Plectropomus leopardus (leopard coralgrouper): 121941507
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Entry
121941507 CDS
T07454
Symbol
kdm2aa
Name
(RefSeq) lysine (K)-specific demethylase 2Aa isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121941507 (kdm2aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plep03000
]
121941507 (kdm2aa)
04121 Ubiquitin system [BR:
plep04121
]
121941507 (kdm2aa)
03036 Chromosome and associated proteins [BR:
plep03036
]
121941507 (kdm2aa)
Enzymes [BR:
plep01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
121941507 (kdm2aa)
Transcription factors [BR:
plep03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
121941507 (kdm2aa)
Ubiquitin system [BR:
plep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121941507 (kdm2aa)
Chromosome and associated proteins [BR:
plep03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
121941507 (kdm2aa)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
121941507 (kdm2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
JmjC
DUF7885
F-box
Cupin_8
PHD
C1_1
LRR_At1g61320_AtMIF1
LRR_4
Motif
Other DBs
NCBI-GeneID:
121941507
NCBI-ProteinID:
XP_042340242
LinkDB
All DBs
Position
4:8250876..8272306
Genome browser
AA seq
1252 aa
AA seq
DB search
MDIPPAIMDDSKPRYSKRLRAGTRRRYHDDGISDEEIDGRRTFDLEEKVVSERFSSDRVL
RMLGKDLTYEFVQRGGLRDPIIFEKPDGLGIKMPDPDFSVNDVKMFVGSRRMIDVMDVST
QKGTEMSMAQWTRYYETPPCQREKLYNVISLEFSHTKLENLVKRPTTVDLIDWVDNMWPR
HLKERQRDSTNSINDMQYPKVQKYCLMSVEGCYTDFHIDFGGTSVWYHILRGSKVFWLIP
PTPQNLELYENWVLSGKQGDVFLGDRATDCQRIELKQGCTFIIPSGWIHAVYTPVDSMVF
GGNFLHSFNIPMQLNICNIEDRTRVPLKFRFPFYYEMCWYVLERYVFSMTKTSYLTPEFQ
KHTLGIGLKKPPSSDPASEQVKEEEQDDGSDEEDSEQQSEKPAVKVHLTPLELEGMWNLL
GKLEALPSNKKCVPAGIHNAPALITHIKALLKEHANDNPKLSYTGKPIIRWPKRPSWYQP
PPPPPPPPRPKLATTPIVPRPQKPASSMSVLRRRRVRCKRCEACMRPECGDCNFCRDMKK
FGGPGKLKQTCVLRQCLSPGLPLSAVCEICKEPNQEETGDPSLTLMECSNCAQIVHPACL
TVQGEGVVNKDLPSCWECPKCVQGITDQESKGEKGEGLPAKRKSSTLLDARMAKIYRRHR
HSRDGDDSASDDDDEASQRRKMLHARGGSHSSRRGFSANRRGLLRGGSAHRGNRGGIMTP
GSSSVLRLKRGIGMRDGARRGRGVRLRGGSRMQRRGDESEDSDDDDDDDEEEEEEEEDSE
DGDKERLQRRRRRRRRTDDDEDEDEDSEGQDFDPEEEEMDTLEDEEEEEEDVEEEGRWDS
DPEPPVLLVSDLNDDLLSGSYLTVTLQRPHKAKRHSGSIVPKLEAAMGLRTAAVGAGGQQ
GFIQRKTALSKPSRLKGGDATADSATPRGPGRPRLRGNHGDKGTRDHSATSSEEENAAPS
SAPSSLSPPSLLSLPSFKDVGNERGGEKEVWVSVFKYLNRAELLACMTVCKAWYKWSCDK
RLWSHVDVSRCSPLSNQALAGIIKRQPTSLDLSWTPLAKRQLNCLLTRLPGLRELRVTGL
SWSCLSAMVSPTLPYLRLLDLRWCEGIKDAQIKELIIPPGSESSRSRLRNMVTLRLSGLD
ISESTLRLLQRHMPQLERLDLAHCKEITDSSITLLAAAGTHSRNSLTELTLAGCNELTDG
CLSYLKRLSSLTLLDLRGCKSISRRACDAFISDLSHVALFCMMEEKLIQRLD
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggacatacctccggcaataatggatgactccaagccaaggtacagcaaaagactgcgg
gccggtactcggcgacgataccatgacgatggcatctcagatgaggagattgatggaaga
aggacgtttgatctggaagaaaaagtcgtcagtgagaggttcagctctgaccgggtcctg
cgcatgctggggaaagacttgacatatgagtttgttcagcgaggcggtctgagagacccg
atcatctttgagaagcctgatggactcggaatcaagatgcctgatccagacttcagtgtc
aatgacgtcaagatgtttgttggtagcagacgtatgatagatgtgatggatgtgagcact
cagaaggggacagagatgtccatggctcagtggacacggtactacgagacccctccgtgt
cagagggagaagctctataacgtcatcagcctggagttcagccacaccaagttggagaac
ctggtcaagagacctaccacagtcgatctaatagactgggtggacaacatgtggcctcgt
catctgaaagagagacagagagactcaaccaactctatcaatgacatgcagtaccccaaa
gtacagaaatattgtctgatgagtgtcgagggctgctacacagacttccacatagacttt
