Poecilia latipinna (sailfin molly): 106960034 Help Entry 106960034         CDS       T08005                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism plai  Poecilia latipinna (sailfin molly) Pathway plai04115   p53 signaling pathway plai04145   Phagosome plai04148   Efferocytosis plai04350   TGF-beta signaling pathway plai04510   Focal adhesion plai04512   ECM-receptor interaction plai04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:plai00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     106960034   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     106960034  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     106960034    04148 Efferocytosis     106960034   09143 Cell growth and death    04115 p53 signaling pathway     106960034   09144 Cellular community - eukaryotes    04510 Focal adhesion     106960034   09142 Cell motility    04820 Cytoskeleton in muscle cells     106960034  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:plai04131]     106960034   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:plai00536]     106960034 Membrane trafficking [BR:plai04131]  Endocytosis   Phagocytosis    Opsonins     106960034 Glycosaminoglycan binding proteins [BR:plai00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    106960034 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_ADAMTS VWC2L_2nd EGF_3 TSP1_CFP_C EGF_CA cEGF EGF TSP1_CCN Motif Other DBs NCBI-GeneID:  106960034 NCBI-ProteinID:  XP_014908434 Ensembl:  ENSPLAG00000000531 LinkDB All DBs Position Unknown AA seq 1172 aa AA seqDB search MMLRGIFFLLMLWSCDGARLAESRDDNSVYDLFELARVSKRHNGVSLVKGSDPYSPAYKV LNADLIPPVPDASFRDLLDSIQAERGFLLLLNLKQSKKTRGSLLTVEKTDGSGPIFEIIS NGKANTLDLVYSTERQLQVVSIEDAGLANGHWRNLTLFIQDDRAQLFVGCEEINVSELDV PIQTLLSRELADRARLRIGKGAVKDKFMGVLQNVHFVFGTSLDAILTNKGCKSGAALTQM MTLDNPVNGSSPAIRTDYTGHKSKDLQTVCGFSCEDITSMFKELRGLNVIVKQLSNELQK VSTDSELLKNQIIIRNEVCIHNGIEYNDKDEWTVDGCTECTCQNSATICRKISCPLIPCA NATVPDGECCPRCGTPSDFPEGGWSAWSDWTHCSVTCGRGIQQRGRSCDRINSKCEGTSV QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVMTQIRLCNSPTPQMGGRDCQGEG RHTKVCQMSPCPINGEWGPWSPWDTCSATCGGGVQTKKRLCNDPMPKYGGKDCIGDATMV QICNKQDCPIDGCLSNPCFPGTKCTSFRDGSFECGKCPLGYIGDGITCTDIDECKEVPDA CHTHNGIHRCENTEPGYNCLPCPSRFSGPQPFGRGVEQATAKKQVCTPRNPCKDGSHNCH KNANCIYLGVYSESMFRCECKPGYAGNGRICGEDSDLDGWPNTDLPCVENATYHCKKDNC PNLPNSGQEDHDKDGLGDECDQDDDNDGIPDDRDNCPRVYNPAQYDADRDDVGDRCDNCV FEANTDQTDTDNNGEGDACAVDIDGDGILNENDNCPYVYNVDQRDTDRDGVGDHCDNCPL EHNPDQVDSDSDRIGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDDKDNCRLAFNPDQLDSDGDGRGDICKDDFDQDNVLDIHDVCPENFEISETDFR RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYDEFSAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYTVMWKQITQTYWSHTPTRAQGYSGLSIKVVNSTTGPGEHLRN ALWHTGDTAGQVRTLWHDPKNIGWKDFTAYRWHLTHRPKTGLIRVVMYEGKRIMADSGNI YDKTYAGGRLGLYVFSQEMVYFSDLKYECRDT NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgatgctgcgtggcatcttttttctgttgatgctttggagttgcgatggtgccagattg gcagagagtcgcgatgataacagtgtgtatgacctatttgagctggcgagggtgagcaaa agacacaacggagtgagtctagtcaaaggctcagacccttacagtcccgcatacaaggtc ctgaacgcagacctgatccccccagtccccgacgcctccttcagggacctcctcgactcc atccaggccgagcggggattcctcctactacttaacctgaagcagtccaagaaaactaga ggcagcctgctgacagtcgagaaaaccgacggatctggccccatcttcgagatcatttct