Palleronia sp. LCG004: RVY76_15610
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Entry
RVY76_15610 CDS
T09465
Symbol
mdeB
Name
(GenBank) alpha-ketoglutarate dehydrogenase
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
plcg
Palleronia sp. LCG004
Pathway
plcg00010
Glycolysis / Gluconeogenesis
plcg00020
Citrate cycle (TCA cycle)
plcg00620
Pyruvate metabolism
plcg00785
Lipoic acid metabolism
plcg01100
Metabolic pathways
plcg01110
Biosynthesis of secondary metabolites
plcg01120
Microbial metabolism in diverse environments
plcg01200
Carbon metabolism
plcg01210
2-Oxocarboxylic acid metabolism
Module
plcg_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
plcg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RVY76_15610 (mdeB)
00020 Citrate cycle (TCA cycle)
RVY76_15610 (mdeB)
00620 Pyruvate metabolism
RVY76_15610 (mdeB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RVY76_15610 (mdeB)
Enzymes [BR:
plcg01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
RVY76_15610 (mdeB)
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Gene cluster
GFIT
Motif
Pfam:
PDH_E1_M
Transketolase_C_1
Transketolase_N
Motif
Other DBs
NCBI-ProteinID:
WOI57675
UniProt:
A0AAU0HRZ2
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All DBs
Position
unnamed1:240590..243256
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AA seq
888 aa
AA seq
DB search
MKATAPLPDIDKVETRDWIDALRDVKLHDGVERARFILRKLEETARVEGLTVGERPFSAY
RNTIPPEAQGEYPGDLEIETRLTAIMRWNALAIVARANAAYGGLGGHIASYASAAEIFET
GFNHFFRAANGDFGGDLVYYQPHSSPGIYARAYLEGRLDLEQLQNYRQEVAGNGLCSYPH
PWLMPDFWQFPTGSMGIGPLNAVYQARYMRYLEARGLARTSDRHVWGVFGDGEMDEPESI
SGLTLAAREGLDNLTFIINCNLQRLDGPVRGNGQIIQELESLFIGAGWNVIKVLWGSEWD
DLFARDTDHVLLRRFSETVDGQYQNLGAKDGDYNREKFFNADPASAALVRDMSEDQIHKL
KRGGHDLRKLHAAFAAAKAHEGRPTVILAKTKKGFGMGGAGESRMIAHQAKKLDREALAQ
FRDRFDLPIPDEDVEALNIVKPDPDSDEMRYLRGRREALGGALPARRRKAPDESVAKLPE
RRAYAGFALDGTDREISTTMAAVRLLSGLLKDKGFGQRVVPIVADEARTFGMDNMFRQIG
IYAPEGQLYEPEDAGSMLYYKEAATGQLLEEGITEAGALSSWAAAATSYSVHAMPMLPVY
IYYSMFGFQRVGDLIWAAADQRARGFLLGATAGRTTLSGEGLQHQDGTSHLIAATIPNCR
AYDPAFAGELAVIFDHGARRMMEEQVDEFYYVTVMNENYPHPAVAEGDEEGILKGLYRIS
QYGEGDLRVNLLGSGTILREVIAAARVLADEFGIASDVFSATSYSELSRDAEAVARLNRL
EPGAGHVPHVATCLNSDGPVIAATDYVRAVSQMIAPHVSQRFVALGTDGFGRSDQRAPLR
AFFEVDAASIALAAIEALVAEGRIDVEVQANAVRRFNLDSAKPAPWTV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccaccgcccccctacccgatatcgacaaggtcgagacgcgcgactggatcgac
gcgctgcgcgacgtcaagctgcatgacggggtggagcgcgcgcgcttcatcctgcgcaag
ctcgaggagacagcgcgagtcgaaggtctgacggtaggcgagcgtcctttctcggcctat
cgcaacacgatcccgcccgaggcacagggggaatatcccggcgacctcgagatcgagacg
