Plectropomus leopardus (leopard coralgrouper): 121946204
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Entry
121946204 CDS
T07454
Symbol
traf6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04010
MAPK signaling pathway
plep04120
Ubiquitin mediated proteolysis
plep04140
Autophagy - animal
plep04144
Endocytosis
plep04620
Toll-like receptor signaling pathway
plep04621
NOD-like receptor signaling pathway
plep04622
RIG-I-like receptor signaling pathway
plep05132
Salmonella infection
plep05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121946204 (traf6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121946204 (traf6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121946204 (traf6)
04140 Autophagy - animal
121946204 (traf6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121946204 (traf6)
04621 NOD-like receptor signaling pathway
121946204 (traf6)
04622 RIG-I-like receptor signaling pathway
121946204 (traf6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121946204 (traf6)
09171 Infectious disease: bacterial
05132 Salmonella infection
121946204 (traf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121946204 (traf6)
04121 Ubiquitin system [BR:
plep04121
]
121946204 (traf6)
Enzymes [BR:
plep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121946204 (traf6)
Membrane trafficking [BR:
plep04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
121946204 (traf6)
Ubiquitin system [BR:
plep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
121946204 (traf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
TRAF6_Z2
DM
CEP104_ZnF
RING_XB3-XBAT31
TRAF3_RING
U-box
Prok-RING_4
zf-RING_11
zf-TRAF_2
Motif
Other DBs
NCBI-GeneID:
121946204
NCBI-ProteinID:
XP_042346622
LinkDB
All DBs
Position
1:complement(4655440..4663265)
Genome browser
AA seq
571 aa
AA seq
DB search
MACFDSNKGSLEEDSYEGAVGGELSGCALAMLEKERESLLSPSESPGTFISSAASSLQAA
APLQGYDVEFDPPLESKYECPICLMALRNAIQTPCGHRFCKNCIEKSIRDTGQRCPVDNE
RLSEDQLFPDNFAKREILSLTVRCPNAGCAEKMELRHLENHLAQCQFATVPCPQCQQSVR
ISHLEEHTTVECQRRPVSCPDCVAHFVYEERELHEQQCPFASVKCQYCEMDLIRDQMESH
CDTDCPKAPIACNFSTFGCKERMQRHNLAQHMQEFTQMHMRYMAEFLRGLSLNGTTPKSL
WALGPSVSSEDQGAAASVSTCSGPRTAVSCSSNSAPNQPSEEMQRIREMDARLVRQDHQL
RELIILKETQAGHLAELRRRVSMLEDTVKELEAQHCQGIFIWRLKGFSAHMRSQEAGMPV
VEHSPGFYTGRPGYKLCLRLHLQTPNAPRCSNFISLFVHTMQGAYDGQLTWPFQGTIRLA
ILDQGLEGQHHMEVMETKPDLQAFQKPTIQRNPKGFGYVTFLHLHQLSQRAFIKDDTLLI
RCEVTPRFDSSCHREGPAVQPRGHEASVSRD
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcttcgacagcaacaaggggagtttggaggaggacagctatgaaggagctgtt
ggtggagagctgtccggctgtgcgttagcaatgctggaaaaagaacgggaatcccttctt
agcccttcagagagcccaggcaccttcatcagcagcgcagccagtagcctccaggccgct
gcccccctccaaggctatgacgtggagtttgaccctcctctagagagtaaatatgagtgc
cctatctgcctcatggctctgaggaatgctattcaaacaccctgcggtcatcgtttctgc
aagaactgcattgaaaagtccattcgtgacacaggacagaggtgccctgtggacaatgag
agactgtcagaagaccagttgtttcctgataactttgccaaacgggagattctgtcgctt
actgttcgctgtccaaacgctggttgtgctgagaaaatggagctcagacatttagagaat
catttggcacagtgtcagtttgccacggtgccttgcccacagtgccagcagtctgtgaga
attagccacctcgaggagcacacaactgttgagtgccaaaggagaccggtgtcctgtcca
gactgtgtggcacactttgtttatgaagagagagagcttcacgagcagcagtgtcccttt
gccagtgtgaagtgccagtactgtgagatggatctcatcagagaccagatggaatctcat
tgtgatacagattgcccaaaagcacccattgcctgtaactttagcacctttggatgtaag
gaaaggatgcagcgccacaacttggctcagcacatgcaggagttcacacagatgcacatg
cgctacatggccgagttcctgcgtggcctcagccttaacggcaccacacccaaatccctg
tgggcgctaggaccttcggtttcctctgaggatcagggagctgcggcatcagtatcgacc
tgcagcgggcccagaacagctgtgagctgcagcagcaactctgccccaaatcagccgagt
gaggagatgcagaggatcagggagatggatgctcggctggtcaggcaggatcaccagctg
cgtgagctcatcatcttaaaggaaacgcaggccggccatcttgcggagctccggcgtaga
gtgtcgatgctggaggacacagtgaaggagctggaggcccagcactgtcaaggcatcttc
atctggcgcctcaaaggtttctctgctcacatgcggagccaagaggcaggcatgccggta
gttgagcacagccccggcttctacacgggccgtccaggctacaagctgtgcctgcgctta
cacctgcagacccccaacgccccgcgctgctccaacttcatctccctcttcgtccacacc
atgcagggagcctatgacgggcagctgacgtggccgttccagggcaccatccgcctcgcc
atcctagaccaaggcctcgagggtcagcaccacatggaggtgatggagactaaacccgac
ctgcaagctttccagaagcccaccatccagcgcaaccccaaaggattcggctatgtcacc
tttctgcacctgcatcagctgagtcagagggcatttatcaaagacgacactctactcatc
cgctgcgaggtgacgccgcgttttgacagttcatgtcaccgcgagggtccggcggtgcag
cccagaggacacgaggcctcagtttcaagggactaa
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