aacgggaaggcgaacactcttgatctggtctactccaccgagaggcagctgcaggtggtg tccatcgaagatgccggcttggccaatgggcactggagaaacctcacgttgttcatccag gacgacagggcacagctttttgtgggctgtgaagagatcaatgtgtcagagctggacgtg ccaatccaaactttactgtccagggagttggcagatagagcccgactcaggattggaaag ggggcagtaaaggacaagtttatgggagtcctccagaatgtccattttgtctttggaacc tctctagatgccatactgaccaataagggatgtaaaagtggagctgcattaacccaaatg atgaccctggacaacccagtcaatggttccagtcctgccattagaaccgattatactggc cacaaatccaaagatctccagactgtctgcggtttctcatgtgaggatattaccagtatg tttaaggagctcaggggactcaatgtgattgttaagcagctgtcaaatgaactccaaaaa gtgtccactgatagcgagttactgaaaaatcagatcatcatccgcaatgaagtctgcatc cataacggcattgagtacaacgacaaagatgaatggacagtggatggctgcacagagtgc acctgtcagaactctgcaaccatatgtcgcaaaatctcctgtcctctcatcccctgcgcc aatgccactgtgcccgatggggaatgctgcccacgctgtggaacaccgagtgactttccc gagggtggttggtctgcctggtctgactggacccattgttctgtgacttgtggacgtgga atccagcagcgtggacgttcctgtgaccgcatcaacagcaagtgtgagggcacctctgtc cagacccgtgactgctacccacaggaatgcgacaagcgcttcaagcaggatggaggctgg agccactggtcgccctggtcttcatgctctgtgacctgtggcgaaggggtcatgacacag attcgtctctgcaactcccccacaccgcagatgggtggcagagactgccaaggagaggga cgtcacaccaaagtctgccaaatgtcgccctgtcctattaatggagaatggggaccttgg tcgccatgggatacctgctctgcaacctgtggtggaggagtccaaacaaaaaaacgtctc tgcaatgaccccatgcctaaatacggaggaaaagattgcattggcgatgctaccatggtt caaatctgcaacaaacaggactgccctattgatggttgcctttccaacccatgcttccct ggtacaaagtgtaccagcttccgtgatggctcatttgagtgtggcaagtgcccacttggc tacattggtgatgggattacctgcacagacattgatgaatgcaaagaggtcccagatgct tgccatactcacaatggaatccatcgttgtgagaacactgagccaggttacaactgcctc ccctgtccttcccgtttctctggtccccaacctttcggaagaggcgtcgaacaggcaact gctaaaaagcaggtgtgcactccccgcaatccatgcaaggatggtagccacaactgccat aaaaatgcgaactgcatatatttgggcgtctactccgagtcaatgttccgttgtgagtgc aagccaggatatgccgggaatggtcggatttgtggagaggacagtgacctggatggatgg cctaacactgatctgccgtgtgtggagaacgccacttatcactgcaaaaaggataactgc ccgaaccttcccaactctggccaggaagaccatgacaaagatggccttggggatgaatgt gaccaggatgatgacaatgatggaattcccgatgatagggataactgtccaagagtgtac aaccccgcccagtatgatgcagacagggacgatgttggtgaccgctgtgacaactgtgtg tttgaggctaatactgaccaaacagacacagacaacaatggagagggagatgcctgtgct gtcgacattgatggtgatggtattctgaatgagaatgacaactgcccatatgtgtacaat gttgaccagagagacacagacagggatggtgttggagatcactgtgataactgtcccctc gagcacaacccagaccaggtagactctgactcagaccgtattggagacaagtgcgacaac aaccaggacattgatgaggatggtcaccagaacaacttggataactgcccatacattccc aatgccaaccaggccgaccatgacaaagatggcaaaggtgatgcttgcgaccatgatgac gacaatgacggcattcctgatgataaagacaactgccgattggcttttaaccctgatcag ctggactctgatggtgatggccgtggagatatttgcaaggatgattttgaccaagacaat gtcctggacatccatgatgtttgccctgagaactttgagatcagtgaaacagacttccgc agattccagatggttcccttggatcccaaaggcacctctcagattgaccccaactgggtg gtgaggcatcaaggcaaagagctggtgcagactgtcaactgcgatcccggcattgctgtt ggttatgatgagttcagtgccgtggatttcagtggaacgttcttcatcaacacggacaga gatgatgactatgccgggttcgtgtttgggtaccagtcgagctcccgcttctacacagtg atgtggaaacagatcacacagacttactggtcccacacacccaccagagctcaaggctac tctggcttgtcaatcaaagttgtaaattccaccacagggcctggcgaacacctcagaaac gctctgtggcacaccggagacactgcaggacaggtccgtactctgtggcacgaccccaag aacattggctggaaggactttaccgcctatagatggcacctaacccacagacccaagact ggacttattagagtggtcatgtatgaaggcaagagaatcatggcggattctggaaacatt tatgataagacatatgctggtgggcgactaggcttgtatgtcttctctcaggagatggtt tacttctcagacctcaaatatgaatgtagagatacataa

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