Poecilia latipinna (sailfin molly): 106960060
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Entry
106960060 CDS
T08005
Symbol
arhgef1
Name
(RefSeq) rho guanine nucleotide exchange factor 1 isoform X1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai04270
Vascular smooth muscle contraction
plai04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
106960060 (arhgef1)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
106960060 (arhgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plai04131
]
106960060 (arhgef1)
Membrane trafficking [BR:
plai04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
106960060 (arhgef1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
106960060
NCBI-ProteinID:
XP_014908464
Ensembl:
ENSPLAG00000007901
LinkDB
All DBs
Position
Unknown
AA seq
1041 aa
AA seq
DB search
MSIIGAEDEDFENDLADSADDKCPHFDSIDLLKKRPTHLLVFMQHVILQFDPAPLLCYLH
ADIVKNLNARDTKKQFPEFYNNFLEKGAILRVSMPSSLSFELDRTRPELLSDDTQRRYAA
DVQKFQTAEVAKQLEDFRQKRMMGMTLCEEQVMDVENHYPTDRVPLEMKEKSVAENLLEK
MFDSQLTFVPDEDKCQAVFSAVAAYMKHLEVKNRAGDSKKSKRGFPWIKQKNHDPQKSKI
RGFHVPTWIGGSTVEGKPKDPEVDKDPKGREIKGVSGRGSLTETPVPSAKKPENTASAPN
AEPAGNNLTPTTTEPTPADGLSGLGSLELPSPPDGPLPEIGPGVSVVEHSSPHDTHPEES
DRERRKPSRKVGRSESARVDRHSSRRRGSSRKQSRSRSDVDLQPPSSATSPAPLSPQHLH
PLDGPAFPSEVPGQPPTSPSPQLEEIDPRLQELEQDPPSWRVQASSDTLKNLGKKETKRQ
EVINELFATEHAHVRMLSVLQWVFAKPLEREEILSALDLETIFPSLEEIIDMHYTFYESL
KKLRVSDNYVVKNISPTLLNRFGGPEGEWFQKLTARFCSYQTYALDQIKQRQKKDARFNA
FIQEAESKPQCRRLQLKDIIPTEMQRLTKYPLLLENIAKNTEEKEEKESIQQSAECCRKI
LNHVNEEVKTMGNMLTLKEYQKKLDTSGLKASVELYAEYKSIDLTQRKMLFEGPLVWRVT
KEKAIDVHCLLLDDMLVLAQKQEDKMLLKCQSKSNMTAQEGKQMLSPIIKLDSVFLREVA
TDRKAFYVIFTWDSGAQIYELVAQSVAEMKTWHDIIKSTVEVLKKNGTPMRLSIPHGVGV
TPLSPTTLIAPLNPSENGSLRGSSDQERDSVTGHTAVHGGLKLIEMLTDRGFVHVLDHSS
RNQEKVADGALDEVMSLKRLLIGSISLSEDSQPEEEHEEEQPEKPSDETEAPQPAEESEC
TDSGYMQVNASPSTKEDGAKQEDEDGSISAPLVLSQERRDEVCRRLDSLLQMIQRLQAVE
EEHHKLSEVLSEFSLEGANFQ
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcatcggggctgaagacgaggacttcgagaacgatttagcagattcagcagat
gacaaatgcccacacttcgacagcatcgacttgttgaagaaacggccaactcacctgctg
gtgttcatgcagcatgtcattctccagtttgaccctgcgcccttgttgtgctatcttcac
gctgacatcgtgaagaacctcaatgccagagacaccaagaaacagtttccagagttctac
aacaacttcctggagaagggtgctattctcagagtgtcgatgccatccagtttatccttt
gaattggaccgaactcgcccagaattgctgtcagatgacacccaaaggcgttacgctgca
gatgtccagaaatttcaaactgcagaagtagccaaacagctggaagatttcaggcaaaaa
aggatgatgggtatgaccctctgtgaggagcaggtgatggacgtggagaatcactatccc
actgaccgcgtcccgttggaaatgaaggagaagtctgtggccgagaatctgttggagaag
atgtttgattcacaacttacttttgtcccagatgaggataagtgccaagccgtcttttct
gcagtggctgcctacatgaagcaccttgaagtcaaaaacagggcaggagatagtaaaaag
