Plantactinospora sp. BB1: C6W10_26195
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Entry
C6W10_26195 CDS
T05391
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
plat
Plantactinospora sp. BB1
Pathway
plat00300
Lysine biosynthesis
plat00550
Peptidoglycan biosynthesis
plat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
plat00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C6W10_26195
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C6W10_26195
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
plat01011
]
C6W10_26195
Enzymes [BR:
plat01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
C6W10_26195
Peptidoglycan biosynthesis and degradation proteins [BR:
plat01011
]
Precursor biosynthesis
Amino acid ligase
C6W10_26195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Corona_6B_7B
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
AVT39350
LinkDB
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Position
complement(6001736..6003307)
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AA seq
523 aa
AA seq
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MRGGPPDGVGSDAVPGNPRPRAVTPVRLTDLAARVAAESPPDAAELAVTGVTHASGEVHP
GDLYAALPGARRHGAEFVAAAMAAGAVAVLTDPAGAPAAAEAGLPALVVPEPRAVLGELA
SAVYGDPTAGLTVVGVTGTAGKTSTTYLIESGLRAAGEVTGLIGTVECRLGDLVVESVRT
TPEATDLHAMLAAARERGVTAVAMEVSSHALAMGRVGGVRFTVGGYTNFGHDHLDFHADV
DDYFAAKARLFDGRCDVEVLNHDDPALAPLRKPGTVTYSAAGDPTATWWADAVREPGYTQ
TFTAHGPDGLAVEAGVALPGRHNVANALLAIAVLAGAGVDPAVAARGVAACPGVPGRLEL
VAAPGPVRGVVDFAHTPDAVVAALTALRDLTSAGNRLICVLGSGGDRDHGKRSLMGAAAS
AGADLVVVTDDNPRSEEPGVIRAEVRRGAERNGDPDRVREVAGRRAAIDEAVRLAEPGDV
VAVLGKGHERGQEIAGRTYPFDDRVELAAALTARFGNLVEGRR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
gtgcggggtggaccccccgacggggtagggtctgacgccgtgcccggcaatccccgtccc
cgcgccgtgacgccggtccggctcaccgatctcgccgcgcgagtcgccgccgagtcgccc
ccggacgccgccgaactggctgtcaccggggtgacccatgccagcggcgaggtccacccc
ggtgacctctacgcggcgcttccgggcgcccgccggcacggcgccgagttcgtggcggcg
gcgatggcggccggcgcggtggccgtactcaccgatccggccggcgccccggcggcggcc
gaggcggggctgcccgccctggtggtgccggagccgcgtgcggtgctcggcgagctggcc
agcgcggtctacggcgacccgaccgccgggttgaccgtcgtcggcgtcaccggcaccgcc
ggcaagaccagcaccacctacctgatcgagtcggggctgcgggccgccggggaggtgacc
gggctgatcggcaccgtggagtgccggctcggcgacctggtggtggagagtgtccggacc
accccggaggccaccgacctgcacgccatgctcgcggcggcccgggaacgcggcgtcacg
gcggtggcgatggaggtctccagccacgccctggcgatggggcgggtcggcggggtgcgg
ttcaccgtcggcggctacaccaacttcggccacgaccacctggacttccacgccgacgtc
gacgactacttcgcggccaaggcgcggctcttcgacggccgctgcgacgtcgaggtgctc
aaccacgacgatccggcgctcgcgccgctgcgcaagcccggcaccgtcacgtactcggcc
gccggtgacccgaccgcgacctggtgggccgacgcggtccgggagcccggctacacccag
accttcaccgcgcacggcccggacggactcgcggtcgaggccggggtggcgctgcccggc
cggcacaacgtggccaacgcgctgctggcgatcgccgtgctggccggcgcgggcgtcgac
ccggcggtcgcggcccggggcgtggccgcctgcccgggcgtgcccggccggctggaactc
gtcgcggcgcccggcccggtgcgcggggtggtcgacttcgcgcacaccccggacgcggtg
gtggccgcgctgaccgcgctgcgcgacctgaccagcgccggcaaccggctgatctgcgtg
ctcggctccggcggcgaccgggaccacggcaagcgctccctgatgggtgccgccgcgtcg
gccggcgccgacctggtggtggtcaccgacgacaacccgcgcagcgaggagcccggggtg
atccgggccgaggtgcggcgcggggccgagcggaacggcgacccggaccgggtacgcgag
gtggccggccggcgggcggcgatcgacgaggcggtacggctcgccgagcccggtgacgtg
gtcgccgtactcggcaaggggcacgaacgcggtcaggagatcgccggccggacgtacccg
ttcgacgaccgggtggagttggccgccgcgctcaccgcccggttcggcaacctggtggag
gggcgccgatga
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