Palleronia sp. LCG004: RVY76_17130
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Entry
RVY76_17130 CDS
T09465
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
plcg
Palleronia sp. LCG004
Pathway
plcg01501
beta-Lactam resistance
plcg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
plcg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RVY76_17130
01503 Cationic antimicrobial peptide (CAMP) resistance
RVY76_17130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plcg02000
]
RVY76_17130
01504 Antimicrobial resistance genes [BR:
plcg01504
]
RVY76_17130
Transporters [BR:
plcg02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RVY76_17130
Antimicrobial resistance genes [BR:
plcg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RVY76_17130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WOI58068
UniProt:
A0AAU0HQT9
LinkDB
All DBs
Position
unnamed2:171683..174820
Genome browser
AA seq
1045 aa
AA seq
DB search
MARFFIDRPVFAWVISILIMGIGILAIRTLPIAQYPQIAPPTVSVSASYPGASAQTVANT
VTQVLEEQMTGLDGLRYFSSTSSSAGTTSITLTFETGTDPDIAQVQVQNRVSQASALLPE
PVQRQGVTVQKSASGFLQVISLISTDGSYDQSDLADYLATNLRDEISRIDGVGSLQVFGA
PYAMRIWLDPSKLSAYGLSTSDVVAAVSEENAQISAGAFGTRPVAGEQQLNATITAQSLL
QTPEDFRQIVLRAETGGGLVLLDDVARVEIGAENYGFESRYNGAPSAGMAISLAPGANAL
DTAVAVEERMEEFANNFPEGIDYVIPYDTTPFVEISIEEVIKTLIEAIVLVFLVMLLFLQ
NLRATLIPTLAVPVVILGTFAVLAVAGFTINTLTMLAMVLAIGLLVDDAIVVVENVERVM
EEDGLSPREATRKSMGQITGALIGIAMVLSAVFVPMAFFGGSTGVIYQQFAITIVSAMAL
SVVVALTLTPALCATLLKPKSHAARRGPFAWFNWGFARVLGGYAGTVGWIVRRPFRTGLI
YVGLAVVMALLFVRTPTGFLPEEDQGILFTIVQGPTGATLDRTVDVIEQIEDYYFTAESE
AVESVFGVGGFGFGGAGQNMGLAFVRLKDWEERKDPSLSAQAVAGRAFGAFSQIRDAMVF
PVVPPSVIELGNVSGFDVYLQARQGQSHDELLDARNQLLGMAAQSDLIASARPNGLEDAA
QFNIDIDWRKAGAMGVSASNVSNLLSTAWAGTYVNDFIDRGQIKRVYVQGEADARSTPTD
LEKWRVRNASGGLVPFSNFADGNWTSGPQGVYRYNGIPSMQLQGSPAPGVSTGEAMAEME
RLAGQLPAGYSLAWTGLSLEERQSGNQAPLLYALSLAAVFLSLAALYESWSIPFAVMLAM
PIGVLGALVGAWLGGFENGVFFQVGLLTVIGLTGKNAILIVEFARDRVADGEALIPATID
AARQRFRPIVMTSMAFSLGVLPLVLSTGAGAGGRNAIGSGVLGGTISATILGVLFVPMFF
VAVARLFSRRSKRADAEPAEAPSTS
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcttcttcatcgacagaccggttttcgcctgggtgatctcgatcctcatcatg
gggatcgggatcctcgccatccggaccctgcccatcgcgcagtatccgcagatcgcgccg
cccacagtctcggtcagtgcgtcgtatccgggcgcgtcggcgcagacggtcgccaacacc
gtaacgcaggtcctcgaagaacagatgaccggtctcgacgggctgcgctatttctcttcc
acctcgtcctcggccgggacgacctcgatcacgctgaccttcgaaaccggcaccgatccc
gacatcgcgcaggtgcaggtgcagaaccgcgtgagccaggcgagcgcgcttctgcccgaa
cccgtccagcgacagggcgtgacagtgcagaaatccgcgtccgggttcctgcaggtgatc
tcgctcatttcgaccgacggcagctacgatcagtcggacctcgccgattacctcgcgacc
aacctgcgtgacgagatcagccgcatcgacggggtgggcagtttgcaggtcttcggcgcg
ccctatgcgatgcggatctggctcgacccctcgaagctctcggcctacggcctgtcgact
