Plectropomus leopardus (leopard coralgrouper): 121943479
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Entry
121943479 CDS
T07454
Symbol
trpc6b
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
plep04040
]
121943479 (trpc6b)
Ion channels [BR:
plep04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121943479 (trpc6b)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
121943479
NCBI-ProteinID:
XP_042342934
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Position
5:27937064..27945084
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AA seq
836 aa
AA seq
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MMLQQAVAKPRRQALRGAGYLYHAQSMSCLSMTEELFLNAAEYGNIPEVRRMLEELPDLN
INCVNYMGQNALQLAVANEHLEVTKLLLRKKDLARIGDALLLAISKGYIRIVEAILSHQA
FADSQRLTNSPSQVDTHDDFFAYDEDGTRFSQDITPIILASQCHEYEIVHILLMKGARVE
RPHDYFCQCRTCSEQQRYDSFSHSQSRINAYKCLASPAYLSLSNEDPVMAALELSNELAV
LANIEKEFKNDYKKLSMQCKDFVVGLLDLCRNTEEVKAILNGDTASCQSSESFGRQNLIR
LKLAIKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTTAIKILLVLGVAVGLPVLSFLYW
IAPSSKLGKLMCGPFLKFVAHAASFMIFLCLLVLNAADRFEGTSLLPNMTTHDHPSQLFR
MKTTPFTWMEILIISWVIGKIWEECKDIWSQDIREYISEPWNLLDFSILAIFMTSFIARL
MAFWHAYSAQCYVDQHYTDLSNMSLPFEIQYFQLARVNWMPSDPQLISEGLYAIAVVLSF
SRIAYILPANESFGPLQISLGRTVKDIFKFMVIFITVFVAFMVGMFNLYSYYLGAKHNDA
FTTLEESFKTLFWAIFGLSEVKSVVINIDHKFIENIGYVLYGVYNIIMVIVLLNMLIAMF
NSSFQEIEDDADVEWKFARAKLWFSYFEQGGTLPVPFNLVPSPRSVISILMGIREYLWDV
PKGKSKENSTDEMELNKLRQQEDLSVEATLNPTCHQDIMNRLIKRYILKAQRDKDNDEIN
EGELKEIKQDISGLRFELLERANHDTETLATLIRQLGDVVHVQQKKGRRNELAIVS
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgatgctacagcaggctgtggccaaacctcggagacaagctttacggggagctggttac
ctgtatcatgctcaatccatgtcctgtctttctatgacagaggaacttttcttaaatgct
gcagaatatggcaacattcccgaagtgaggcggatgctcgaggagctgccagacctcaac
atcaactgtgtgaactacatgggccagaatgcactgcagctggcagttgccaatgagcat
ttagaggtgactaagctcttactcaggaagaaagacttggctagaattggtgatgctttg
ctgttggcgatcagtaaaggatacatccgaatagtggaggcaatattgagccatcaggcc
tttgcagacagtcaaagactgactaacagtcccagccaggtggatacacatgatgacttc
tttgcctatgatgaggacggcacacgtttctctcaggacatcactcccatcatcctggcc
tcccagtgccatgagtatgaaatcgtgcatatacttcttatgaaaggggctcgtgtagag
cggccccacgactacttctgccagtgtaggacctgcagcgagcagcagaggtatgactca
tttagccactcacaatcacgcatcaatgcgtataaatgtctggccagtccggcgtatctg
tccctctccaatgaggacccagtgatggcagctctggagctgagcaatgagcttgcagtt
ctggccaacattgagaaggagttcaagaatgattacaagaagctttccatgcagtgtaaa
gactttgtggtgggactgctggatttgtgtcgaaacacagaggaagtgaaggccatctta
aacggggacacggcatcatgtcaaagctctgagagctttggtcggcaaaacctcatcagg
ttaaaacttgcaataaaatatgaagtgaaaaagtttgtagctcatccgaactgccaacag
caactcctctccatctggtacgagaacttgtctggattgcgtcagcaaaccacagcaatt
aaaatccttcttgtccttggtgtagctgttgggttgcctgtcctgtcctttctgtactgg
atagcaccatcaagcaagttagggaaactcatgtgtggacctttcctgaaatttgtggcc
catgcagcctccttcatgatatttctttgcctactggtcctgaacgcggcagaccgtttt
gaggggacatcgctgctgcccaacatgaccacccacgatcacccctcacaactgtttcgt
atgaagaccacccctttcacctggatggagattctcatcatatcctgggtcatagggaag
atctgggaagaatgtaaagatatttggtcgcaggacatccgggaatatatctcagagccc
tggaaccttcttgacttcagtattttggccatttttatgacctcttttattgccagatta
atggctttctggcacgcatattctgcccagtgttatgttgaccagcactacactgacctg
tccaacatgtccctgccatttgagatacagtacttccaactggctcgagtcaactggatg
ccctccgacccgcagctcatttctgagggtctctatgcaattgcagttgtgctgagtttc
tctcgcattgcgtacatcctgcctgccaatgagagcttcgggcctttgcagatctctctg
ggaagaacagtaaaagacatctttaagttcatggtgattttcatcacagtttttgtagct
ttcatggtgggaatgttcaatctgtactcgtactacctcggggccaagcacaatgatgcc
ttcacaacgctcgaagagagttttaaaactctattttgggccatctttggcttgtcagaa
gtgaagtcagtggtcattaacattgaccataagttcattgagaatatcggctatgttctg
tacggggtgtacaacatcatcatggtgatcgtcctgctgaatatgctcatagccatgttc
aacagctccttccaagaaattgaggatgatgctgatgttgagtggaagtttgccagagct
aaactctggttctcatactttgagcagggcggcacacttcctgtgcccttcaaccttgta
ccaagccccaggtctgtgatttccatcttgatgggaataagagaatatctctgggatgta
cctaaaggcaaaagcaaagaaaattcaactgatgagatggagctgaacaagttgaggcaa
caggaagatctgagtgtggaagcaacacttaatccgacctgccaccaagatataatgaac
cgcctcatcaaaagatacatcttaaaagcacagagagataaagacaatgatgaaataaat
gagggtgagctgaaggagatcaaacaggacatctctggtctccgctttgagctgctggag
agggcgaaccatgacacagagacacttgcgacgctcatcaggcaactgggagacgtcgtg
catgttcagcagaaaaaagggcggaggaatgagctggctatagtttcctaa
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