaaaacacaacggatgcgtctaaaaacaaaaggcagaagcggaaaccg
gagaagtcctctgactgtttagattcaactcaagaggaatctggtcaacaggatgtccaa
aagtcctctagaaagaaacagaaaaaggatttggagcacgacaagattcttgagcagaaa
aagaagaaaagtttggagaaagtcgcagagtggctcctcaaagttccagccgaagaagag
ctggaactagggaaacccctccacagtgaagacgaatcggatagcagttcgtctacatca
acgctggtcgttgagccgaaaaacgtcgaatcgaatcctcagagagaacgtcgcggcaaa
gcccttgaagagcaggtttttggcatcatctacaagcgaagaggaaacaaagttaccgaa
ccactaatggctaaagaaatagaaacttgtaatagatcttcagagctgaagaagaacaac
ggccgtctttgtgaagagcgacaaatagtagaaaatgacaccggcagtgacttttttaaa
gaaccggaacagatggcagtcgaggaaaagcttgatgaaactgtggaggagttgaaccag
aaagaaagcgacaaatatcagggggaacacgaggttcctgttgctgatatcgtacaaccg
gaaactacaccaccaacgagaaggactcgcaaaagtctgcaacagcctgatggcgattta
caagacgaaaatcagctgaaatcaaaaggtaccaacgagaaaagcgattgtcggaaagaa
aaaaattctaagttaagcagaaagaaaccaactaaggtggcaaaacctcttgtgttggtt
gaagttcaggatagggaagcaagtcctaaacccagtgaaagagttaaagaagtcgaagtt
caaatagagacttatcccagcagtgaggaacagacaactccagtcatgaagagcgccaga
agaagcagaaggcttcagctttttgttgacaaggttcagggaagtcacaagaaaacaacc
tctgaagctactgcaactaaaacagacaaagttgctaaaaagcaatctgataaaacaatg
gatgctactccatctaaaaatggaaaccttacgaaggaagctaaaagaaacggatgtgtt
tctgaggaggatatcagcgtgatagaaagtgtaggaaagaggggaggaatgtcttcaatg
caagctgaagcagagatacccgaagcgctaacgctagctaaacctgagtgtatcgtctct
gtggtcccgaactccacaagtccaaccgatccatccattgtcggtccaatgcttgaaggt
gagaagcaggagaataatcacccacctggctctcagcaggaaacatttggtaacgttgaa
gagtacgaggatggcaagaacgacagcgagctggacacagagcaacttctccaaagcttc
aaagctgccaaacggaaatctttccttcttggggaccccaacgcaaagagaagtcgcggt
ttggatgtagaaaacactgaagggagccaacataactgttcaagctctgaaatatcagaa
aatataaaccaggctttaaaatcgacttgtagtgacgtgatttccccttccaactcgccc
agtaagattagaaaaccagatcaagctctactggacgcctccaaccctaatgagaactgt
ccatccaggagcagcgtcagcagcggtctcagtccaaacaaagtggcaaagtgtgacaga
gacagtcctttgtctgtcgtccctcaggtcgtggactctggcctccgcttcacaggtgtt
gagcaggaagcagaaacggcttcccagagcgactacaacctgacggagatcccaggcggc
atttcaaaatgtccttcagagaacaaaactgagacaatttttgttggagaatcttcttta
accccagcccaagaggtcaaggaagccaacggcagcggagaagtcagcactcaatcctcc
atccagaccaacaagaagaagaagaagaggaagactcagaggctggagtattcatccgag
tccagcagctcatctaaagaggagttaccgactttggcccagatcttgggaacatcagat
tgtcctcaagctgagattaaacatcagggagaaatcagcgaagccatcagattggaggga
gtcggtgaggaactgctgggtcgtccagctggaagtctgaccccagatcagctcgactcc
agccaggcatccgtcgacttgttcggcacacctgaggaatgtgacgcccctgaaaactgc
gtcggcgtttcctttgaatcgtcacaattctcaagcgaagttcttgttactcagcaaaag
atagaaatgcagaaggagctggtgaggctggagaagctgatggctctcgtgtcagaggtg
cttcaggagaaagaaggcagtcctgctgcaggaaccaatcagggctgtgaagacaggggc
cctgaactgggtggccaggatcaagtccagagttcagacaggaagggtattttagatgca
gaaaccaaagcatctgatgataaggtggcagagcgtggtggcttcccaggacctactgtt
caagattcgactcatgctgaatcaactgtaaaagacacaaaggcccctaattcactttct
gcagccaaaaaggcaaaaacttgtgattcacctccagattgccaagaagacaaagaaaac
aacagccctccgaaagaaaaatctacagctaaactagttctggtgtcgtccggattgggc
ccaaacgagcagataatggtgaaaaagtttgccaagagagtcggcggtcgcgtcgtttcc
cgggtgacaccagaggtgacgcatgtcataatgcgcacagatgatcagctggtctgcgaa
cggacactgaaatacttccttggcatcgcgggtcggaaatgggtcgtcagcttccagtgg
atttctgaatgcttcaaggaaaagaaactgttggaagagcatttgtttgaagtgagaggc
gatgtggtgaacggaccgaaccaccaggggccgttaagagcccgcaccgcaggggacagt
aatctgctcatgaagggatacaggatctgcttccaggggccgtttaccgacatgtcgaca
gatgagctggagtggatggtggagctgtgtggcgctgctgtagttaaagacccacttgtc
cttgacggcgaacagaagtcccaccagatcgtcgttgttcagcccagatccgactcgtct
tcctcctacagcggtctgtccaggagcgccacagtcgtgacccgcggttggctgctggat
tcagtcgctacgtacacgctgcagaactacagcagctacaccgtgtga
DBGET
integrated database retrieval system
