Plectropomus leopardus (leopard coralgrouper): 121941881
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Entry
121941881 CDS
T07454
Symbol
ldlrb
Name
(RefSeq) low-density lipoprotein receptor isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03272
Virion - Hepatitis viruses
plep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121941881 (ldlrb)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121941881 (ldlrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121941881 (ldlrb)
Membrane trafficking [BR:
plep04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
121941881 (ldlrb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
DUF5050
hEGF
Vgb_lyase
TMEM154
Motif
Other DBs
NCBI-GeneID:
121941881
NCBI-ProteinID:
XP_042340754
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All DBs
Position
4:complement(29479194..29496418)
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AA seq
872 aa
AA seq
DB search
MFGMRRLAGLSACCCLLMLIHFAPPADAALACSSTQFKCGNGRCITRKWVCDSSDDCGDG
TDELEETCASKTCLPSEFNCGPPMNKCIPGAWHCDGRAECDNGADESNCTAKQCSPGEFQ
CANGQCISSSFVCDTDNDCTDGSDEASCPKPSCSSGSFQCNNSVCVLAQWRCDGDEDCAD
GSDEWPQTCVGREPKKPAVSCKTHEFQCADRQCIHSYWKCDGSNDCRDGSDEFNCSRPTC
RPDEFQCDDGACIHGSRQCDKKPDCRDGSDEADCHKENVCEGPTMFKCSSGECVSMQKVC
NKQADCRDQSDEPEECDKNECLTSNGGCSHFCNDLKIGYNCSCRAGYSLKMDQKTCEDIN
ECAEADTCGQICINLPGSYKCDCMEGYQIDPVTKTCRAESGTVPTLLFTNKHEVRKMTVG
RSEYVSLITALKNAVALDMDMPNKILFWSDLSLKKIYSSKIDMAGNSSYHTEIIGSDIET
PEGIAVDWIHGNIYWTDSILKTISVATTDGSKRKTLISENLQKPRAITIDPVNNFMYWTD
WGEEAKIEKSGLNGADRVALVTDHIMWPNGITLDMVNQRLYWVDSKMHTLFSIDVNGGTR
HSLIFNEQKLAHPLALTVFEDKVFWTDMTNSAVFSANRLTGNDITQLAMNLVQPEDIILY
HNLKQPNGTNWCRESNNINGGCEYLCLPAPHINERSPKYTCACPDHMAMGPDMRKCVAAA
SVAPPAKKETDAPIPPEAPTKPPAKPRQPVPTTTTTTTRATKKTTTTSSSQPSKQPAASA
QGKILAVGPEEAPSSHPVALYIVLPILVMALLVFGAVLLWRHWRLKNTNTIHFDNPVYQK
TTEDELHICRNSSDGYVYPQRQMLSMEDMDVA
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggatgagaagactcgccgggttgtccgcgtgttgctgtctgttgatgctgatt
cattttgcgcctccagcagatgcagcccttgcatgcagctccactcagttcaagtgtggg
aatgggcggtgtatcacccgtaaatgggtgtgcgatagcagtgacgactgtggggatgga
actgatgaactggaggaaacctgcgcatccaaaacgtgtctgccgtcagaattcaactgc
ggtcctcccatgaacaagtgtataccaggagcctggcactgtgacggcagagctgaatgt
gacaacggagctgacgagagcaactgcacggccaaacaatgcagccctggtgagtttcag
tgtgccaacggccagtgcatatccagctccttcgtttgcgacacggacaacgactgtaca
gatggttcagatgaggcttcctgcccaaagcccagctgcagctctggttcctttcagtgt
aacaactcagtgtgcgtgctagcccagtggcgctgcgatggagatgaggactgtgccgat
gggtccgacgagtggccgcagacctgtgtaggaagggagccaaagaagccagcggtgagc
tgcaaaacccatgaattccagtgtgcagacagacagtgtatccacagctactggaagtgt
gatggaagcaatgactgtcgggatggatcggacgagttcaactgcagtcgtcctacttgt
cgcccagacgagtttcagtgtgatgatggtgcctgtatccatggcagccgccaatgtgac
aaaaagcccgactgcagggatgggagtgatgaggctgactgccacaaggaaaatgtatgt
gaaggccccaccatgttcaagtgcagtagcggggagtgtgtcagcatgcagaaagtatgc
aacaaacaggcagactgcagggaccagtctgatgaacctgaagagtgtgacaagaatgag
tgtttgaccagtaatggtggatgctcccatttctgcaacgacctgaaaattggctacaac
tgctcctgccgtgctggatacagcctgaagatggaccagaagacctgtgaagatattaat
gaatgtgctgaggcggacacttgcggtcagatctgcatcaacctgcccggcagctacaag
tgtgattgcatggagggctaccagatcgaccctgtgacgaagacatgcagggctgagtca
ggcaccgtacccaccctcctcttcaccaacaaacatgaggtgaggaagatgacggtgggc
cgcagtgagtacgtcagtctgataactgcgctgaagaatgcggtggctctggacatggac
atgccaaacaagatactcttctggtccgacctgtctctgaagaaaatctacagctccaag
atagacatggcgggtaactcctcttaccacactgaaataattggcagtgacatcgaaacc
ccagagggcattgcggtggattggatccatggcaacatctactggactgacagcattttg
aagacaatctctgtggcaacgactgacggcagcaagaggaagacccttatctcagagaac
ctgcagaagccaagagccatcacaatcgaccctgtgaataactttatgtactggacagac
tggggtgaagaggccaaaatagagaagagtgggttgaatggagccgatcgtgttgctttg
gtaacagatcacatcatgtggcccaacggtatcaccctggacatggtcaaccagcgtctg
tactgggtggactccaagatgcatactctgttcagcattgatgtgaatggagggacacga
cacagtctcatattcaatgagcaaaagctcgctcacccccttgctctgactgtttttgag
gacaaagtgttctggacagacatgaccaacagtgctgttttcagtgctaatcgcttgaca
gggaatgacatcactcagctggcaatgaacctggtccagccagaggacatcatactgtac
cacaacctcaagcagccaaacggtacaaactggtgcagagagagcaacaatataaatgga
ggatgtgagtatctgtgcctccccgcccctcacattaacgagcgctctcctaaatacacc
tgtgcctgtcctgaccacatggccatgggacctgacatgaggaaatgtgtggcagcagcc
tcagttgccccccctgccaaaaaagaaactgacgcaccaatcccgcctgaagctcccacc
aagccgcctgctaaaccaaggcagcctgtccctaccacaactactactacaaccagggct
accaaaaaaaccacaactacctcatcaagccagcccagtaaacagcctgctgcatcagct
caaggtaaaatattggcagtgggacctgaagaagctccttcttcccaccctgttgctctt
tacatcgtgttgcctatattggtcatggccctgctggtctttggagcagtgttgctatgg
agacactggcgtctgaagaacactaacaccatccactttgacaatccagtgtaccagaaa
accacagaggatgagctacacatttgcagaaacagctctgatggctacgtttatcctcag
aggcaaatgttgagcatggaagacatggatgttgcatga
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