Plectropomus leopardus (leopard coralgrouper): 121941636
Help
Entry
121941636 CDS
T07454
Symbol
smcr8b
Name
(RefSeq) guanine nucleotide exchange protein smcr8b
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121941636 (smcr8b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121941636 (smcr8b)
Membrane trafficking [BR:
plep04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
121941636 (smcr8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Imm49
Herpes_DNAp_acc
Motif
Other DBs
NCBI-GeneID:
121941636
NCBI-ProteinID:
XP_042340396
LinkDB
All DBs
Position
4:19713950..19723223
Genome browser
AA seq
864 aa
AA seq
DB search
MAISVDKDPLPHVGPKPVLTIPDDPRVIGSFDLNHFSVRIMSVDYQASGPCHGPPSSSGP
RLNFSEDSEVVLGDSTENAFAYVHHMTLYDLEARGMVRPFCMAYVCSDQKKLMENFSELS
TSFSRASDSLKTGNRQAFSMELQRKLQELEYSRLTLLQETEVTRMANGLTEDGETVDELE
AVERSISNHKDLLRQVTSYPNRKLKQPDFLPYDPADSLADPTALLPPEPCPSLSTSTSTT
CRSERHLKPLQELCNTYFLSLMKEQLADTERRLRGDRSVLQTARVTRYLSRRLAFINFLF
ELWSPEDGDEEERESCEAELQRAAGSKSGIEMFQSEPLSLESFYSCVEEIPIKLEAGEAG
TVTPDPNVSTEMTGSVSSGDSIEVLGTEKSYRTQHDVTGSDSRETLVGMTDTSRRAAVDS
NVRRVRAYARRANSEDSIEVLSTTESIFPDDLTAITEEEAEHQPLNNGFENDKGILEEFK
SDHVLQETTLMVTTLDNEDENKEPLQKEDGRVDREETIKQVTVNGRIKEEQVIQSLRSHQ
VNEDNSPEKTSKLLQVEEAVESTPQWSEDHQAMQSVPDLHVSFAPPVAPAEADRWSSPCA
PLRLLSVDEASDCTSFTGSSDPPSPTQNVQCNTNSVQRRRRKAGLRALRFLKQNSFSQHA
VFCLLSGRPLVVIGGDESLVKKLVDALSLFLPAPGPDRNAVLPFLTTPLQLTDLLTWRLI
GIHRSSSSSSASILHSLTRYSRYLALLDLDQRTLLCPSYSGSLINRLANPHTSISRGTTY
LLHLESCLTALANQALLYTISPALQRSNTAGRNDGTEGEDLSEYDLRVMHFLCDLIKQRH
TGRGPPVLRFSYSSVQLHRNTYAP
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggcaatctctgtagacaaggacccactccctcatgtgggacccaaacctgtgttgaca
atacccgacgaccctagagtcattggatcgttcgacctcaaccacttctctgtccgcatc
atgtctgttgactaccaggcgtccggcccctgccacggacccccttcatcctcgggcccc
cgcctcaacttcagcgaggactcagaggtggttctgggagactccacagaaaatgcgttt
gcatatgttcaccacatgaccctttatgacctggaggctcggggcatggtgcgtcctttc
tgcatggcgtacgtgtgttcagaccagaagaagctgatggagaacttctccgaactgtcg
acaagcttctctcgggcctctgacagccttaagacgggaaacagacaagcattttctatg
gagctgcagaggaagttacaggagctcgagtattctcggttgactctgctgcaggagact
gaagttacgaggatggccaatgggctcacagaggacggagaaacagtagatgagcttgaa
gctgtagagcgttcaatctcaaatcacaaagacctcctccgccaggtcacgtcttaccca
aacaggaagctgaaacagccagacttcctgccttatgacccggctgactcccttgctgat
ccaactgcgttactgcctcctgagccctgtccctccctctccacctccacctccacgacc
tgcaggtctgagcgccatctgaagccgcttcaggagctttgcaacacttacttcctgtcg
ctgatgaaggagcagctcgctgacacagagcgccgcctacgtggcgacaggagtgtgcta
caaactgctcgtgtcacgcgatatttgtccagaaggctcgcgttcatcaacttcttgttt
gagctttggagtccagaggacggcgatgaggaggagagagagagctgtgaggcagagctg
cagagggcagcggggagtaagagcggcatcgagatgtttcagtcagaacccctgagcctg
gagtccttctactcctgtgtggaggagatccctatcaaactggaggcaggagaagctggg
acagtgactcctgatcccaatgtctccactgagatgacaggaagtgtgagcagcggtgac
agcatcgaagtgctcgggactgagaagtcttatcggacgcagcatgatgtcactggatct
gacagcagagagacactagttgggatgacggacacctccaggagagccgcagtagattca
aacgtcaggcgtgtgcgagcgtacgccagacgagccaacagtgaggacagcatcgaggta
ctgagtaccaccgagtctatctttcctgacgaccttaccgccatcacagaggaagaagca
gagcaccaacctctaaataatggctttgaaaatgacaaggggatactggaagagtttaaa
tctgaccacgtcctccaagagacgacactgatggtgactactttagacaatgaggatgaa
aacaaagagcctcttcagaaagaagacggtcgtgttgacagagaagagacaataaagcaa
gtaactgttaatgggaggattaaagaggagcaggtcatccagtctttgaggagccatcaa
gtcaatgaagacaacagtcccgagaagacgtccaaactactgcaagttgaagaagcagtg
gagtcgacgcctcagtggtctgaagaccatcaggcgatgcagtcggtgcctgaccttcat
gtcagcttcgcccctcctgttgccccggccgaggctgaccgatggtcttcaccctgcgct
cctctcaggctgctgagtgtcgacgaggcctccgactgcaccagcttcaccggctcgtcg
gacccaccctctcccacccaaaatgtccagtgcaacaccaactcagttcagaggaggaga
aggaaggctggactcagagccctcaggttcctcaaacagaactcgttctcccagcatgcc
gtgttttgtcttctgagtggtcggccgctggttgtcatcggaggagacgagagtttggtc
aaaaagctggtggacgctctgagtctcttcctgcctgctcctggtcctgatcgaaacgct
gtgctgccgtttttgaccacgccacttcaactaactgacctgctgacctggaggctgata
ggaatacacagatcgtcctccagctcttcggcaagcattttgcactctctgactcgttac
agccgttatctggccctattggatctggaccagaggacgctgctttgtccgtcatactct
ggctctctcatcaacaggctggctaaccctcacaccagcatcagccgaggcaccacctac
ctgctgcacctggagagctgcctgactgcactggccaaccaggctctcttgtacacaata
agtcctgctttacaacgttcaaacactgctggaaggaacgatggcacggaaggagaggac
ttgagtgagtacgatttgagagtgatgcatttcttgtgtgacctcataaaacagcgccac
acaggacgtggaccaccagttttaagattctcttacagctcagtgcagctgcacagaaat
acatatgcaccataa
DBGET
integrated database retrieval system