ggagggacgtcggtgtggtaccacatactcagagggagcaaggtgttttggctgatccct
cccacgcctcagaacctggagctgtatgagaactgggtgctgtcggggaaacagggagac
gttttcctgggagaccgagcgactgattgccagaggattgaactgaagcagggctgcacc
ttcatcattccctctggttggattcatgccgtctacacccctgtggactccatggtgttt
ggaggaaacttcctgcatagcttcaacatcccaatgcaacttaacatctgtaatatagaa
gacagaacgcgggttccactgaagtttcgtttccccttctactacgagatgtgctggtac
gtgttggagcgctatgtcttcagcatgacaaagacctcctacctcacaccagagtttcag
aaacacacactgggcatcggtctgaagaagccgcccagctcagatccagccagtgagcag
gtgaaagaggaagagcaggatgatggcagtgatgaagaggattcagagcagcagtctgag
aagcctgcagtgaaagttcatctgactcccctcgagctggagggaatgtggaacctgctg
ggtaaactggaggctctgccctccaacaagaagtgtgtcccagcgggcatacacaacgcc
ccagcactcattacacacatcaaggctctactgaaggaacatgccaatgacaatcccaaa
ctgtcctacacaggaaaacccatcatcaggtggccaaaaagaccctcatggtaccagcct
cctcctcctccaccgcctcctcctcgtcctaaattggccaccactcccatcgtcccacga
ccacagaaaccagcctcctccatgtctgtgctgagacgccgcagggtcaggtgtaagcgc
tgtgaagcctgtatgagaccggagtgtggagactgtaacttctgcagagacatgaagaaa
tttggaggaccagggaagctcaagcagacctgtgtgctacgacagtgtctctctccgggt
cttcctctgtctgcagtttgtgagatctgcaaggagcccaatcaagaggaaactggagac
ccctccctcacgctgatggagtgctccaactgtgcacagatcgtccatcccgcttgcctc
acggttcagggtgaaggagtagtgaacaaagacctgcctagctgctgggagtgtccaaag
tgtgtccaaggaatcactgaccaagagtccaaaggagagaaaggtgaaggcctcccagcg
aagcggaaatcctccaccctgctggatgctcgtatggctaagatttacagacgacacaga
cacagtcgtgatggagacgactctgccagtgatgacgatgatgaagcctcccagagaaga
aagatgctccatgcccgaggggggagccactcctccaggaggggcttcagtgccaacagg
agaggcctgctgagaggaggctcggcccacagaggaaacagaggaggaatcatgactcct
ggctcctcctccgtcctcaggctgaagcgagggataggcatgagggacggtgcacggagg
ggacgaggggtgaggctgaggggaggctccaggatgcagcgaagaggagacgagtcagag
gattcggacgatgacgacgatgatgacgaggaagaggaggaggaagaggaggacagtgag
gatggagacaaagaacgactgcagcgtcgccgtaggaggaggcgcaggactgatgatgat
gaagatgaggatgaggacagtgaggggcaggactttgaccccgaagaggaggagatggac
acgctagaagatgaagaggaggaagaagaggatgtggaggaggaaggacgctgggattca
gacccagaaccgccggtcctcctggtgtctgatctgaatgacgacctgttgagtggctcc
tacctgacggtcactctgcagcgcccccacaaggccaagagacactctggctccatagtt
ccaaagctagaagcagcgatgggtctgaggacggctgcagtgggtgctggaggtcagcag
ggcttcatccagaggaagacggctctgtccaaaccgtcacgactgaagggcggtgacgcc
acagctgacagtgcaacgccaagaggacccgggaggccacgtctccggggtaaccatggc
gacaaaggcactagggatcactctgcgacttcctcagaggaagagaacgctgctccttct
tctgcgccctcctccttgtctcctccatccctgctgtctctgccgtccttcaaagacgtg
ggcaacgaaagaggaggggagaaggaggtgtgggtgtcagtcttcaagtacttgaacaga
gcggagctgctggcctgcatgaccgtctgtaaagcctggtacaagtggagctgtgacaag
cgtctgtggagccacgtggacgtgagtcggtgcagcccgctcagcaaccaggccctagca
ggcatcattaaacgccagcccacctctctggacctgtcctggacccccctggccaagaga
cagctcaactgtctgctcaccaggctcccaggtctgagggagttgagggttaccggtctg
tcctggtcctgtctgtcagcgatggtctctcccactctgccctacctgcggctgctggac
ctgcgctggtgtgaaggcattaaagatgcccagattaaagagctcatcattccgcctggt
tcggagtcgtctcgcagtagactgaggaacatggtgacgctgcgtctgtccggtctggac
atcagtgagtccactctgaggctgctgcagcgccacatgccccagctggagaggctggac
ctcgctcactgcaaagaaataacagactcgtccatcaccctgctggcagcggccgggact
cacagccgcaacagcctcactgaactcacactggcaggttgcaatgagctgacagacggc
tgtctgtcctacctgaagcgtctctcctctctgacgctgctggacctcagaggctgtaag
agcatcagcaggcgcgcctgtgatgccttcatctctgacctgtcccacgtcgccctcttc
tgtatgatggaggaaaaactcatccagcgcctggattaa
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integrated database retrieval system
