Pleomorphomonas sp. SM30: OHA_1_02679
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Entry
OHA_1_02679 CDS
T05766
Symbol
gdhB
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
pleo
Pleomorphomonas sp. SM30
Pathway
pleo00220
Arginine biosynthesis
pleo00250
Alanine, aspartate and glutamate metabolism
pleo00430
Taurine and hypotaurine metabolism
pleo00910
Nitrogen metabolism
pleo01100
Metabolic pathways
pleo01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pleo00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
OHA_1_02679 (gdhB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
OHA_1_02679 (gdhB)
00220 Arginine biosynthesis
OHA_1_02679 (gdhB)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
OHA_1_02679 (gdhB)
Enzymes [BR:
pleo01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
OHA_1_02679 (gdhB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_HM1
GDH_HM3
GDH_ACT2
GDH_ACT3
GDH_HM2
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
BBE73073
LinkDB
All DBs
Position
1:2934314..2939095
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AA seq
1593 aa
AA seq
DB search
MQIDLDTLEQARIDEAAALATAAGGPERGDFLRVFLARGAAEDVTRYTAAELAGFAAAAM
DDLGAREPGRHRIRIHDPDLGGAGTAHTGVTVVELLNDDMPFLVDSTMLALTEAGMDVRL
LVHPILSVYRDGDGRFTGFAEPGAPGALRESLIHVHVARLPDARARADLAAQLDATLTDV
RAAVADWPAMRERLDGVIAGYRTNPPAALDRDEVAEAVAFLSWLADDNFTFLGMRDYDVD
LAGGEEDRIALKAGSGLGLLADPEVRVLRRGRELVQVTPEIRDFMRRPEALIVTKANVKS
RVHRRAYMDYVGVKHYAADGTLVGELRLVGLFTASAYTRSPLAIPYLRRKAQAVMDRAGF
DPDSHSGKALLNVLESYPRDEIFQIDGETLHDFAIAILQLGERPRIRVLARRDKFDRFVS
ILCFVPRDRYSTEVRIALGEHFRTVFQGRVSAFYPAFPEGTLTRVHFIVGRDGGETPNPA
RADLEAAVATIVRTWADAFQDAVRVRFLPDRARAVAERFAGAFSPAYRAVYGADDAIADI
AELERLTGERRVSLVFRKPTGAAPTEVALKLFHAGGPVPLSLRVPVLEAMGFRVIEERSV
DIAFDGRGVVMHDMALERADGRAIDLARHGEPLRALAMAIWFGAAESDRLDALVVSAGLA
WREIALIRALSRYLQQARIPYEQGYVADALNRQPAIATALVALFRARFDPALAGDRAVAE
ARISAEIDTALDAVASLDDDAILRRLRNLIQAAMRTNFYQLGADGRPRGEISLKFDPHRV
DGLPEPRPFAEIWVYAPEVEGVHLRFGKVARGGLRWSDRPQDFRTEVLGLVKAQQVKNAV
IVPVGAKGGFFPKRLPAGGGREAVFAAGTAAYRRFVSALLDLTDDIHGDHVVAPALTVRH
DGDDPYLVVAADKGTATFSDTANAIADAHGFWLSDAFASGGSAGYDHKKMGITARGAWEA
VKRHFREMDRDIQTSPFTVAGVGDMSGDVFGNGMLLSPAIRLVAAFDHRDIFLDPDPDPA
TSFAERARLFALPRSSWADYDTGRISAGGGVFSRSLKAIPLSAEVQALLGLDKPRATPQE
VMAAILKAPVDLLWFGGIGTYVKAADESDAEVGDRANDAIRVVAGELRAKVVGEGANLGM
TQKARIAYGLAGGRCNSDAVDNSAGVNSSDVEVNFKIALGRAVRDGRLTLPDRNALLETM
TPDVARLVLANNYRQSLCVSLAERRGVAELGQLRRLMHVLEGRGRLDRAVEFLPDDAALA
RREAAGKPATRAEIGVLMAYAKIVLYDDLLAGHVPDEPSQEDELFAYFPAAMREGFADDI
RGHRLRREIVATRLANAVVNRGGPTFVVRLADQTGADTETIVRAFLIGFDAFGLGHLEAA
VDALDTLVPGTVQLDLYTRIQDALTAAALWLLRAGRTAGDPGAVARRLSEGIRRHRAVVA
