Poecilia latipinna (sailfin molly): 106962118
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Entry
106962118 CDS
T08005
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1-like
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
plai
Poecilia latipinna (sailfin molly)
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plai03036
]
106962118
03400 DNA repair and recombination proteins [BR:
plai03400
]
106962118
Chromosome and associated proteins [BR:
plai03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
106962118
DNA repair and recombination proteins [BR:
plai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
106962118
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCHD1_S5
HATPase_c_3
SMC_hinge
HATPase_c
Psb28
Big_1
Motif
Other DBs
NCBI-GeneID:
106962118
NCBI-ProteinID:
XP_014911799
LinkDB
All DBs
Position
Unknown
AA seq
1956 aa
AA seq
DB search
MINVYNYLPNYQQGLKKTLKFGLELADFLVLVYREFGLPPWQKICLVTTDRTVVDHDKFK
ELQDNSTLYLLQSKDQDLQVAAEEAINFVPHYNTLIESGTFEYFAEGQKSLPCSLAELVD
NSLSATAKNTGVRTIEIRLLFDKTFAVVVLDNGCGMTSKQLNNWAVYRLSKFTRENSTFE
SEREGYTRPEPVRRSLNSDISYFGVGGKQAAFHIGNSVRMITKPRNSPDVHELVLSKDEF
EKKEKNKEDVYKGTILNRKPGDFSHITHEESYLQDIIKEETRKESFTAVVITGVCPDHIK
YLKDDFHEWTRRLAHIYHYYIHGVDGNHKMDQSQKSDVGPKIDILVTLREKPPKGLRQKN
LREVQDDLQTLYINSAVDTFEFKATTSDGGSLDGILRYHPFLYDKETYPKDPSAPQVSVE
EDDDENQSGTMNRARGKRDIFECFWNGRLIPYTTISEFDWCRWPNKSTLPLECFSRFSGV
LFTNDKFRVNASKQKFMDLELKLRHRDTHFTPVFNVQKALKNRNIQKEFMQWLEKCHSQF
DKQVKFLGYSKTVTRTDVSTKKMQQPWAVFSAIELDGKTYKAGDLVKSQRTQPIYYGKVN
KFFLYGDHKGNVFATGGEVEITRVPEALYDGYTRTIPISKIDRSATIESIKRNIESDIDK
LPEKLCVTWPDGNALPQHAVIPAGTPLGPLAVEILNRNDKSISSRIQTGVQGGGIKLNVG
LKIFLRGAKEVKQPKQICHFRAPYIPGHGHWFKKIGSLTNLGNYTLTLQAEISDNANNKA
ITSYGGRQLPSYEHKFTVKEGNAENFTIGPLNPSLRIGVPFSIPTQMTDIYGHPTKPPPN
LRPVLECSDLEVSFETTATSGNSFTIKGVKVIGEVQNYQQTKRFDLKVTLPGLKNQTQTI
KISPFPGNPHSLLVKPEVKPVKVENGNPASFNVEVHDEAGNITANAKQIVRCQIPGLKLA
VTDCSSSGTGQIVTEPINLKIINGEPQMLQAKFDMPSQKHVVAVTTELKVMPSCRVSRME
LFCEGEERLELKNNEKIQWQAGGVLENLFFKLYDESGKKVEVTPEIASNIKVNWTGDIDQ
RALIMGRLPDVQVPTKVQEERFHQVSYRDHSVSFSFTIVPCPDEPARLKATVPENTVKLG
ECVTTPIKLKLVDQYDNVTNSLTSDCVTSMAVEAEGLDKSNIAFIWEESSGSIKVSGVRF
NSGPLGTREVCFICGDYTEQINFKVTAGIPTKLKLLSGPEMPLQILNGTGISTPFVVQLC
DKWGNPSPDQRVVVETRASPSTVKVTTSVTSQPVDAEGKAAFTVTNVKGLKGYYQLEFVG
CFNRKPIPGPHVNFNIIPDPNKPDKLSVNYDTSARFLAGGTFPVFSVAVLSDAGSAMTAF
KSADLSMWYWSGESMTRPETATMLMCSKPMENDNKSRYYFRDKKIPQSVGTYTIQFSLKI
EKTEVVFSNQIIVNVVANQPVKLGPECQPQIPVVSYSRYIANRTLVENMTLKIMDQYGNP
TGQNLNGKVLVSIKCPDGEQSRNLPVLEVASTVELNLKDGSTHIERLAIRENSPGENGRK
YILIFKPEVVMSPTSLSPFELPFHFYDDSESQRKVSELTKKKDELTDNYEKLNNKCTVLA
RLRELHTKNVLDANKKEEALKRGLEESKIQVLQPSSIQNIDSLLQQNADEKKTIEDINRR
VFPLPNRSGPDILGMVGHLAHISNDKAAWVISWHLSSEMDCVITKTTAEAQRIFRSEHGR
QQVMALDSIYVHPRREGPLPHIKNGRELFSPVGNPLYARNLLIYTTEEESCERVFKNILG
NTILMDDIESATNYRKAVIEKGNYCPTILTRDGNRLSASGKFGGAQNKAPHEDRVKRFGA
PLPQRYYDLQKERELLIQFRSALEKKKDEDDKRNTTILKLSETRQQMEETKAELDEIERR
LASVRSGKRGPEDISDPSGLMIKRPRRRTGDLPETF
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atgattaatgtgtacaactatctacccaactaccaacaggggttgaagaaaactctgaaa
