Poecilia latipinna (sailfin molly): 106960788 Help Entry 106960788         CDS       T08005                                  Symbol thbs1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism plai  Poecilia latipinna (sailfin molly) Pathway plai04115   p53 signaling pathway plai04145   Phagocytosis plai04148   Efferocytosis plai04350   TGF-beta signaling pathway plai04510   Focal adhesion plai04512   ECM-receptor interaction plai04518   Integrin signaling plai04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:plai00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     106960788 (thbs1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     106960788 (thbs1)    04518 Integrin signaling     106960788 (thbs1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     106960788 (thbs1)    04148 Efferocytosis     106960788 (thbs1)   09143 Cell growth and death    04115 p53 signaling pathway     106960788 (thbs1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     106960788 (thbs1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     106960788 (thbs1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:plai04131]     106960788 (thbs1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:plai00536]     106960788 (thbs1) Membrane trafficking [BR:plai04131]  Endocytosis   Phagocytosis    Opsonins     106960788 (thbs1) Glycosaminoglycan binding proteins [BR:plai00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    106960788 (thbs1) SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C VWC2L_2nd EGF_3 TSP1_ADAMTS EGF cEGF TSP1_CCN Motif Other DBs NCBI-GeneID:  106960788 NCBI-ProteinID:  XP_014909604 Ensembl:  ENSPLAG00000006570 LinkDB All DBs Position Unknown AA seq 1169 aa AA seqDB search MKVTGICLLLMLCSCDGARVAESRDDNSVFDLFELIRVPSKNHGVTLAKGDDPYSPAYKI LNPDLIPPVPESAFRDLIDSVYVEKGFLLLLNFKQFKRTRGSLLTVEKRDGSGPVFEIVS NGKANTLDIVYSTENKQQVVSIEEVDLATGGWKNITLFVQEDRAQLFAGCEEVNTVELEA PIQNILTQGTAASAQLRVGKGAVNDRFMGVLQNVRFVFGTTLDAILRNKGCQSAAPSETM IVTNLNGSSAIRTEYTGHKTKDLQMVCGFSCEDLISMFKELKGLGVVVKELSNELRQLTN ENKLIKNHTGLHRGVCIHNGILRKNKDEWTVDDCTECTCQNSATVCRKISCPLIPCANAT VPDGECCPRCGTPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINNICEGTSVQTR DCYLQECDKRFKQDGNWSHWSPWSSCSVTCGSGVITRIRLCNSPTPQLGGRGCVGEGRQT ETCEKSPCPINGNWGPWSPWGTCTLTCGGGVQSRKRLCNDPAPLHGGKECVGDAIDRQMC NKKACPIDGCLSNPCFSGAKCSSFPDGSWKCGKCPVGFTGNGIKCKDVDECKEVPDACFE FNGVHRCENTEPGYNCLPCPPRYSGPQPFGKGVEQAAANKQVCTPRNPCLDGSHDCNKNA RCNYLGHFSDPMFRCECKPGYAGNGHICGEDTDLDGWPNADLVCVENATYHCKKDNCPNL PNSGQEDYDKDGTGDACDDDDDNDGIPDDRDNCPFVYNPRQYDYDRDEVGDRCDNCPYNS NPDQTDTDNNGEGDACAVDIDGDGILNEKDNCPYIYNVDQRDTDLDGVGDMCDNCPLEHN PDQVDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDDDND GIPDDKDNCRLAFNPDQLDSDGDGRGDACKDDFDQDNVPDIYDVCPENFDISETDFRKFQ MVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYHEFNAVDFSGTFFINTERDDD YAGFVFGYQSSSRFYVVMWKQITQTYWSSKPTKAQGYSGLSIKVVNSTTGPGEHLRNALW HTGNTAGQVRTLWHDPKNVGWKDFTAYRWHLIHRPRTGLIRVVMYEGKKIMADSGSIYDK TYAGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3510 nt NT seq  +upstreamnt  +downstreamnt atgaaggtgacaggaatatgtttgctattgatgctttgttcctgtgacggtgcgagagtc gcagagagtcgagacgacaatagtgtgtttgatttgtttgagctcatccgagtccccagt aagaaccacggggtcaccctggcgaaaggagacgacccgtacagccccgcctacaagatc ctcaacccggaccttatccccccggtccccgagagcgccttcagggacctgattgactcg gtctacgtcgaaaaaggcttcctacttctcctcaacttcaagcagtttaaacggaccagg