tccgacgtcgtcgccgccgtctccgaggagaacgcccagatttcggcgggggccttcggg
acccggccagtggcgggcgagcagcagctcaacgcgaccatcacagcgcaatcgcttctt
cagacgcccgaggatttccgccagatcgtgctcagggccgaaacgggcggcgggctcgtc
cttctcgacgatgtagcgcgggtcgagatcggtgccgagaattacggcttcgaatcccgc
tataacggggcaccgtcggccggtatggcgatctccctcgcgccgggtgcgaacgcgctc
gacaccgccgtggcggtcgaggaacgcatggaggaattcgcaaacaacttccccgagggg
atcgactacgtcattccctacgacacgacgcccttcgtcgagatctcgatcgaggaggtc
atcaagaccctgatcgaggcgatcgtgctggtcttcctcgtgatgctcctgttcctgcag
aacctgcgcgctacgctgatcccaacactcgcggtgccggtcgtaattctcgggaccttc
gcggtgctcgccgtggcgggcttcacgatcaacacgctgaccatgctcgccatggtgctg
gccatcggcctcctcgtcgacgacgcgatcgtcgtggtcgagaacgtcgagcgcgtgatg
gaggaggacggcctttccccgcgcgaggcgacgcgcaagtcgatgggtcagatcaccggc
gcgctcatcggcatcgccatggtcctgtcggccgtcttcgtgccgatggccttcttcggc
ggctcgacgggcgtgatctatcagcaattcgcgatcaccatcgtatcggccatggcgctg
tcggtggtcgtggcgctgaccttgacgcccgcgctttgcgcgacgctgctcaagcccaaa
tcccacgccgcgcgacgcgggcccttcgcgtggttcaactgggggttcgcgcgcgtgctc
ggcggctatgcggggaccgtgggctggatcgtccggcgtccgttccgcacggggctcatc
tatgtggggctcgccgtggtcatggcgctgctgttcgtgcgcacgccgacgggcttcctg
cccgaggaggatcagggcattctctttaccatcgtgcaggggccgacgggtgccacgctc
gaccggaccgtcgacgtgatcgaacagatcgaggattattatttcaccgccgagagcgag
gcggtggaatcggtcttcggcgtgggcggtttcggcttcggcggcgcgggccagaacatg
ggcctcgcattcgttcggttgaaggattgggaggagcgcaaggacccgtcgctgagcgcg
caggcggtggcgggcagggccttcggggcattctcgcagatccgcgacgccatggtcttt
ccggtcgtaccgccatcggtcatcgaactcggcaacgtgtcgggcttcgacgtctacctg
caggcccgccagggccagagccatgacgagcttctggacgcccgcaaccaactcctgggc
atggccgcgcagagcgatctcatcgcgtccgcccggcccaacgggctcgaggatgcagcg
cagttcaacatcgacatcgattggcgaaaggctggcgcgatgggggtttcggcgtcgaac
gtcagcaacctcctgtcgaccgcctgggccggtacctacgtgaacgacttcatcgatcgc
ggccagatcaagcgcgtctacgttcagggcgaagccgatgcccgcagcacccctacggat
ctcgagaaatggagggtgcgaaacgcttccggcggtctggtgccgttctcgaacttcgcc
gacggcaactggaccagcggacctcagggggtctaccgctataacggcattccgtcgatg
cagctgcagggctctcccgcgccgggcgtttccaccggcgaggccatggccgaaatggaa
cggctcgccggtcagcttccggcaggctattccctcgcctggaccggcctgtcgctcgag
gaacggcaatcgggaaatcaggcaccgctgctttatgccctgtcgctcgcggcggtattc
ctgtcccttgccgcgctttacgaaagctggtcgatcccgttcgcggtcatgctcgccatg
ccgatcggggttctgggggccctcgtcggggcgtggctcggcgggttcgagaatggcgtt
ttcttccaggtgggactcctgacggtgatcggcctgacgggcaagaacgcgatcctgatc
gtcgaattcgcccgcgaccgcgtcgcggacggggaggcgctgatccctgcgacgatcgac
gcggcgcgccagaggttccgcccgatcgtgatgacctccatggccttttcgctgggcgtc
ctgccgctcgtgctcagcaccggggccggtgcgggcggacggaacgcgatcggctcgggt
gttctgggcggtacgatctcggcgacgatcctcggtgttctcttcgtgccgatgttcttc
gtcgcggtggcccgtctcttctcccgccgcagcaagcgcgcggatgccgaaccggccgag
gctccatccacgagctga
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