cgcctgaccgcgatcatgcgctggaacgcgctcgccatcgtggcccgcgccaatgcggcc
tacggggggctcggaggccatatcgcgagctatgcctcggccgcagagatcttcgaaacg
gggttcaatcacttcttccgcgcggcaaacggggatttcggcggcgatctggtctattac
cagccgcattcctcacccgggatctatgcgcgcgcctatctcgaagggcggctcgacctc
gagcagctgcagaactaccgtcaggaggtcgcggggaacgggctctgctcctatccgcat
ccgtggctcatgccggatttctggcagtttccgacgggatccatggggatcgggccgctc
aacgcggtctatcaggcgcgctacatgcgctatctcgaggcgcgtggccttgcccggaca
tccgaccgccatgtttggggcgtgttcggcgacggcgagatggacgagccggaatcgatc
tcgggcctgacgctcgccgcgcgcgaggggctcgacaacctgaccttcatcatcaattgc
aacctgcagcggctagacgggccggtcaggggcaacggccagatcattcaggagttggaa
agcctcttcatcggagcgggctggaacgtgatcaaggtgctgtgggggtcggaatgggac
gacctcttcgcgcgcgacacggatcatgtactgctccgccgtttttccgagactgtggac
ggacaataccagaatctcggcgcgaaggacggtgactacaaccgcgaaaagttcttcaac
gccgatcccgccagtgccgcactcgtccgcgacatgagcgaggaccagatccacaagctc
aagcgcggcggtcacgatctgcgcaagcttcatgcggccttcgcggcggcgaaggcccat
gagggacggccgacggtgatccttgccaagacgaagaaaggcttcggcatgggcggtgcg
ggggaatcgcggatgatcgcccatcaggccaagaagctcgaccgcgaggctttggcgcag
ttccgcgaccggttcgacctgccgatccctgacgaggatgtcgaggcgctcaacatcgtg
aagcccgatcccgacagcgacgagatgcgctatctccgcggacgtcgcgaggcgctcggc
ggcgcgttgcccgcgcgcaggcggaaggcccctgatgaaagcgtcgcgaaattgccggag
cggcgggcctatgcggggttcgcgctcgacgggacggatcgcgagatctcgaccacgatg
gcggccgtgcgtctgctgagcggtttgctgaaggacaagggcttcggccagcgtgtcgtg
cccatcgtcgcggacgaggcgcggaccttcggcatggacaacatgttccgccagatcggt
atctacgcgcccgaaggccagctatatgagcccgaggatgcgggctccatgctttattac
aaggaagccgcgaccggacagcttctggaagaggggatcaccgaggcgggcgcgctgtcg
tcatgggccgcggcggcgacatcctattcggtccacgcgatgccgatgctgccggtctac
atctactactcgatgttcgggttccagcgtgtgggcgatctgatctgggccgccgcagac
cagcgtgcgcgggggttcctgctcggggcgaccgcggggcgcacgacgctttcgggcgag
gggctccagcatcaggacgggacgagccatctgatcgccgcgacgatccccaattgccgc
gcctacgatcccgccttcgcgggcgagctcgcggtcatcttcgatcacggcgcgcgccgc
atgatggaagagcaggtcgacgaattctactacgtcactgtgatgaacgagaactacccc
catccggcggtggcggagggcgacgaggagggcatcctcaaggggctctaccggatcagt
cagtatggcgagggcgatctgcgcgtgaaccttctcgggtcggggacgatcctgcgggag
gtgatcgcggcggcgagggtcctcgcggacgagttcggcatcgcctcggacgtcttcagc
gcgacgagttattcggagctgtcgcgcgatgccgaggcggtcgcgcggctcaatcggctc
gagcccggcgcaggccacgtgccccatgtcgcgacctgtcttaactcggacggtccggtc
atcgccgcaacggattacgtgcgtgccgtttcgcagatgatcgcgccgcatgtcagccag
cgcttcgtggcgctcggcaccgacgggttcgggcgcagcgatcaacgcgcaccgttgcgg
gccttcttcgaggtcgacgcggcaagcatcgctctcgccgcgatcgaggcgctggtcgcg
gagggccggatcgacgtggaggtgcaggcgaatgcggtgcgccgcttcaacctcgactcc
gcgaagcccgctccctggacggtctga
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