ggcagcctcctgaccgtggagaagcgagacggctccggacccgtcttcgaaatcgtctcc aacggcaaggcgaacaccctggatatcgtttactccaccgagaacaagcagcaggtggtt tccatcgaggaggtggacctggccactggtggctggaagaatatcacgctgttcgtgcag gaggaccgagcgcagctgttcgcaggatgcgaggaggtgaacaccgtggagctggaagcg cccatccagaacatcctgacgcaaggcactgcggccagcgcgcagctccgggtcgggaag ggagcagtgaacgacaggttcatgggggtgctgcaaaacgtgcggtttgtgtttggaaca acgctggacgcgatcctgcgcaacaaaggatgccagagcgctgctccaagtgagacgatg attgtgactaacctgaacggctcttctgccatcagaacagagtacactggacacaaaact aaagacctgcagatggtgtgtggcttctcctgtgaggatctgatcagcatgttcaaggag ctgaaaggcctcggcgtcgtggtcaaggagctgtccaatgagctccgccaactgacaaat gagaacaagcttattaagaatcacactggcttacatagaggcgtctgcatccacaacggc attttgcgcaagaacaaagacgaatggaccgtcgatgactgcactgagtgcacttgtcag aactctgccactgtgtgccgcaaaatctcctgccctctgatcccgtgtgccaacgccacc gtccccgatggcgaatgctgtcctcgttgtggaacaccgagtgactatgctgaggacggc tggtcgccctggtctgaatggactcattgttctgtgtcatgtgggcggggcatccagcag cgtggccgctcttgcgaccgtatcaataatatctgcgagggcacctcagtgcaaacccgc gactgctacctccaggagtgtgacaagcgcttcaagcaggacggaaactggagtcattgg tcaccctggtcgtcgtgctccgtcacctgtggttctggtgtcatcactcgtatccgcctc tgcaactcccccacccctcagctgggaggcaggggctgtgtgggagagggccgacaaact gagacgtgcgagaagtctccatgtcccattaatgggaactggggaccctggtcaccttgg gggacgtgcaccctcacctgtgggggtggagttcaaagtcgtaagcgcctgtgcaatgat cctgccccactgcatggtggtaaagagtgtgttggtgatgccatagacagacagatgtgc aataagaaagcttgcccaatagatggatgcttgtccaacccttgcttttctggagccaag tgctctagtttccccgatggttcctggaagtgtggaaaatgcccagttggcttcacagga aatggcataaagtgcaaagatgttgatgagtgcaaggaggttccagatgcgtgctttgag tttaacggcgtgcaccgctgtgagaacacagagccaggatacaactgtctgccctgccct cctcgctactcaggaccccaaccgtttggcaaaggagttgagcaagctgctgctaacaaa caggtgtgcacaccccgtaatccttgcctcgatggaagccatgactgcaacaaaaacgct cgctgcaactacctgggacacttttccgaccccatgttccgctgcgagtgcaaacccgga tatgctggcaatggtcacatctgtggagaggacacggatttggacggatggcccaatgcc gatctggtctgtgtggagaatgccacctaccactgtaaaaaggacaactgtcccaatctt ccaaactcggggcaggaagattatgataaggatggaactggagacgcatgtgacgatgac gatgacaatgatggtattcctgatgacagggacaactgtccgttcgtgtacaatcccagg cagtatgattatgaccgcgatgaagtaggggaccgctgcgataactgtccttacaacagc aacccagatcagacagacacagacaacaacggcgagggagatgcctgcgctgtggacatc gatggagatggaatactgaatgagaaggacaactgtccctacatatacaacgttgaccag agagacacagatttggatggagtgggagacatgtgtgataactgtcctctggaacataat cccgatcaggtggattcagatgatgatcgagtgggagacaagtgtgacagtaaccaggac atcgatgaggacggacaccagaacaacctggacaattgcccatatatccccaatgccaac caggctgatcacgacaaggatggcaagggagatgcctgtgaccatgatgatgacaacgac ggcatccctgatgacaaagacaactgcagactggccttcaaccccgaccagctggattct gatggcgatggtcgtggagacgcttgcaaagacgactttgaccaagacaacgttcctgat atctatgatgtttgtcctgagaactttgatatcagtgagacagacttccgcaagttccag atggttcctctggatccaaaaggcacctcccagattgatcctaactgggtcgtccggcat caaggcaaagagctggttcagactgtcaactgcgatcctggcattgcagtcggttaccac gagttcaacgccgtggacttcagtggaactttcttcataaacacagagagagacgacgat tatgccggctttgtgttcggctaccaatccagttccaggttctacgtggtgatgtggaag cagatcacgcagacctactggtccagtaaacccaccaaggcccagggatactcaggcctg tccatcaaagtagttaactccaccaccggcccaggagagcaccttagaaacgctctctgg cacacgggcaacaccgcaggacaggtccgcactctctggcacgaccctaaaaatgtcgga tggaaagacttcactgcctacaggtggcatctgattcacaggccaagaaccggactgatc agagttgtgatgtatgagggtaagaagatcatggcagattccggtagcatctatgacaag acgtacgcaggtggcaggctaggtctttttgtcttctcacaggagatggtttatttctca gacctcaagtatgaatgcagagatgcataa

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