ttcggtttggaactagccgactttctggtacttgtatacagggaattcggtcttcctcca
tggcaaaaaatttgtttggtaacaacagacagaacagttgttgatcatgacaaatttaag
gagcttcaggataacagcaccctctacttgttgcaaagcaaggaccaagaccttcaagtg
gcagctgaggaggccatcaactttgttcctcattacaacacgctaatcgagagcggaaca
tttgagtactttgccgagggccaaaaatcactgccctgctctctcgctgagctggtggac
aactctctttcggctacagctaagaacacaggagtcaggacgatagagatccggctgctt
tttgacaaaacttttgctgtcgttgtgttggacaatggatgcgggatgacctccaagcag
ctcaataactgggctgtttacagactctctaagttcacaagggaaaacagcacatttgaa
agtgaaagagagggttacactcgtcctgaacctgtacgtcgcagtctcaacagcgatata
tcctactttggagttgggggtaaacaagcagcattccacattggaaactcagtcagaatg
atcaccaaaccaagaaactctccagatgttcatgagctggttctatcaaaggacgagttt
gagaaaaaagagaagaacaaagaggatgtttacaaagggaccatcttaaacaggaagcct
ggtgacttctcgcacataacacacgaggagagttaccttcaagacatcatcaaggaggaa
accaggaaggaaagcttcactgctgttgttataacaggagtctgtcctgatcacatcaaa
tatctaaaagatgattttcatgagtggaccagacggctagcgcacatttatcattattac
attcatggagtcgacggaaaccacaaaatggaccagtctcaaaaatcagatgtcggtcca
aaaattgatattctggtaactttgcgggagaaacctcctaaaggtttacgtcagaagaat
ctgagagaagtgcaggatgacttgcagaccctgtacataaactcagctgtagacacattt
gagttcaaggccaccacttccgacggcggctccttggacgggatcctgagatatcatcca
tttctttacgacaaggagacctaccccaaagatcccagtgctcctcaagtatctgttgag
gaagatgatgatgagaatcagtccggaaccatgaatcgggccagagggaagagggacatc
tttgagtgtttctggaatggacgactcatcccttacaccacaatttccgagttcgattgg
tgccgttggcccaataaaagtacattgcccctggagtgtttcagccgcttctctggggtg
cttttcaccaacgacaaattccgggtcaatgccagcaaacagaagtttatggacttggag
ctgaaactgaggcacagggatacccacttcacccctgtttttaacgttcagaaagcctta
aaaaatcgaaacatccagaaagagttcatgcagtggcttgaaaaatgtcacagtcagttt
gataagcaggtaaagttcctcggctattcaaagactgtgacacgaactgatgtgtccact
aagaagatgcagcagccctgggcggtgttctctgctattgaattggatggcaaaacatac
aaagcaggggatcttgtgaaatctcagagaactcagccgatttattacggcaaagtgaat
aaatttttcctgtatggagaccataaaggaaatgtttttgccaccggcggagaagtggaa
atcacgcgtgtgccagaggcgctttatgacggttacaccaggactatacccatctctaag
attgaccggtctgctacaattgaaagcattaagagaaacatcgagagcgacattgacaag
ttgccagaaaagctgtgcgtcacatggcctgatgggaatgctttgccacaacatgccgtt
attcctgctgggactcctttagggcccttagctgtggaaattcttaacagaaatgacaaa
tcgatctcatccaggattcaaacaggggttcaaggtggagggataaaactgaatgttggg
ctcaaaatattccttcggggtgccaaagaagtcaaacaacccaaacagatttgtcatttc
agagccccgtatatacctggtcatggacactggttcaaaaaaattggttccctgaccaat
ctggggaattacactctgactctacaagctgagataagtgacaacgccaacaacaaggcc
ataacatcctatggcggcagacagcttcccagctacgagcacaagttcacagtcaaagag
ggaaatgcagagaactttactattggtccactgaacccatctctgcgcatcggagtgccg
ttcagtattcccacacagatgaccgatatttatggccaccccacaaaacctcctccaaat
ctccggcctgttcttgaatgcagtgatttggaagtgagttttgagacaacggccaccagt
gggaacagctttaccatcaaaggtgtcaaagtcataggggaagtccagaattaccaacag
accaagagattcgacctgaaagtgactctgccagggttgaaaaaccaaacacagactatc
aagatcagtccctttcctggcaatccacattcccttcttgtgaaaccggaagtaaaacca
gtgaaagtggagaatggaaacccagctagttttaatgttgaagttcatgatgaggctgga
aacatcaccgccaacgccaaacagatagttcgctgccagattccagggcttaagttggcg
gtgacagactgcagcagctcaggaaccggccagattgtgacggagcctataaacctgaaa
atcatcaacggagagccacaaatgctgcaagctaaatttgacatgcctagtcagaagcat