DRRGDAVDPAEAALIAAGVPEEVARRIAMLDHDLVALDVVAVSEASGASVEQAAAAARAV
SEAFALDLLDGFARRLAPRDYVDGLALDRGRRMLADAFRRIATAAAGGGLDGWLAGRGVD
AERIRAGIADLARGEPSVTRFIVAAGLVADVAG
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcgatctcgacacactcgaacaggcccgcatcgacgaggcggcggcgctggcg
accgcggcgggcgggccggagcgcggcgacttcctgcgcgtcttcctcgcccgcggcgcc
gccgaggacgtgacgcgctacaccgccgccgaactcgccggcttcgccgccgcggctatg
gacgacctcggcgcccgcgagcccggccgccaccgtatccgtatccacgatcccgacctc
ggcggcgcaggcacggcgcacaccggcgtcacggtggtcgaactcctcaacgacgacatg
cccttcctcgtcgacagcaccatgctggcgctgaccgaggcgggcatggacgtgcgcctc
ctggtccacccgatcctgtcggtgtaccgcgacggcgacggccgcttcaccggcttcgcc
gagcccggcgcacccggcgcgctgcgcgagagcctgatccacgtccatgtcgcccgcctg
cccgacgcccgcgcccgcgccgacctcgccgcccagctcgacgccacgctcacggacgtg
cgcgccgccgtcgccgactggccggcgatgcgcgagcggctcgacggtgtgatcgcgggc
taccgcaccaacccgccggcggcgctcgaccgcgacgaggtcgccgaggcggtggcgttc
ctgtcctggctcgccgacgacaatttcaccttcctcggcatgcgcgactacgacgtcgac
ctcgccggcggcgaggaggaccggatcgcgctgaaggccggcagcggcctcggcctgctc
gccgacccggaggtgcgggtgctccggcgcggccgcgaactcgtccaggtgacgccggag
atccgcgacttcatgcgccggcccgaggcgctgatcgtcaccaaggccaacgtcaagagc
cgggtgcaccggcgcgcctacatggactacgtcggcgtcaagcactacgccgccgacggc
acgctggtgggcgaactgcgcctcgtcggcctgttcaccgcgtccgcctacacccgctcg
ccgctggcgatcccgtatctgcgccgcaaggcgcaggcggtgatggaccgcgccggcttc
gacccggacagccattccggcaaggccctcctcaacgtgctggagagctatccgcgcgac
gagatcttccagatcgacggcgagacgctccacgacttcgccatcgccatcctgcaactc
ggcgagcggccgcggatccgggtgctcgcccgccgcgacaagttcgaccgcttcgtctcg
atcctgtgcttcgtgccgcgcgaccgctattcgaccgaggtgcgcatcgccctcggcgag
catttccgcaccgtgttccagggccgcgtctccgccttctacccggccttccccgagggc
acgctgacccgggtccacttcatcgtcggccgcgacggcggcgagacgccgaacccggcg
cgcgccgacctcgaggccgccgtcgccacgatcgtgcgcacctgggccgacgccttccag
gacgccgtgcgcgtccgcttcctgcccgaccgcgcccgcgccgtggccgagcgcttcgcc
ggtgccttctcgccggcctaccgggccgtctacggcgccgacgacgccatcgccgacatc
gccgaactcgagcgtctgacgggcgagcggcgggtgtcgctggtgttccgcaagccgacc
ggcgcggcaccgaccgaggtggcgctgaagctgttccacgccggcgggccggtgccgctg
tcgctgcgggtgccggtgctggaggccatgggcttccgcgtcatcgaggagcgctcggtc
gacatcgccttcgacggccgcggcgtggtgatgcacgacatggcgctggagcgcgccgac
ggccgcgccatcgacctcgcccgccacggcgagccgctgcgcgcgctcgccatggcgatc
tggttcggcgccgccgagagcgaccggctcgacgccctcgtcgtctccgccggcctcgcc
tggcgcgagatcgcgctgatccgggcgctgtcgcgctacctgcagcaggcgcgcatcccc
tacgagcagggctacgtcgccgacgcgctgaaccgtcagccggcgatcgccaccgcgctg
gtcgcgctgttccgcgcccgcttcgacccggcgctcgccggcgaccgcgccgtcgcggag
gcccggatctccgccgagatcgacaccgcgctcgacgcggtcgcaagcctcgacgacgac
gcaatccttcgccggctcaggaacctgatccaggcggccatgcgcaccaacttctaccag
ctcggcgccgacggccgaccgcgcggcgagatctcgctgaagttcgacccgcatcgggtc