tccaaaagaggtttcccttggattaagcagaagaatcatgatcctcagaaatccaagatt
cgggggttccatgttcccacctggattggaggcagcacagtcgaaggcaaaccaaaagat
cctgaagtggacaaagatcctaagggaagggaaattaaaggggtttctggcagaggctcg
ttgaccgaaactccagttccttccgccaaaaaacctgaaaacacagcctcagcgccaaat
gcggagcctgccggcaacaacttgacccccaccaccacagagcccaccccagccgatggt
ctctcaggtctcggttccttagagctcccctcgccgccagacggaccccttccagagatc
ggacccggggtttctgtcgttgagcacagctccccccacgacactcacccagaggagtcg
gacagagaaagacggaagccaagcaggaaagtaggacgcagcgagagcgcccgcgtggac
cggcactcgtctcggcgtcgtggctcttctcgtaaacagtctcgctcccgtagcgacgtg
gacctgcagcctccgtcttctgcaacaagtcctgccccgctgtccccgcagcacctccat
cctttggatggaccagctttcccttctgaagtgcctggccagcccccgacaagcccgtcc
ccacagttggaggagattgacccccgcctgcaggagttggagcaggacccgcccagctgg
agggtgcaggcgtcttctgacaccttaaagaacctcggcaagaaggagaccaagaggcag
gaagtcataaacgagttgtttgccacagagcatgcccacgtgagaatgctgagtgtcctt
cagtgggtgttcgccaagccgctggagagggaggaaatcctctctgccctggaccttgag
accattttcccaagcctcgaggaaatcattgacatgcactataccttctatgaaagcctg
aagaaactgcgtgtcagtgacaactacgttgttaaaaacatcagccccacattgctcaac
aggtttggtgggcccgaaggagaatggtttcagaaactgacggccagattctgcagttac
cagacctatgctctggaccagatcaagcaaagacagaagaaagacgctcgctttaacgct
tttatacaggaggcagagagtaaaccccagtgccgcagactgcagctcaaagacattatt
cccacagaaatgcagaggctaacaaagtatccactgttgctggaaaacattgcaaagaac
acagaggaaaaagaggagaaggagtcgatccagcaaagcgcagagtgctgcagaaagatc
ctcaaccatgtcaatgaagaggtcaaaacaatggggaacatgttgactctaaaggagtac
cagaaaaaactggacacatcggggctgaaagccagtgttgagctttatgctgaatataag
agcattgacttgactcagaggaagatgctttttgaaggtccgctggtctggagagtcacc
aaagagaaggctatcgatgtgcattgcctgctgctggacgatatgctggttcttgcacag
aagcaggaggacaagatgttgctaaaatgccagagtaaaagtaacatgactgcacaggag
ggcaagcagatgctgagcccaattataaagctggactctgttttcctccgtgaagtggca
acagatcggaaggctttttatgtgatattcacatgggacagtggtgctcagatctacgag
ctggtggctcagtctgttgcagaaatgaaaacttggcatgatataataaagtcaacggtt
gaagttctgaagaagaatgggacacccatgcggttatctattcctcatggagttggggtg
actcctctcagtcccaccacgctcattgccccgttgaatccatctgagaatggaagttta
agaggcagcagtgaccaagaaagggacagtgtgacaggtcacaccgctgtccatggaggg
ctcaagctgatagagatgttgaccgacaggggcttcgttcatgtgctggatcactccagc
aggaaccaggagaaggtggctgacggcgctttggatgaagtcatgtcactgaaaagactg
ctgatcggcagcatcagtctgtcagaggactcgcagcccgaggaagaacacgaagaggag
caaccggagaagccttctgatgaaacggaggcccctcagccagcagaagaaagcgagtgt
acggacagcggatacatgcaggtgaacgccagtccttctacgaaggaagatggagcaaaa
caagaagatgaagacgggagcatcagtgcccctctggtcttgtcccaggagagaagggac
gaagtatgcaggaggctggacagcctgctgcaaatgatacagagactacaggctgtggaa
gaggagcatcacaagctgagcgaggtcctttctgagttctcgctggaaggcgccaacttc
cagtaa
DBGET
integrated database retrieval system