gttgtagctgtcacaacagagctgaaggtcatgccaagctgccgagtctcacggatggag
cttttctgtgagggggaggaaaggctggagctgaagaacaatgaaaagatacagtggcaa
gctggaggggtgctggaaaacctgttttttaagctctatgatgagtctggcaagaaggtg
gaggtcactcctgaaatagcctccaacatcaaggttaactggacaggagacattgatcag
agagctttgataatgggaagactgccggatgttcaggttcctacaaaagtccaggaagag
cgattccaccaggtctcctaccgggaccacagtgtgtctttcagctttaccattgtgcct
tgtccagatgaaccagcgcgactgaaggcaactgttcctgagaacacggtgaaactcggg
gaatgtgtcaccacacccataaagttgaagcttgtggaccagtacgacaatgtcaccaat
agcctgacctctgattgtgtgacttcaatggctgtggaagctgagggtctcgataaatcc
aacattgcattcatatgggaggagagcagcggctctattaaagtctctggagttcgtttc
aactcgggtcctctggggaccagagaagtttgcttcatctgtggcgactacacagaacaa
atcaactttaaagtgacggccgggatccccaccaagcttaaactcctcagtgggcctgag
atgcctttgcagatcttgaatggtacaggtatttccacgccgttcgtcgtgcagctgtgt
gacaagtggggaaacccttccccagaccagagagtggtggtggagacgagagcttcaccc
tcaacagtaaaggtgacgacatctgtcacttcacaacctgtggacgcagaaggaaaagca
gcctttacagttactaatgtgaaagggttaaaggggtactatcaactcgaatttgtgggg
tgctttaacaggaaacccatccctggtccacatgtgaacttcaatatcatccctgatccc
aacaaacccgacaaactttcagtaaactacgacacaagtgccaggtttctcgctggaggc
acattccctgttttctctgtggccgtgctgtctgatgcagggagtgcgatgacggctttt
aagtctgctgatttgtccatgtggtattggagtggagagtcaatgacacgtccagaaaca
gccactatgctgatgtgcagtaaaccgatggagaatgacaacaaatcccgttattacttt
agagataaaaaaatcccacaaagtgttgggacgtacaccatacagttctccctgaagatt
gaaaaaacagaagtcgtgttcagtaatcagatcattgtaaatgtagtggccaatcaaccc
gtcaagttaggaccagaatgtcagccacaaatcccagttgtttcctacagcagatacatc
gccaaccgaactttagttgagaacatgactctgaagattatggatcagtatggtaatcca
accgggcagaacctgaacggcaaggtgttggtctccataaagtgtcctgatggggagcaa
agcagaaacctccctgtccttgaagtggccagcactgttgaattaaacctaaaagacgga
agcacccacatcgagaggctggcgatcagggagaacagccctggagagaacggaagaaaa
tacattctcattttcaaaccagaagtggtgatgtcgcctacatcgttgagtccttttgaa
cttcccttccatttttacgacgattctgaaagccaacgaaaagtgtctgaattgacgaag
aaaaaggacgagctgaccgataattatgagaaactcaacaataaatgtaccgtgcttgcc
agacttcgtgaattgcatactaaaaacgtcctggatgccaacaaaaaggaggaagccctc
aaaagagggctggaagaaagcaaaatacaagttttgcaaccttcatctatccaaaatatt
gacagtttactccaacaaaacgcagatgaaaagaaaacaatagaggatattaacaggaga
gtgtttcctctgcctaaccgcagtggaccagatatcctggggatggtgggccaccttgct
catattagtaacgataaagctgcttgggtcatctcttggcacctgtcttcagaaatggac
tgcgtcattaccaagacgacggcagaagctcagaggatcttccgtagcgagcatggcagg
cagcaggtcatggccctcgacagcatttatgtgcatccaagaagagaaggacctctacct
cacataaaaaatggccgagaactgttcagtccagttgggaatccgctctatgcgaggaac
ttgctgatttataccaccgaagaggagagctgtgagcgcgtgtttaaaaacatccttggt
aacactattctgatggatgacatagagtctgccaccaattacaggaaggcggttattgag
aaagggaactattgtcccaccatattgacccgggacgggaacaggctcagtgctagtggc
aagtttgggggcgcacagaacaaagcaccacatgaggacagagtgaagaggtttggagcc
cctctacctcaacgctactacgacctgcagaaggagagagagttgctcattcaatttcgt
tcagctttggagaagaaaaaagacgaggatgataagcgtaatactacgatactgaagctt
tctgaaactcgacaacaaatggaggaaactaaggcggagcttgatgagattgaaaggcgg
cttgcatcagtcagatcagggaaacgaggacctgaagacatttcagacccttctggcctc
atgataaaacgcccaagacgaagaactggggatttgccagagacgttttag
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