gacggcctgccggagccgcggcccttcgccgagatctgggtctacgcacccgaggtcgag
ggcgtgcacctgcgcttcggcaaggtggcgcgcggcggcctgcgctggtcggaccggccg
caggacttccgcaccgaggtgctcggcctcgtcaaggcgcagcaggtcaagaacgcggtg
atcgtaccggtcggcgccaagggcggtttcttcccgaagcgcctgccggcgggcggcggg
cgcgaggcggtgttcgccgccggcaccgcggcctaccgccgcttcgtctcggccctgctc
gacctcaccgacgacatccacggcgaccacgtggtggcgccggccctcacggtgcgccac
gacggcgacgatccctatctggtggtcgccgccgacaagggcaccgcgaccttctccgac
accgccaacgccatcgccgacgcccacggcttctggctgtccgacgccttcgcctccggc
ggctcggccggttacgaccacaagaagatgggcatcaccgcccgcggcgcctgggaggcg
gtgaagcggcacttccgcgagatggaccgcgacatccagaccagcccgttcaccgtcgcc
ggcgtcggcgacatgtcgggcgacgtcttcggcaacggcatgctgctgtcgccggcgatc
cgcctcgtcgccgccttcgaccaccgcgacatcttcctcgatcccgatcccgaccccgcg
acctcctttgccgagcgcgcccggctgttcgcgctgccgcgctcgtcctgggccgactac
gacaccggccggatctcggccggcggtggggtgttctcgcgcagcctgaaggcgatcccg
ctgtcggcggaggtgcaggcgctgctcggcctcgacaagccgcgcgcgacgccgcaggag
gtgatggcggcgatcctgaaggcgccggtcgacctcctgtggttcggcggcatcggcacc
tacgtcaaggcggccgacgagagcgacgccgaggtcggcgaccgtgccaacgacgccatc
cgcgtcgtcgccggcgaactccgcgccaaggtggtcggcgagggcgccaacctcggcatg
acccagaaggcgcgcatcgcctacggtctcgccggcgggcgctgcaactccgacgccgtc
gacaactccgccggcgtcaactcctccgacgtcgaggtcaacttcaagatcgcgctcggc
cgtgccgtccgcgacggccgcctgacgctgcccgaccgcaacgccctcttggagacgatg
acgccggacgtcgcccggctggtgctcgccaacaactaccgccagagcctctgcgtctcg
ctcgccgagcggcgcggcgtcgccgaactcggccagctgcgccggctgatgcacgtgctg
gagggccgcggccggctcgaccgcgccgtcgagttcctgcccgacgacgccgcgctcgcc
cgccgcgaggccgccggcaaaccggcgacgcgcgctgagatcggcgtgctgatggcctac
gccaagatcgtgctctacgatgacctgctcgccggccacgtccccgacgaaccgtcgcag
gaggacgagctgttcgcctatttcccggcggcgatgcgcgagggcttcgcggacgacatc
cgcggccaccggctgcggcgcgagatcgtggcgacccggctcgccaacgccgtggtcaac
cgcggcggcccgaccttcgtcgtccgcctcgccgaccagaccggcgccgacaccgaaacg
atcgtccgcgccttcctgatcggcttcgacgccttcggcctcggccatctcgaggccgcg
gtcgacgccctcgacacgctggtgccgggcaccgttcagctcgacctctacacccggatc
caggatgccctgaccgcggcggcgctgtggctgctccgggcgggtcgcaccgccggcgat
ccgggcgcggtggcacgccggctctccgagggcatccgccgccaccgtgccgtggtcgcc
gaccgacgcggcgacgccgtcgaccccgccgaggcggccctgatcgccgccggcgtgccg
gaggaggtggcgcggcggatcgccatgctcgaccacgacctcgtcgccctcgacgtcgtc
gcggtctcggaggcgtccggcgcctccgtggagcaggcggcggcggcggcacgggcggtg
tccgaggccttcgcgctcgacctcctcgacggcttcgcccgccggctcgccccgcgcgac
tatgtcgacggcctcgcgctcgaccgcggccggcgcatgctcgccgacgcgttccggcgg
atcgccaccgcggccgccggcggcggcctcgacggctggctcgccggccgcggcgtcgac
gccgagcggatccgggcggggatcgccgacctcgcccgcggcgagccgtcggtgacgcgc
ttcatcgtcgccgccggtctcgtcgccgacgtcgccggctga
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